RNA–Protein interactions for RNA: ENST00000421258.1

TFRC-204, Transcript of transferrin receptor, humanhuman

TSL 3

Gene TFRC, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-204ENST00000421258 CHKB-CPT1BH3BT56 60 aa4.13□□□□□ -1.75
TFRC-204ENST00000421258 SPINT4Q6UDR6 99 aa4.13□□□□□ -1.75
TFRC-204ENST00000421258 LINC00643Q86TS7 51 aa4.11□□□□□ -1.75
TFRC-204ENST00000421258 KRTAP12-1P59990 96 aa4.07□□□□□ -1.76
TFRC-204ENST00000421258 SPATA8Q6RVD6 105 aa4.07□□□□□ -1.76
TFRC-204ENST00000421258 KRTAP5-2Q701N4 177 aa4.03□□□□□ -1.76
TFRC-204ENST00000421258 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
TFRC-204ENST00000421258 SCGB1A1P11684 91 aa4.01□□□□□ -1.77
TFRC-204ENST00000421258 KRTAP12-3P60328 96 aa4□□□□□ -1.77
TFRC-204ENST00000421258 LOC105371267A0A1B0GV96 52 aa3.94□□□□□ -1.78
TFRC-204ENST00000421258 TNP1P09430 55 aa3.94□□□□□ -1.78
TFRC-204ENST00000421258 SEC61GP60059 68 aa3.89□□□□□ -1.79
TFRC-204ENST00000421258 SERP1Q9Y6X1 66 aa3.89□□□□□ -1.79
TFRC-204ENST00000421258 KRTAP6-1Q3LI64 71 aa3.88□□□□□ -1.79
TFRC-204ENST00000421258 A0A1B0GU33 70 aa3.85□□□□□ -1.79
TFRC-204ENST00000421258 A8MU10 97 aa3.84□□□□□ -1.79
TFRC-204ENST00000421258 SNURFQ9Y675 71 aa3.84□□□□□ -1.79
TFRC-204ENST00000421258 MT1AP04731 61 aa3.8□□□□□ -1.8
TFRC-204ENST00000421258 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
TFRC-204ENST00000421258 SPANXA2-OT1Q8N9U9 137 aa3.8□□□□□ -1.8
TFRC-204ENST00000421258 SMIM20Q8N5G0 67 aa3.78□□□□□ -1.8
TFRC-204ENST00000421258 COA5Q86WW8 74 aa3.76□□□□□ -1.81
TFRC-204ENST00000421258 SMIM26A0A096LP01 95 aa3.75□□□□□ -1.81
TFRC-204ENST00000421258 KRTAP5-1Q6L8H4 278 aa3.73□□□□□ -1.81
TFRC-204ENST00000421258 PCP4L1A6NKN8 68 aa3.72□□□□□ -1.81
TFRC-204ENST00000421258 SVIPQ8NHG7 77 aa3.68□□□□□ -1.82
TFRC-204ENST00000421258 J3QR89 54 aa3.65□□□□□ -1.83
TFRC-204ENST00000421258 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
TFRC-204ENST00000421258 KRTAP25-1Q3LHN0 102 aa3.59□□□□□ -1.83
TFRC-204ENST00000421258 SERP2Q8N6R1 65 aa3.59□□□□□ -1.83
TFRC-204ENST00000421258 PCP4P48539 62 aa3.57□□□□□ -1.84
TFRC-204ENST00000421258 A0A0A0MQY5 61 aa3.56□□□□□ -1.84
TFRC-204ENST00000421258 A0A1B0GU69 56 aa3.55□□□□□ -1.84
TFRC-204ENST00000421258 KRTAP9-6A8MVA2 160 aa3.54□□□□□ -1.84
TFRC-204ENST00000421258 A0A1B0GV90 55 aa3.47□□□□□ -1.85
TFRC-204ENST00000421258 MT3P25713 68 aa3.47□□□□□ -1.85
TFRC-204ENST00000421258 PRR15LQ9BU68 103 aa3.34□□□□□ -1.87
TFRC-204ENST00000421258 H7BZZ5 65 aa3.29□□□□□ -1.88
TFRC-204ENST00000421258 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
TFRC-204ENST00000421258 K7ERU9 68 aa3.25□□□□□ -1.89
TFRC-204ENST00000421258 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
TFRC-204ENST00000421258 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
TFRC-204ENST00000421258 UQCR11O14957 56 aa3.19□□□□□ -1.9
TFRC-204ENST00000421258 COX7CP15954 63 aa3.19□□□□□ -1.9
TFRC-204ENST00000421258 K7ERS5 55 aa3.14□□□□□ -1.91
TFRC-204ENST00000421258 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
TFRC-204ENST00000421258 LINC01558Q9Y6Z2 57 aa3.14□□□□□ -1.91
TFRC-204ENST00000421258 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
TFRC-204ENST00000421258 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
TFRC-204ENST00000421258 MIR22HGQ0VDD5 57 aa3.05□□□□□ -1.92
TFRC-204ENST00000421258 RPS28P62857 69 aaKnown RBP3.04□□□□□ -1.92
TFRC-204ENST00000421258 ANAPC13Q9BS18 74 aa3.01□□□□□ -1.93
TFRC-204ENST00000421258 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
TFRC-204ENST00000421258 PRAC1Q96KF2 57 aa2.93□□□□□ -1.94
TFRC-204ENST00000421258 ATP5EP56381 51 aaPredicted RBP2.92□□□□□ -1.94
TFRC-204ENST00000421258 CCDC179H3BU77 68 aa2.91□□□□□ -1.94
TFRC-204ENST00000421258 CDC42SE1Q9NRR8 79 aa2.87□□□□□ -1.95
TFRC-204ENST00000421258 NDUFAF8A1L188 74 aa2.86□□□□□ -1.95
TFRC-204ENST00000421258 Q1T7F1 81 aa2.82□□□□□ -1.96
TFRC-204ENST00000421258 TMEM258P61165 79 aa2.79□□□□□ -1.96
TFRC-204ENST00000421258 ROMO1P60602 79 aa2.78□□□□□ -1.96
TFRC-204ENST00000421258 PSPHP1O15172 72 aa2.72□□□□□ -1.97
TFRC-204ENST00000421258 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
TFRC-204ENST00000421258 V9GYY9 64 aa2.65□□□□□ -1.99
TFRC-204ENST00000421258 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
TFRC-204ENST00000421258 A6NED7 52 aa2.58□□□□□ -2
TFRC-204ENST00000421258 BRK1Q8WUW1 75 aa2.58□□□□□ -2
TFRC-204ENST00000421258 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
TFRC-204ENST00000421258 PRO0628Q9UI54 55 aa2.52□□□□□ -2.01
TFRC-204ENST00000421258 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
TFRC-204ENST00000421258 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
TFRC-204ENST00000421258 PMAIP1Q13794 54 aa2.43□□□□□ -2.02
TFRC-204ENST00000421258 KTN1-AS1Q86SY8 53 aa2.34□□□□□ -2.03
TFRC-204ENST00000421258 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
TFRC-204ENST00000421258 LUZP6Q538Z0 58 aa1.87□□□□□ -2.11
TFRC-204ENST00000421258 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
TFRC-204ENST00000421258 INE1O15225 51 aa1.54□□□□□ -2.16
TFRC-204ENST00000421258 PRM1P04553 51 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms