RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 LINC00208Q96KT6 92 aa2.04□□□□□ -2.08
CSTF1-202ENST00000415828 CYSTM1Q9H1C7 97 aa2.04□□□□□ -2.08
CSTF1-202ENST00000415828 TRAV7A0A075B6U4 112 aa2.03□□□□□ -2.08
CSTF1-202ENST00000415828 TRAV22A0A0B4J277 110 aa2.03□□□□□ -2.08
CSTF1-202ENST00000415828 ATOX1O00244 68 aa2.03□□□□□ -2.08
CSTF1-202ENST00000415828 SPINK7P58062 85 aa2.03□□□□□ -2.08
CSTF1-202ENST00000415828 KLKP1Q107X0 134 aa2.03□□□□□ -2.08
CSTF1-202ENST00000415828 A0A1B0GU33 70 aa2.02□□□□□ -2.09
CSTF1-202ENST00000415828 C20orf197Q8N268 126 aa2.02□□□□□ -2.09
CSTF1-202ENST00000415828 SERP2Q8N6R1 65 aa2.02□□□□□ -2.09
CSTF1-202ENST00000415828 TP53AIP1Q9HCN2 124 aa2.01□□□□□ -2.09
CSTF1-202ENST00000415828 COX7CP15954 63 aa2□□□□□ -2.09
CSTF1-202ENST00000415828 C7orf65Q6ZTY9 151 aa2□□□□□ -2.09
CSTF1-202ENST00000415828 CYP4F30PQ9H0H9 118 aa2□□□□□ -2.09
CSTF1-202ENST00000415828 KRTAP12-3P60328 96 aa1.99□□□□□ -2.09
CSTF1-202ENST00000415828 SMIM20Q8N5G0 67 aa1.99□□□□□ -2.09
CSTF1-202ENST00000415828 LOC101927531A0A1B0GV80 90 aa1.98□□□□□ -2.09
CSTF1-202ENST00000415828 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
CSTF1-202ENST00000415828 H3BPC8 53 aa1.95□□□□□ -2.1
CSTF1-202ENST00000415828 H7BZZ5 65 aa1.95□□□□□ -2.1
CSTF1-202ENST00000415828 KRTAP20-2Q3LI61 65 aa1.95□□□□□ -2.1
CSTF1-202ENST00000415828 SPRR2GQ9BYE4 73 aa1.93□□□□□ -2.1
CSTF1-202ENST00000415828 H1FX-AS1Q4G0G2 97 aa1.92□□□□□ -2.1
CSTF1-202ENST00000415828 S4R3F8 94 aa1.92□□□□□ -2.1
CSTF1-202ENST00000415828 KRTAP12-4P60329 112 aa1.91□□□□□ -2.1
CSTF1-202ENST00000415828 MT1XP80297 61 aa1.91□□□□□ -2.1
CSTF1-202ENST00000415828 LCA10Q71F78 164 aa1.91□□□□□ -2.1
CSTF1-202ENST00000415828 DMAC1Q96GE9 116 aa1.91□□□□□ -2.1
CSTF1-202ENST00000415828 COA5Q86WW8 74 aa1.9□□□□□ -2.11
CSTF1-202ENST00000415828 CHKB-CPT1BH3BT56 60 aa1.89□□□□□ -2.11
CSTF1-202ENST00000415828 NDUFC1O43677 76 aa1.89□□□□□ -2.11
CSTF1-202ENST00000415828 SYNE1Q8NF91 8797 aaKnown RBP1.89□□□□□ -2.11
CSTF1-202ENST00000415828 ACYP2P14621 99 aa1.88□□□□□ -2.11
CSTF1-202ENST00000415828 TMEM258P61165 79 aa1.88□□□□□ -2.11
CSTF1-202ENST00000415828 A8MUN3 132 aa1.86□□□□□ -2.11
CSTF1-202ENST00000415828 CSAG1Q6PB30 78 aa1.85□□□□□ -2.11
CSTF1-202ENST00000415828 ATP5EP56381 51 aaPredicted RBP1.84□□□□□ -2.11
CSTF1-202ENST00000415828 SERP1Q9Y6X1 66 aa1.84□□□□□ -2.11
CSTF1-202ENST00000415828 KRTAP19-3Q7Z4W3 81 aa1.82□□□□□ -2.12
CSTF1-202ENST00000415828 SPTSSBQ8NFR3 76 aa1.8□□□□□ -2.12
CSTF1-202ENST00000415828 PRR15LQ9BU68 103 aa1.8□□□□□ -2.12
CSTF1-202ENST00000415828 PRO2289Q9P1D8 64 aa1.79□□□□□ -2.12
CSTF1-202ENST00000415828 A0A1B0GU69 56 aa1.78□□□□□ -2.12
CSTF1-202ENST00000415828 KRTAP13-4Q3LI77 160 aa1.78□□□□□ -2.12
CSTF1-202ENST00000415828 LINC01554Q52M75 96 aa1.78□□□□□ -2.12
CSTF1-202ENST00000415828 SPATA8Q6RVD6 105 aa1.78□□□□□ -2.12
CSTF1-202ENST00000415828 A0A0D9SG42 100 aa1.77□□□□□ -2.13
CSTF1-202ENST00000415828 M0QZ58 72 aa1.77□□□□□ -2.13
CSTF1-202ENST00000415828 LINC01558Q9Y6Z2 57 aa1.77□□□□□ -2.13
CSTF1-202ENST00000415828 PMAIP1Q13794 54 aa1.76□□□□□ -2.13
CSTF1-202ENST00000415828 H0YAA0 97 aa1.75□□□□□ -2.13
CSTF1-202ENST00000415828 RPS28P62857 69 aaKnown RBP1.75□□□□□ -2.13
CSTF1-202ENST00000415828 Q1T7F1 81 aa1.74□□□□□ -2.13
CSTF1-202ENST00000415828 MT1EP04732 61 aa1.72□□□□□ -2.13
CSTF1-202ENST00000415828 KRTAP19-7Q3SYF9 63 aa1.72□□□□□ -2.13
CSTF1-202ENST00000415828 KTN1-AS1Q86SY8 53 aa1.72□□□□□ -2.13
CSTF1-202ENST00000415828 MIR22HGQ0VDD5 57 aa1.7□□□□□ -2.14
CSTF1-202ENST00000415828 MT1MQ8N339 61 aa1.69□□□□□ -2.14
CSTF1-202ENST00000415828 CRIPTQ9P021 101 aa1.69□□□□□ -2.14
CSTF1-202ENST00000415828 UQCR11O14957 56 aa1.68□□□□□ -2.14
CSTF1-202ENST00000415828 KRTAP12-1P59990 96 aa1.68□□□□□ -2.14
CSTF1-202ENST00000415828 MT1GP13640 62 aa1.67□□□□□ -2.14
CSTF1-202ENST00000415828 PLAC4Q8WY50 150 aa1.66□□□□□ -2.14
CSTF1-202ENST00000415828 BRK1Q8WUW1 75 aa1.65□□□□□ -2.15
CSTF1-202ENST00000415828 CDC42SE1Q9NRR8 79 aa1.63□□□□□ -2.15
CSTF1-202ENST00000415828 C10orf95Q9H7T3 257 aa1.61□□□□□ -2.15
CSTF1-202ENST00000415828 ROMO1P60602 79 aa1.55□□□□□ -2.16
CSTF1-202ENST00000415828 MT1LQ93083 61 aa1.53□□□□□ -2.16
CSTF1-202ENST00000415828 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
CSTF1-202ENST00000415828 TNP1P09430 55 aa1.52□□□□□ -2.17
CSTF1-202ENST00000415828 KRTAP19-5Q3LI72 72 aa1.49□□□□□ -2.17
CSTF1-202ENST00000415828 KRTAP6-2Q3LI66 62 aa1.42□□□□□ -2.18
CSTF1-202ENST00000415828 KRTAP6-1Q3LI64 71 aa1.36□□□□□ -2.19
CSTF1-202ENST00000415828 MT1AP04731 61 aa1.25□□□□□ -2.21
CSTF1-202ENST00000415828 INE1O15225 51 aa1.23□□□□□ -2.21
CSTF1-202ENST00000415828 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
CSTF1-202ENST00000415828 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
CSTF1-202ENST00000415828 PRM1P04553 51 aa0.84□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 880.4 ms