RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 VCANP13611 3396 aa0.81□□□□□ -2.28
HMGB1P13-201ENST00000406019 KRTAP6-2Q3LI66 62 aa0.81□□□□□ -2.28
HMGB1P13-201ENST00000406019 AHNAK2Q8IVF2 5795 aa0.81□□□□□ -2.28
HMGB1P13-201ENST00000406019 MAST4O15021 2626 aa0.8□□□□□ -2.28
HMGB1P13-201ENST00000406019 BRCA2P51587 3418 aa0.79□□□□□ -2.28
HMGB1P13-201ENST00000406019 RPS29P62273 56 aaKnown RBP0.79□□□□□ -2.28
HMGB1P13-201ENST00000406019 Q9Y3F1 56 aa0.79□□□□□ -2.28
HMGB1P13-201ENST00000406019 CEP295Q9C0D2 2601 aa0.79□□□□□ -2.28
HMGB1P13-201ENST00000406019 PCNTO95613 3336 aa0.78□□□□□ -2.28
HMGB1P13-201ENST00000406019 CENPEQ02224 2701 aa0.78□□□□□ -2.28
HMGB1P13-201ENST00000406019 LRP1BQ9NZR2 4599 aa0.78□□□□□ -2.28
HMGB1P13-201ENST00000406019 WDFY3Q8IZQ1 3526 aa0.78□□□□□ -2.28
HMGB1P13-201ENST00000406019 HERC1Q15751 4861 aa0.78□□□□□ -2.29
HMGB1P13-201ENST00000406019 SPRR2DP22532 72 aa0.76□□□□□ -2.29
HMGB1P13-201ENST00000406019 KRTAP21-1Q3LI58 79 aa0.76□□□□□ -2.29
HMGB1P13-201ENST00000406019 IGSF10Q6WRI0 2623 aa0.76□□□□□ -2.29
HMGB1P13-201ENST00000406019 SPTAN1Q13813 2472 aaKnown RBP0.75□□□□□ -2.29
HMGB1P13-201ENST00000406019 EYSQ5T1H1 3165 aa0.75□□□□□ -2.29
HMGB1P13-201ENST00000406019 MT1AP04731 61 aa0.75□□□□□ -2.29
HMGB1P13-201ENST00000406019 AHNAKQ09666 5890 aaKnown RBP0.75□□□□□ -2.29
HMGB1P13-201ENST00000406019 STARD9Q9P2P6 4700 aa0.75□□□□□ -2.29
HMGB1P13-201ENST00000406019 MUC2Q02817 5179 aa0.74□□□□□ -2.29
HMGB1P13-201ENST00000406019 TLN1Q9Y490 2541 aaKnown RBP0.73□□□□□ -2.29
HMGB1P13-201ENST00000406019 MUC5BQ9HC84 5762 aaPredicted RBP0.73□□□□□ -2.29
HMGB1P13-201ENST00000406019 LRP2P98164 4655 aa0.73□□□□□ -2.29
HMGB1P13-201ENST00000406019 KIAA1109Q2LD37 5005 aa0.72□□□□□ -2.29
HMGB1P13-201ENST00000406019 DNAH14Q0VDD8 3507 aa0.72□□□□□ -2.29
HMGB1P13-201ENST00000406019 SPRR2BP35325 72 aa0.71□□□□□ -2.3
HMGB1P13-201ENST00000406019 MACF1Q9UPN3 7388 aaKnown RBP0.69□□□□□ -2.3
HMGB1P13-201ENST00000406019 SPRR2FQ96RM1 72 aa0.68□□□□□ -2.3
HMGB1P13-201ENST00000406019 CDH23Q9H251 3354 aa0.68□□□□□ -2.3
HMGB1P13-201ENST00000406019 SPRR2AP35326 72 aa0.67□□□□□ -2.3
HMGB1P13-201ENST00000406019 SYNE2Q8WXH0 6885 aaKnown RBP0.66□□□□□ -2.3
HMGB1P13-201ENST00000406019 NEBP20929 6669 aa0.64□□□□□ -2.31
HMGB1P13-201ENST00000406019 MDN1Q9NU22 5596 aa0.64□□□□□ -2.31
HMGB1P13-201ENST00000406019 SPRR2EP22531 72 aa0.63□□□□□ -2.31
HMGB1P13-201ENST00000406019 FSIP2Q5CZC0 6907 aa0.62□□□□□ -2.31
HMGB1P13-201ENST00000406019 HMCN2Q8NDA2 5059 aa0.62□□□□□ -2.31
HMGB1P13-201ENST00000406019 KMT2CQ8NEZ4 4911 aaKnown RBP0.61□□□□□ -2.31
HMGB1P13-201ENST00000406019 MYO9AB2RTY4 2548 aa0.6□□□□□ -2.31
HMGB1P13-201ENST00000406019 DSTQ03001 7570 aaKnown RBP0.6□□□□□ -2.31
HMGB1P13-201ENST00000406019 RYR1P21817 5038 aa0.59□□□□□ -2.31
HMGB1P13-201ENST00000406019 KMT2DO14686 5537 aa0.59□□□□□ -2.32
HMGB1P13-201ENST00000406019 MUC5ACP98088 5654 aa0.58□□□□□ -2.32
HMGB1P13-201ENST00000406019 USH2AO75445 5202 aa0.58□□□□□ -2.32
HMGB1P13-201ENST00000406019 EPPK1P58107 5090 aaKnown RBP0.58□□□□□ -2.32
HMGB1P13-201ENST00000406019 MT1EP04732 61 aa0.57□□□□□ -2.32
HMGB1P13-201ENST00000406019 DNHD1Q96M86 4753 aa0.57□□□□□ -2.32
HMGB1P13-201ENST00000406019 HYDINQ4G0P3 5121 aa0.56□□□□□ -2.32
HMGB1P13-201ENST00000406019 SSPOA2VEC9 5147 aa0.56□□□□□ -2.32
HMGB1P13-201ENST00000406019 RYR2Q92736 4967 aa0.56□□□□□ -2.32
HMGB1P13-201ENST00000406019 MT1XP80297 61 aa0.55□□□□□ -2.32
HMGB1P13-201ENST00000406019 SPRR2GQ9BYE4 73 aa0.55□□□□□ -2.32
HMGB1P13-201ENST00000406019 ABCA13Q86UQ4 5058 aa0.55□□□□□ -2.32
HMGB1P13-201ENST00000406019 MT1LQ93083 61 aa0.54□□□□□ -2.32
HMGB1P13-201ENST00000406019 RNF213Q63HN8 5207 aa0.54□□□□□ -2.32
HMGB1P13-201ENST00000406019 FAT4Q6V0I7 4981 aa0.54□□□□□ -2.32
HMGB1P13-201ENST00000406019 HERC2O95714 4834 aa0.53□□□□□ -2.32
HMGB1P13-201ENST00000406019 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
HMGB1P13-201ENST00000406019 RYR3Q15413 4870 aa0.52□□□□□ -2.33
HMGB1P13-201ENST00000406019 BIRC6Q9NR09 4857 aa0.52□□□□□ -2.33
HMGB1P13-201ENST00000406019 MT1HP80294 61 aa0.49□□□□□ -2.33
HMGB1P13-201ENST00000406019 MT1GP13640 62 aa0.48□□□□□ -2.33
HMGB1P13-201ENST00000406019 KRTAP19-7Q3SYF9 63 aa0.48□□□□□ -2.33
HMGB1P13-201ENST00000406019 KRTAP19-2Q3LHN2 52 aa0.45□□□□□ -2.34
HMGB1P13-201ENST00000406019 KRTAP19-8Q3LI54 63 aa0.45□□□□□ -2.34
HMGB1P13-201ENST00000406019 KRTAP6-1Q3LI64 71 aa0.43□□□□□ -2.34
HMGB1P13-201ENST00000406019 MT1BP07438 61 aa0.41□□□□□ -2.34
HMGB1P13-201ENST00000406019 KRTAP20-1Q3LI63 56 aa0.4□□□□□ -2.35
HMGB1P13-201ENST00000406019 MUC12Q9UKN1 5478 aa0.38□□□□□ -2.35
HMGB1P13-201ENST00000406019 MT1MQ8N339 61 aa0.35□□□□□ -2.35
HMGB1P13-201ENST00000406019 MT2AP02795 61 aa0.31□□□□□ -2.36
HMGB1P13-201ENST00000406019 MT1FP04733 61 aa0.27□□□□□ -2.37
HMGB1P13-201ENST00000406019 MT1HL1P0DM35 61 aa0.16□□□□□ -2.38
HMGB1P13-201ENST00000406019 KRTAP20-2Q3LI61 65 aa0.09□□□□□ -2.4
HMGB1P13-201ENST00000406019 KRTAP19-6Q3LI70 58 aa0.06□□□□□ -2.4
HMGB1P13-201ENST00000406019 MT4P47944 62 aa0.05□□□□□ -2.4
Retrieved 77 of 20,778 RNA–protein pairs in 8.8 ms