RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 ABCC3O15438 1527 aa-1.6□□□□□ -2.67
TRAJ28-201ENST00000390509 TRPM2O94759 1503 aa-1.6□□□□□ -2.67
TRAJ28-201ENST00000390509 LINC01549A6NIU2 74 aa-1.6□□□□□ -2.67
TRAJ28-201ENST00000390509 LINC00587B1AMM8 73 aa-1.6□□□□□ -2.67
TRAJ28-201ENST00000390509 NDUFA1O15239 70 aa-1.6□□□□□ -2.67
TRAJ28-201ENST00000390509 NALCNQ8IZF0 1738 aa-1.6□□□□□ -2.67
TRAJ28-201ENST00000390509 AGLP35573 1532 aa-1.61□□□□□ -2.67
TRAJ28-201ENST00000390509 PLNP26678 52 aa-1.61□□□□□ -2.67
TRAJ28-201ENST00000390509 Q9H521 79 aa-1.61□□□□□ -2.67
TRAJ28-201ENST00000390509 GNG13Q9P2W3 67 aa-1.61□□□□□ -2.67
TRAJ28-201ENST00000390509 ADIRFQ15847 76 aa-1.62□□□□□ -2.67
TRAJ28-201ENST00000390509 ABCC1P33527 1531 aa-1.62□□□□□ -2.67
TRAJ28-201ENST00000390509 PRXQ9BXM0 1461 aa-1.63□□□□□ -2.67
TRAJ28-201ENST00000390509 UGGT1Q9NYU2 1555 aa-1.63□□□□□ -2.67
TRAJ28-201ENST00000390509 H3BUX3 64 aa-1.63□□□□□ -2.67
TRAJ28-201ENST00000390509 C18orf32Q8TCD1 76 aa-1.63□□□□□ -2.67
TRAJ28-201ENST00000390509 HILPDAQ9Y5L2 63 aa-1.63□□□□□ -2.67
TRAJ28-201ENST00000390509 DCAF1Q9Y4B6 1507 aa-1.63□□□□□ -2.67
TRAJ28-201ENST00000390509 LOC105371267A0A1B0GV96 52 aa-1.64□□□□□ -2.67
TRAJ28-201ENST00000390509 ATP6V1G2-DDX39BF2Z307 99 aa-1.64□□□□□ -2.67
TRAJ28-201ENST00000390509 M0R143 59 aa-1.64□□□□□ -2.67
TRAJ28-201ENST00000390509 DDX60Q8IY21 1712 aaKnown RBP-1.64□□□□□ -2.67
TRAJ28-201ENST00000390509 APELAP0DMC3 54 aa-1.65□□□□□ -2.67
TRAJ28-201ENST00000390509 CNTLNQ9NXG0 1405 aa-1.66□□□□□ -2.67
TRAJ28-201ENST00000390509 ABCA8O94911 1581 aa-1.66□□□□□ -2.68
TRAJ28-201ENST00000390509 CFAP74Q9C0B2 1584 aa-1.66□□□□□ -2.68
TRAJ28-201ENST00000390509 A0A087WWC5 75 aa-1.66□□□□□ -2.68
TRAJ28-201ENST00000390509 PKIAP61925 76 aa-1.66□□□□□ -2.68
TRAJ28-201ENST00000390509 EFCAB10A6NFE3 127 aa-1.67□□□□□ -2.68
TRAJ28-201ENST00000390509 C14orf144Q96I85 54 aa-1.67□□□□□ -2.68
TRAJ28-201ENST00000390509 S100A13Q99584 98 aa-1.67□□□□□ -2.68
TRAJ28-201ENST00000390509 ADCY10Q96PN6 1610 aa-1.67□□□□□ -2.68
TRAJ28-201ENST00000390509 ABCA6Q8N139 1617 aa-1.68□□□□□ -2.68
TRAJ28-201ENST00000390509 V9GYS6 101 aa-1.68□□□□□ -2.68
TRAJ28-201ENST00000390509 TOP2AP11388 1531 aaKnown RBP-1.69□□□□□ -2.68
TRAJ28-201ENST00000390509 A0A096LPF7 62 aa-1.69□□□□□ -2.68
TRAJ28-201ENST00000390509 DUOX1Q9NRD9 1551 aa-1.69□□□□□ -2.68
TRAJ28-201ENST00000390509 CLTCL1P53675 1640 aa-1.69□□□□□ -2.68
TRAJ28-201ENST00000390509 CPS1P31327 1500 aa-1.7□□□□□ -2.68
TRAJ28-201ENST00000390509 HTN3P15516 51 aa-1.7□□□□□ -2.68
TRAJ28-201ENST00000390509 RPL39P62891 51 aaKnown RBP-1.72□□□□□ -2.68
TRAJ28-201ENST00000390509 ABCA5Q8WWZ7 1642 aa-1.73□□□□□ -2.69
TRAJ28-201ENST00000390509 CCDC18Q5T9S5 1454 aa-1.74□□□□□ -2.69
TRAJ28-201ENST00000390509 ATP7AQ04656 1500 aa-1.75□□□□□ -2.69
TRAJ28-201ENST00000390509 UGGT2Q9NYU1 1516 aa-1.75□□□□□ -2.69
TRAJ28-201ENST00000390509 SAMD9LQ8IVG5 1584 aa-1.75□□□□□ -2.69
TRAJ28-201ENST00000390509 RPL39LQ96EH5 51 aaKnown RBP-1.75□□□□□ -2.69
TRAJ28-201ENST00000390509 SMCO4Q9NRQ5 59 aa-1.75□□□□□ -2.69
TRAJ28-201ENST00000390509 ABCA9Q8IUA7 1624 aa-1.76□□□□□ -2.69
TRAJ28-201ENST00000390509 H3BSH0 61 aa-1.77□□□□□ -2.69
TRAJ28-201ENST00000390509 ERICH3Q5RHP9 1530 aa-1.77□□□□□ -2.69
TRAJ28-201ENST00000390509 CMC2Q9NRP2 79 aa-1.78□□□□□ -2.69
TRAJ28-201ENST00000390509 PRCDQ00LT1 54 aa-1.79□□□□□ -2.7
TRAJ28-201ENST00000390509 Q9Y3F1 56 aa-1.79□□□□□ -2.7
TRAJ28-201ENST00000390509 IQGAP1P46940 1657 aa-1.8□□□□□ -2.7
TRAJ28-201ENST00000390509 IQGAP3Q86VI3 1631 aa-1.8□□□□□ -2.7
TRAJ28-201ENST00000390509 K7EIM0 57 aa-1.8□□□□□ -2.7
TRAJ28-201ENST00000390509 ABCA10Q8WWZ4 1543 aa-1.81□□□□□ -2.7
TRAJ28-201ENST00000390509 TMEM167AQ8TBQ9 72 aa-1.81□□□□□ -2.7
TRAJ28-201ENST00000390509 FANCD2Q9BXW9 1451 aa-1.82□□□□□ -2.7
TRAJ28-201ENST00000390509 ABCC8Q09428 1581 aa-1.84□□□□□ -2.7
TRAJ28-201ENST00000390509 SMIM5Q71RC9 77 aa-1.84□□□□□ -2.7
TRAJ28-201ENST00000390509 ARHGAP5-AS1Q96IT6 56 aa-1.85□□□□□ -2.71
TRAJ28-201ENST00000390509 COX14Q96I36 57 aa-1.86□□□□□ -2.71
TRAJ28-201ENST00000390509 MROH2BQ7Z745 1585 aa-1.86□□□□□ -2.71
TRAJ28-201ENST00000390509 SNRPGP15A8MWD9 76 aa-1.88□□□□□ -2.71
TRAJ28-201ENST00000390509 EFCAB5A4FU69 1503 aa-1.88□□□□□ -2.71
TRAJ28-201ENST00000390509 GNG2P59768 71 aa-1.92□□□□□ -2.72
TRAJ28-201ENST00000390509 DEFB108BQ8NET1 73 aa-1.96□□□□□ -2.72
TRAJ28-201ENST00000390509 STATHP02808 62 aa-1.99□□□□□ -2.73
TRAJ28-201ENST00000390509 SNRPGP62308 76 aaKnown RBP-1.99□□□□□ -2.73
TRAJ28-201ENST00000390509 RPL39P5Q59GN2 51 aa-1.99□□□□□ -2.73
TRAJ28-201ENST00000390509 IQGAP2Q13576 1575 aa-1.99□□□□□ -2.73
TRAJ28-201ENST00000390509 DEFB108AA8MXU0 73 aa-2□□□□□ -2.73
TRAJ28-201ENST00000390509 SMIM31A0A1B0GVY4 71 aa-2.08□□□□□ -2.74
TRAJ28-201ENST00000390509 TOMM5Q8N4H5 51 aa-2.08□□□□□ -2.74
TRAJ28-201ENST00000390509 GCC2Q8IWJ2 1684 aa-2.14□□□□□ -2.75
Retrieved 77 of 20,778 RNA–protein pairs in 8.4 ms