RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 POTEDQ86YR6 584 aa1.65□□□□□ -2.15
TRAJ28-201ENST00000390509 AEBP2Q6ZN18 517 aaPredicted RBP1.44□□□□□ -2.18
TRAJ28-201ENST00000390509 CHIC1Q5VXU3 224 aa1.4□□□□□ -2.19
TRAJ28-201ENST00000390509 SENP3Q9H4L4 574 aaPredicted RBP1.33□□□□□ -2.2
TRAJ28-201ENST00000390509 MSH5O43196 834 aa1.29□□□□□ -2.2
TRAJ28-201ENST00000390509 CACNB1Q02641 598 aaPredicted RBP1.25□□□□□ -2.21
TRAJ28-201ENST00000390509 POTEHQ6S545 545 aa1.25□□□□□ -2.21
TRAJ28-201ENST00000390509 FOXD1Q16676 465 aa1.23□□□□□ -2.21
TRAJ28-201ENST00000390509 PHF23Q9BUL5 403 aaPredicted RBP1.23□□□□□ -2.21
TRAJ28-201ENST00000390509 PLSCR2Q9NRY7 297 aa1.14□□□□□ -2.23
TRAJ28-201ENST00000390509 PIAS4Q8N2W9 510 aaPredicted RBP1.11□□□□□ -2.23
TRAJ28-201ENST00000390509 SP7Q8TDD2 431 aaPredicted RBP1.06□□□□□ -2.24
TRAJ28-201ENST00000390509 RNF39Q9H2S5 420 aa1.06□□□□□ -2.24
TRAJ28-201ENST00000390509 C1QBPQ07021 282 aaKnown RBP1.04□□□□□ -2.24
TRAJ28-201ENST00000390509 DMRT2Q9Y5R5 561 aa1□□□□□ -2.25
TRAJ28-201ENST00000390509 DCAF8L1A6NGE4 600 aa0.98□□□□□ -2.25
TRAJ28-201ENST00000390509 LHX8Q68G74 356 aa0.98□□□□□ -2.25
TRAJ28-201ENST00000390509 PCDH10Q9P2E7 1040 aa0.97□□□□□ -2.25
TRAJ28-201ENST00000390509 CHRDL2Q6WN34 429 aa0.96□□□□□ -2.26
TRAJ28-201ENST00000390509 POTEMA6NI47 508 aa0.94□□□□□ -2.26
TRAJ28-201ENST00000390509 HAX1O00165 279 aa0.93□□□□□ -2.26
TRAJ28-201ENST00000390509 ADRA2BP18089 450 aa0.93□□□□□ -2.26
TRAJ28-201ENST00000390509 POTEGQ6S5H5 508 aa0.93□□□□□ -2.26
TRAJ28-201ENST00000390509 PPP6R1Q9UPN7 881 aa0.93□□□□□ -2.26
TRAJ28-201ENST00000390509 MAPK8IP2Q13387 824 aaPredicted RBP0.91□□□□□ -2.26
TRAJ28-201ENST00000390509 SCAF1Q9H7N4 1312 aaKnown RBP0.9□□□□□ -2.26
TRAJ28-201ENST00000390509 RBM42Q9BTD8 480 aaKnown RBP0.9□□□□□ -2.27
TRAJ28-201ENST00000390509 DNAJC5BQ9UF47 199 aa0.9□□□□□ -2.27
TRAJ28-201ENST00000390509 DSG3P32926 999 aa0.89□□□□□ -2.27
TRAJ28-201ENST00000390509 PIP4P2Q8N4L2 257 aa0.87□□□□□ -2.27
TRAJ28-201ENST00000390509 CAPN15O75808 1086 aa0.86□□□□□ -2.27
TRAJ28-201ENST00000390509 HOXD11P31277 338 aaPredicted RBP0.86□□□□□ -2.27
TRAJ28-201ENST00000390509 EVX2Q03828 476 aa0.85□□□□□ -2.27
TRAJ28-201ENST00000390509 GABBR2O75899 941 aa0.84□□□□□ -2.27
TRAJ28-201ENST00000390509 MMRN1Q13201 1228 aa0.84□□□□□ -2.27
TRAJ28-201ENST00000390509 CDAN1Q8IWY9 1227 aa0.84□□□□□ -2.27
TRAJ28-201ENST00000390509 OTUD5Q96G74 571 aa0.84□□□□□ -2.27
TRAJ28-201ENST00000390509 PLPPR3Q6T4P5 718 aa0.83□□□□□ -2.28
TRAJ28-201ENST00000390509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP0.83□□□□□ -2.28
TRAJ28-201ENST00000390509 FXR2P51116 673 aaKnown RBP eCLIP0.82□□□□□ -2.28
TRAJ28-201ENST00000390509 SPINK5Q9NQ38 1064 aaPredicted RBP0.82□□□□□ -2.28
TRAJ28-201ENST00000390509 C19orf67A6NJJ6 358 aa0.81□□□□□ -2.28
TRAJ28-201ENST00000390509 POTEIP0CG38 1075 aa0.81□□□□□ -2.28
TRAJ28-201ENST00000390509 LCE2DQ5TA82 110 aaPredicted RBP0.81□□□□□ -2.28
TRAJ28-201ENST00000390509 SPNS2Q8IVW8 549 aa0.81□□□□□ -2.28
TRAJ28-201ENST00000390509 AKT1S1Q96B36 256 aa0.81□□□□□ -2.28
TRAJ28-201ENST00000390509 ABCB7O75027 752 aa0.8□□□□□ -2.28
TRAJ28-201ENST00000390509 FAM163AQ96GL9 167 aaPredicted RBP0.8□□□□□ -2.28
TRAJ28-201ENST00000390509 PITPNM1O00562 1244 aa0.79□□□□□ -2.28
TRAJ28-201ENST00000390509 CLCN6P51797 869 aa0.79□□□□□ -2.28
TRAJ28-201ENST00000390509 APLP2Q06481 763 aa0.79□□□□□ -2.28
TRAJ28-201ENST00000390509 MAMSTRQ6ZN01 415 aa0.79□□□□□ -2.28
TRAJ28-201ENST00000390509 REM2Q8IYK8 340 aaPredicted RBP0.79□□□□□ -2.28
TRAJ28-201ENST00000390509 DCBLD2Q96PD2 775 aa0.79□□□□□ -2.28
TRAJ28-201ENST00000390509 RNF216Q9NWF9 866 aaPredicted RBP0.79□□□□□ -2.28
TRAJ28-201ENST00000390509 ZNF219Q9P2Y4 722 aaPredicted RBP0.79□□□□□ -2.28
TRAJ28-201ENST00000390509 LOC100996750A0A140TA64 210 aa0.78□□□□□ -2.28
TRAJ28-201ENST00000390509 KRTAP4-6Q9BYQ5 205 aa0.78□□□□□ -2.28
TRAJ28-201ENST00000390509 POTEB2H3BUK9 544 aa0.77□□□□□ -2.29
TRAJ28-201ENST00000390509 TRHP20396 242 aaPredicted RBP0.77□□□□□ -2.29
TRAJ28-201ENST00000390509 SCUBE2Q9NQ36 999 aa0.77□□□□□ -2.29
TRAJ28-201ENST00000390509 PRKAR2AP13861 404 aaKnown RBP0.76□□□□□ -2.29
TRAJ28-201ENST00000390509 U3KPZ7 1027 aaPredicted RBP0.76□□□□□ -2.29
TRAJ28-201ENST00000390509 CD44P16070 742 aaKnown RBP0.74□□□□□ -2.29
TRAJ28-201ENST00000390509 CNKSR2Q8WXI2 1034 aa0.74□□□□□ -2.29
TRAJ28-201ENST00000390509 RNF166Q96A37 237 aaPredicted RBP0.73□□□□□ -2.29
TRAJ28-201ENST00000390509 TMEM121BQ9BXQ6 578 aaPredicted RBP0.73□□□□□ -2.29
TRAJ28-201ENST00000390509 METRNQ9UJH8 293 aa0.73□□□□□ -2.29
TRAJ28-201ENST00000390509 ST18O60284 1047 aa0.72□□□□□ -2.29
TRAJ28-201ENST00000390509 POTEJP0CG39 1038 aa0.72□□□□□ -2.29
TRAJ28-201ENST00000390509 C7P10643 843 aa0.72□□□□□ -2.29
TRAJ28-201ENST00000390509 ZNF579Q8NAF0 562 aaKnown RBP0.72□□□□□ -2.29
TRAJ28-201ENST00000390509 SLC39A7Q92504 469 aa0.72□□□□□ -2.29
TRAJ28-201ENST00000390509 IRX2Q9BZI1 471 aaPredicted RBP0.72□□□□□ -2.29
TRAJ28-201ENST00000390509 ZBTB12Q9Y330 459 aaPredicted RBP0.72□□□□□ -2.29
TRAJ28-201ENST00000390509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP0.7□□□□□ -2.3
TRAJ28-201ENST00000390509 HNRNPUL2Q1KMD3 747 aaKnown RBP0.7□□□□□ -2.3
TRAJ28-201ENST00000390509 SPDYE1Q8NFV5 336 aaPredicted RBP0.7□□□□□ -2.3
TRAJ28-201ENST00000390509 KRTAP3-3Q9BYR6 98 aa0.7□□□□□ -2.3
TRAJ28-201ENST00000390509 KRTAP3-2Q9BYR7 98 aa0.7□□□□□ -2.3
TRAJ28-201ENST00000390509 GALR2O43603 387 aaPredicted RBP0.69□□□□□ -2.3
TRAJ28-201ENST00000390509 RGS20O76081 388 aa0.69□□□□□ -2.3
TRAJ28-201ENST00000390509 PTGER2P43116 358 aa0.69□□□□□ -2.3
TRAJ28-201ENST00000390509 OSCARQ8IYS5 282 aa0.69□□□□□ -2.3
TRAJ28-201ENST00000390509 PELP1Q8IZL8 1130 aaKnown RBP0.69□□□□□ -2.3
TRAJ28-201ENST00000390509 MARVELD3Q96A59 401 aa0.69□□□□□ -2.3
TRAJ28-201ENST00000390509 PLA2G2EQ9NZK7 142 aa0.69□□□□□ -2.3
TRAJ28-201ENST00000390509 MYT1LQ9UL68 1186 aa0.69□□□□□ -2.3
TRAJ28-201ENST00000390509 SNPHO15079 494 aa0.68□□□□□ -2.3
TRAJ28-201ENST00000390509 EMP3P54852 163 aa0.68□□□□□ -2.3
TRAJ28-201ENST00000390509 POLA2Q14181 598 aa0.68□□□□□ -2.3
TRAJ28-201ENST00000390509 ASTLQ6HA08 431 aaPredicted RBP0.68□□□□□ -2.3
TRAJ28-201ENST00000390509 CHADLQ6NUI6 762 aa0.68□□□□□ -2.3
TRAJ28-201ENST00000390509 SAMD1Q6SPF0 538 aaPredicted RBP0.68□□□□□ -2.3
TRAJ28-201ENST00000390509 CLEC11AQ9Y240 323 aa0.68□□□□□ -2.3
TRAJ28-201ENST00000390509 SUZ12Q15022 739 aaKnown RBP0.67□□□□□ -2.3
TRAJ28-201ENST00000390509 PPP4R3CPQ6ZMV5 832 aa0.67□□□□□ -2.3
TRAJ28-201ENST00000390509 Q6ZNB5 142 aa0.67□□□□□ -2.3
TRAJ28-201ENST00000390509 KRTAP1-3Q8IUG1 177 aa0.67□□□□□ -2.3
TRAJ28-201ENST00000390509 SLAIN1Q8ND83 568 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms