RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 MT1EP04732 61 aa4.59□□□□□ -1.67
HDAC8-204ENST00000373560 AHNAKQ09666 5890 aaKnown RBP4.58□□□□□ -1.68
HDAC8-204ENST00000373560 CHKB-CPT1BH3BT56 60 aa4.57□□□□□ -1.68
HDAC8-204ENST00000373560 SPTSSBQ8NFR3 76 aa4.57□□□□□ -1.68
HDAC8-204ENST00000373560 KRTAP9-6A8MVA2 160 aa4.56□□□□□ -1.68
HDAC8-204ENST00000373560 SERP1Q9Y6X1 66 aa4.55□□□□□ -1.68
HDAC8-204ENST00000373560 COA5Q86WW8 74 aa4.54□□□□□ -1.68
HDAC8-204ENST00000373560 H0YAA0 97 aa4.53□□□□□ -1.68
HDAC8-204ENST00000373560 RPS28P62857 69 aaKnown RBP4.53□□□□□ -1.68
HDAC8-204ENST00000373560 ADM2Q7Z4H4 148 aa4.52□□□□□ -1.69
HDAC8-204ENST00000373560 MUC5ACP98088 5654 aa4.52□□□□□ -1.69
HDAC8-204ENST00000373560 KRTAP20-2Q3LI61 65 aa4.48□□□□□ -1.69
HDAC8-204ENST00000373560 KRTAP4-3Q9BYR4 195 aa4.47□□□□□ -1.69
HDAC8-204ENST00000373560 SMIM26A0A096LP01 95 aa4.44□□□□□ -1.7
HDAC8-204ENST00000373560 V9GYY9 64 aa4.44□□□□□ -1.7
HDAC8-204ENST00000373560 MT1MQ8N339 61 aa4.43□□□□□ -1.7
HDAC8-204ENST00000373560 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
HDAC8-204ENST00000373560 MT1GP13640 62 aa4.41□□□□□ -1.7
HDAC8-204ENST00000373560 SEC61GP60059 68 aa4.41□□□□□ -1.7
HDAC8-204ENST00000373560 R4GN34 69 aa4.4□□□□□ -1.71
HDAC8-204ENST00000373560 LINC01554Q52M75 96 aa4.39□□□□□ -1.71
HDAC8-204ENST00000373560 M0QZ58 72 aa4.38□□□□□ -1.71
HDAC8-204ENST00000373560 PRR15LQ9BU68 103 aa4.38□□□□□ -1.71
HDAC8-204ENST00000373560 P0C880 135 aa4.37□□□□□ -1.71
HDAC8-204ENST00000373560 Q1T7F1 81 aa4.36□□□□□ -1.71
HDAC8-204ENST00000373560 LINC01558Q9Y6Z2 57 aa4.36□□□□□ -1.71
HDAC8-204ENST00000373560 A0A1B0GU69 56 aa4.34□□□□□ -1.71
HDAC8-204ENST00000373560 PP632Q6XCG6 107 aa4.32□□□□□ -1.72
HDAC8-204ENST00000373560 KRTAP5-1Q6L8H4 278 aa4.3□□□□□ -1.72
HDAC8-204ENST00000373560 A8MU10 97 aa4.28□□□□□ -1.72
HDAC8-204ENST00000373560 KRTAP19-5Q3LI72 72 aa4.27□□□□□ -1.73
HDAC8-204ENST00000373560 LCE3EQ5T5B0 92 aa4.27□□□□□ -1.73
HDAC8-204ENST00000373560 KRTAP5-8O75690 187 aa4.25□□□□□ -1.73
HDAC8-204ENST00000373560 MT1LQ93083 61 aa4.25□□□□□ -1.73
HDAC8-204ENST00000373560 A0A1B0GU33 70 aa4.24□□□□□ -1.73
HDAC8-204ENST00000373560 PSPHP1O15172 72 aa4.22□□□□□ -1.73
HDAC8-204ENST00000373560 UQCR11O14957 56 aa4.21□□□□□ -1.74
HDAC8-204ENST00000373560 KRTAP5-5Q701N2 237 aaPredicted RBP4.16□□□□□ -1.74
HDAC8-204ENST00000373560 A6NED7 52 aa4.15□□□□□ -1.75
HDAC8-204ENST00000373560 SYNE1Q8NF91 8797 aaKnown RBP4.14□□□□□ -1.75
HDAC8-204ENST00000373560 MIR22HGQ0VDD5 57 aa4.13□□□□□ -1.75
HDAC8-204ENST00000373560 KRTAP12-4P60329 112 aa4.11□□□□□ -1.75
HDAC8-204ENST00000373560 KRTAP13-4Q3LI77 160 aa4.1□□□□□ -1.75
HDAC8-204ENST00000373560 SPATA8Q6RVD6 105 aa4.1□□□□□ -1.75
HDAC8-204ENST00000373560 KRTAP4-4Q9BYR3 166 aa4.08□□□□□ -1.76
HDAC8-204ENST00000373560 CDC42SE1Q9NRR8 79 aa4.07□□□□□ -1.76
HDAC8-204ENST00000373560 K7ERS5 55 aa4.06□□□□□ -1.76
HDAC8-204ENST00000373560 A0A0D9SG42 100 aa4.02□□□□□ -1.77
HDAC8-204ENST00000373560 BRK1Q8WUW1 75 aa4.01□□□□□ -1.77
HDAC8-204ENST00000373560 KRTAP5-2Q701N4 177 aa4□□□□□ -1.77
HDAC8-204ENST00000373560 CAMK2N1Q7Z7J9 78 aa3.98□□□□□ -1.77
HDAC8-204ENST00000373560 SPINT4Q6UDR6 99 aa3.97□□□□□ -1.77
HDAC8-204ENST00000373560 KRTAP12-1P59990 96 aa3.95□□□□□ -1.78
HDAC8-204ENST00000373560 OBSCNQ5VST9 7968 aa3.95□□□□□ -1.78
HDAC8-204ENST00000373560 LCE3AQ5TA76 89 aa3.94□□□□□ -1.78
HDAC8-204ENST00000373560 PRO0628Q9UI54 55 aa3.9□□□□□ -1.79
HDAC8-204ENST00000373560 C10orf95Q9H7T3 257 aa3.85□□□□□ -1.79
HDAC8-204ENST00000373560 PMAIP1Q13794 54 aa3.82□□□□□ -1.8
HDAC8-204ENST00000373560 ROMO1P60602 79 aa3.79□□□□□ -1.8
HDAC8-204ENST00000373560 TNP1P09430 55 aa3.74□□□□□ -1.81
HDAC8-204ENST00000373560 KRTAP25-1Q3LHN0 102 aa3.72□□□□□ -1.81
HDAC8-204ENST00000373560 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
HDAC8-204ENST00000373560 KRTAP6-2Q3LI66 62 aa3.64□□□□□ -1.83
HDAC8-204ENST00000373560 KTN1-AS1Q86SY8 53 aa3.63□□□□□ -1.83
HDAC8-204ENST00000373560 MT1AP04731 61 aa3.57□□□□□ -1.84
HDAC8-204ENST00000373560 KRTAP12-3P60328 96 aa3.55□□□□□ -1.84
HDAC8-204ENST00000373560 LCE3DQ9BYE3 92 aa3.5□□□□□ -1.85
HDAC8-204ENST00000373560 LCE1CQ5T751 118 aa3.36□□□□□ -1.87
HDAC8-204ENST00000373560 LCE1BQ5T7P3 118 aa3.36□□□□□ -1.87
HDAC8-204ENST00000373560 PHGR1C9JFL3 82 aa3.06□□□□□ -1.92
HDAC8-204ENST00000373560 LUZP6Q538Z0 58 aa3.03□□□□□ -1.92
HDAC8-204ENST00000373560 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
HDAC8-204ENST00000373560 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
HDAC8-204ENST00000373560 INE1O15225 51 aa2.39□□□□□ -2.03
HDAC8-204ENST00000373560 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
HDAC8-204ENST00000373560 PRM1P04553 51 aa1.93□□□□□ -2.1
HDAC8-204ENST00000373560 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 102.8 ms