RNA–Protein interactions for RNA: ENST00000359079.8

SGMS2-201, Transcript of sphingomyelin synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS2, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-201ENST00000359079 LRP1BQ9NZR2 4599 aa0.66□□□□□ -2.3
SGMS2-201ENST00000359079 EPPK1P58107 5090 aaKnown RBP0.65□□□□□ -2.3
SGMS2-201ENST00000359079 FAT4Q6V0I7 4981 aa0.65□□□□□ -2.31
SGMS2-201ENST00000359079 MGAM2Q2M2H8 2515 aa0.65□□□□□ -2.31
SGMS2-201ENST00000359079 HERC1Q15751 4861 aa0.64□□□□□ -2.31
SGMS2-201ENST00000359079 LINC01556Q5JQF7 62 aa0.64□□□□□ -2.31
SGMS2-201ENST00000359079 DOPEY1Q5JWR5 2465 aa0.63□□□□□ -2.31
SGMS2-201ENST00000359079 NBEAL1Q6ZS30 2694 aa0.63□□□□□ -2.31
SGMS2-201ENST00000359079 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
SGMS2-201ENST00000359079 SPRR2FQ96RM1 72 aa0.63□□□□□ -2.31
SGMS2-201ENST00000359079 DNAH5Q8TE73 4624 aa0.62□□□□□ -2.31
SGMS2-201ENST00000359079 ABCA13Q86UQ4 5058 aa0.62□□□□□ -2.31
SGMS2-201ENST00000359079 DYNC1H1Q14204 4646 aaKnown RBP0.62□□□□□ -2.31
SGMS2-201ENST00000359079 CFAP47Q6ZTR5 3102 aa0.61□□□□□ -2.31
SGMS2-201ENST00000359079 SPRR2EP22531 72 aa0.61□□□□□ -2.31
SGMS2-201ENST00000359079 SRCAPQ6ZRS2 3230 aa0.6□□□□□ -2.31
SGMS2-201ENST00000359079 SPEGQ15772 3267 aa0.6□□□□□ -2.31
SGMS2-201ENST00000359079 LOC400499M0QZD8 3231 aa0.6□□□□□ -2.31
SGMS2-201ENST00000359079 SPTAN1Q13813 2472 aaKnown RBP0.6□□□□□ -2.31
SGMS2-201ENST00000359079 MUC17Q685J3 4493 aa0.6□□□□□ -2.31
SGMS2-201ENST00000359079 USP34Q70CQ2 3546 aa0.6□□□□□ -2.31
SGMS2-201ENST00000359079 UTRNP46939 3433 aa0.59□□□□□ -2.31
SGMS2-201ENST00000359079 RYR3Q15413 4870 aa0.59□□□□□ -2.31
SGMS2-201ENST00000359079 RPS29P62273 56 aaKnown RBP0.59□□□□□ -2.31
SGMS2-201ENST00000359079 ASPMQ8IZT6 3477 aa0.59□□□□□ -2.31
SGMS2-201ENST00000359079 MYO15AQ9UKN7 3530 aa0.59□□□□□ -2.32
SGMS2-201ENST00000359079 RNF213Q63HN8 5207 aa0.58□□□□□ -2.32
SGMS2-201ENST00000359079 HMCN2Q8NDA2 5059 aa0.57□□□□□ -2.32
SGMS2-201ENST00000359079 LAMA2P24043 3122 aaKnown RBP0.57□□□□□ -2.32
SGMS2-201ENST00000359079 HYDINQ4G0P3 5121 aa0.57□□□□□ -2.32
SGMS2-201ENST00000359079 CEP295Q9C0D2 2601 aa0.56□□□□□ -2.32
SGMS2-201ENST00000359079 STAB2Q8WWQ8 2551 aa0.55□□□□□ -2.32
SGMS2-201ENST00000359079 UNC80Q8N2C7 3258 aa0.54□□□□□ -2.32
SGMS2-201ENST00000359079 Q9Y3F1 56 aa0.54□□□□□ -2.32
SGMS2-201ENST00000359079 VPS13AQ96RL7 3174 aa0.53□□□□□ -2.32
SGMS2-201ENST00000359079 HTN3P15516 51 aa0.52□□□□□ -2.33
SGMS2-201ENST00000359079 CD52P31358 61 aa0.51□□□□□ -2.33
SGMS2-201ENST00000359079 PCNTO95613 3336 aa0.5□□□□□ -2.33
SGMS2-201ENST00000359079 EYSQ5T1H1 3165 aa0.5□□□□□ -2.33
SGMS2-201ENST00000359079 DEFB4AO15263 64 aa0.49□□□□□ -2.33
SGMS2-201ENST00000359079 VCANP13611 3396 aa0.48□□□□□ -2.33
SGMS2-201ENST00000359079 MT1EP04732 61 aa0.48□□□□□ -2.33
SGMS2-201ENST00000359079 CENPEQ02224 2701 aa0.47□□□□□ -2.33
SGMS2-201ENST00000359079 LRP2P98164 4655 aa0.47□□□□□ -2.33
SGMS2-201ENST00000359079 PHGR1C9JFL3 82 aa0.47□□□□□ -2.33
SGMS2-201ENST00000359079 GOLGB1Q14789 3259 aaKnown RBP0.47□□□□□ -2.33
SGMS2-201ENST00000359079 STARD9Q9P2P6 4700 aa0.46□□□□□ -2.34
SGMS2-201ENST00000359079 WDFY3Q8IZQ1 3526 aa0.46□□□□□ -2.34
SGMS2-201ENST00000359079 TLN1Q9Y490 2541 aaKnown RBP0.45□□□□□ -2.34
SGMS2-201ENST00000359079 BRCA2P51587 3418 aa0.45□□□□□ -2.34
SGMS2-201ENST00000359079 MT1HP80294 61 aa0.44□□□□□ -2.34
SGMS2-201ENST00000359079 EP400Q96L91 3159 aa0.44□□□□□ -2.34
SGMS2-201ENST00000359079 MT1LQ93083 61 aa0.44□□□□□ -2.34
SGMS2-201ENST00000359079 BIRC6Q9NR09 4857 aa0.38□□□□□ -2.35
SGMS2-201ENST00000359079 USH2AO75445 5202 aa0.38□□□□□ -2.35
SGMS2-201ENST00000359079 CENPFP49454 3210 aa0.37□□□□□ -2.35
SGMS2-201ENST00000359079 MYO9AB2RTY4 2548 aa0.37□□□□□ -2.35
SGMS2-201ENST00000359079 MT1XP80297 61 aa0.35□□□□□ -2.35
SGMS2-201ENST00000359079 DNAH14Q0VDD8 3507 aa0.35□□□□□ -2.35
SGMS2-201ENST00000359079 DNHD1Q96M86 4753 aa0.34□□□□□ -2.35
SGMS2-201ENST00000359079 MUC12Q9UKN1 5478 aa0.34□□□□□ -2.35
SGMS2-201ENST00000359079 SPRR2GQ9BYE4 73 aa0.33□□□□□ -2.36
SGMS2-201ENST00000359079 MT1GP13640 62 aa0.33□□□□□ -2.36
SGMS2-201ENST00000359079 HERC2O95714 4834 aa0.29□□□□□ -2.36
SGMS2-201ENST00000359079 KRTAP6-1Q3LI64 71 aa0.27□□□□□ -2.37
SGMS2-201ENST00000359079 KRTAP19-7Q3SYF9 63 aa0.27□□□□□ -2.37
SGMS2-201ENST00000359079 CDH23Q9H251 3354 aa0.25□□□□□ -2.37
SGMS2-201ENST00000359079 KRTAP19-8Q3LI54 63 aa0.21□□□□□ -2.38
SGMS2-201ENST00000359079 MT2AP02795 61 aa0.17□□□□□ -2.38
SGMS2-201ENST00000359079 MT1MQ8N339 61 aa0.16□□□□□ -2.38
SGMS2-201ENST00000359079 MT1BP07438 61 aa0.13□□□□□ -2.39
SGMS2-201ENST00000359079 KRTAP19-2Q3LHN2 52 aa0.12□□□□□ -2.39
SGMS2-201ENST00000359079 KRTAP19-6Q3LI70 58 aa0.1□□□□□ -2.39
SGMS2-201ENST00000359079 MT1HL1P0DM35 61 aa0.06□□□□□ -2.4
SGMS2-201ENST00000359079 MT4P47944 62 aa0.06□□□□□ -2.4
SGMS2-201ENST00000359079 KRTAP20-2Q3LI61 65 aa0.03□□□□□ -2.41
SGMS2-201ENST00000359079 MT1FP04733 61 aa-0.03□□□□□ -2.41
Retrieved 77 of 20,778 RNA–protein pairs in 196.5 ms