RNA–Protein interactions for RNA: ENST00000346991.9

KNL1-201, Transcript of kinetochore scaffold 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene KNL1, Length 9,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-201ENST00000346991 FAT3Q8TDW7 4589 aa1.99□□□□□ -2.09
KNL1-201ENST00000346991 KRTAP4-9Q9BYQ8 210 aa1.98□□□□□ -2.09
KNL1-201ENST00000346991 TNXBP22105 4242 aa1.97□□□□□ -2.09
KNL1-201ENST00000346991 KRTAP9-9Q9BYP9 154 aa1.97□□□□□ -2.09
KNL1-201ENST00000346991 KRTAP2-2Q9BYT5 123 aa1.97□□□□□ -2.09
KNL1-201ENST00000346991 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.96□□□□□ -2.1
KNL1-201ENST00000346991 KRTAP6-3Q3LI67 103 aa1.94□□□□□ -2.1
KNL1-201ENST00000346991 KRTAP6-2Q3LI66 62 aa1.93□□□□□ -2.1
KNL1-201ENST00000346991 KRTAP4-3Q9BYR4 195 aa1.92□□□□□ -2.1
KNL1-201ENST00000346991 KRTAP9-4Q9BYQ2 154 aa1.9□□□□□ -2.1
KNL1-201ENST00000346991 MYCBP2O75592 4640 aa1.87□□□□□ -2.11
KNL1-201ENST00000346991 DNHD1Q96M86 4753 aa1.86□□□□□ -2.11
KNL1-201ENST00000346991 RYR1P21817 5038 aa1.84□□□□□ -2.12
KNL1-201ENST00000346991 SYNE2Q8WXH0 6885 aaKnown RBP1.83□□□□□ -2.12
KNL1-201ENST00000346991 KRTAP6-1Q3LI64 71 aa1.82□□□□□ -2.12
KNL1-201ENST00000346991 KRTAP19-7Q3SYF9 63 aa1.81□□□□□ -2.12
KNL1-201ENST00000346991 LPAP08519 4548 aa1.8□□□□□ -2.12
KNL1-201ENST00000346991 RYR3Q15413 4870 aa1.79□□□□□ -2.12
KNL1-201ENST00000346991 KRTAP19-2Q3LHN2 52 aa1.77□□□□□ -2.13
KNL1-201ENST00000346991 FSIP2Q5CZC0 6907 aa1.74□□□□□ -2.13
KNL1-201ENST00000346991 MUC17Q685J3 4493 aa1.72□□□□□ -2.13
KNL1-201ENST00000346991 HERC2O95714 4834 aa1.7□□□□□ -2.14
KNL1-201ENST00000346991 KRTAP20-2Q3LI61 65 aa1.67□□□□□ -2.14
KNL1-201ENST00000346991 PCLOQ9Y6V0 5065 aa1.64□□□□□ -2.15
KNL1-201ENST00000346991 HYDINQ4G0P3 5121 aa1.63□□□□□ -2.15
KNL1-201ENST00000346991 LRP2P98164 4655 aa1.63□□□□□ -2.15
KNL1-201ENST00000346991 KRTAP4-11Q9BYQ6 195 aa1.6□□□□□ -2.15
KNL1-201ENST00000346991 KMT2CQ8NEZ4 4911 aaKnown RBP1.57□□□□□ -2.16
KNL1-201ENST00000346991 BIRC6Q9NR09 4857 aa1.56□□□□□ -2.16
KNL1-201ENST00000346991 KRTAP9-6A8MVA2 160 aa1.55□□□□□ -2.16
KNL1-201ENST00000346991 KIAA1109Q2LD37 5005 aa1.55□□□□□ -2.16
KNL1-201ENST00000346991 HERC1Q15751 4861 aa1.54□□□□□ -2.16
KNL1-201ENST00000346991 KRTAP4-6Q9BYQ5 205 aa1.52□□□□□ -2.17
KNL1-201ENST00000346991 EPPK1P58107 5090 aaKnown RBP1.52□□□□□ -2.17
KNL1-201ENST00000346991 RYR2Q92736 4967 aa1.51□□□□□ -2.17
KNL1-201ENST00000346991 KRTAP4-12Q9BQ66 201 aa1.5□□□□□ -2.17
KNL1-201ENST00000346991 KRTAP4-2Q9BYR5 136 aa1.5□□□□□ -2.17
KNL1-201ENST00000346991 KRTAP4-4Q9BYR3 166 aa1.46□□□□□ -2.18
KNL1-201ENST00000346991 KRTAP5-4Q6L8H1 288 aa1.44□□□□□ -2.18
KNL1-201ENST00000346991 HMCN2Q8NDA2 5059 aa1.44□□□□□ -2.18
KNL1-201ENST00000346991 SYNE1Q8NF91 8797 aaKnown RBP1.44□□□□□ -2.18
KNL1-201ENST00000346991 ABCA13Q86UQ4 5058 aa1.43□□□□□ -2.18
KNL1-201ENST00000346991 MUC2Q02817 5179 aa1.43□□□□□ -2.18
KNL1-201ENST00000346991 KRTAP5-9P26371 169 aa1.43□□□□□ -2.18
KNL1-201ENST00000346991 NEBP20929 6669 aa1.42□□□□□ -2.18
KNL1-201ENST00000346991 MACF1Q9UPN3 7388 aaKnown RBP1.38□□□□□ -2.19
KNL1-201ENST00000346991 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
KNL1-201ENST00000346991 FAT4Q6V0I7 4981 aa1.3□□□□□ -2.2
KNL1-201ENST00000346991 OBSCNQ5VST9 7968 aa1.3□□□□□ -2.2
KNL1-201ENST00000346991 RNF213Q63HN8 5207 aa1.3□□□□□ -2.2
KNL1-201ENST00000346991 KRTAP5-5Q701N2 237 aaPredicted RBP1.3□□□□□ -2.2
KNL1-201ENST00000346991 GPR98Q8WXG9 6306 aa1.29□□□□□ -2.2
KNL1-201ENST00000346991 UBR4Q5T4S7 5183 aa1.27□□□□□ -2.21
KNL1-201ENST00000346991 DSTQ03001 7570 aaKnown RBP1.26□□□□□ -2.21
KNL1-201ENST00000346991 KRTAP5-3Q6L8H2 238 aa1.25□□□□□ -2.21
KNL1-201ENST00000346991 MUC5ACP98088 5654 aa1.18□□□□□ -2.22
KNL1-201ENST00000346991 KMT2DO14686 5537 aa1.18□□□□□ -2.22
KNL1-201ENST00000346991 USH2AO75445 5202 aa1.16□□□□□ -2.22
KNL1-201ENST00000346991 MDN1Q9NU22 5596 aa1.16□□□□□ -2.22
KNL1-201ENST00000346991 KRTAP5-8O75690 187 aa1.12□□□□□ -2.23
KNL1-201ENST00000346991 MUC12Q9UKN1 5478 aa1.1□□□□□ -2.23
KNL1-201ENST00000346991 FCGBPQ9Y6R7 5405 aaPredicted RBP1.1□□□□□ -2.23
KNL1-201ENST00000346991 SSPOA2VEC9 5147 aa1.08□□□□□ -2.24
KNL1-201ENST00000346991 MUC5BQ9HC84 5762 aaPredicted RBP1.04□□□□□ -2.24
KNL1-201ENST00000346991 KRTAP5-2Q701N4 177 aa1.01□□□□□ -2.25
KNL1-201ENST00000346991 MUC19Q7Z5P9 8384 aa1□□□□□ -2.25
KNL1-201ENST00000346991 KRTAP5-10Q6L8G5 202 aa0.99□□□□□ -2.25
KNL1-201ENST00000346991 HMCN1Q96RW7 5635 aa0.97□□□□□ -2.25
KNL1-201ENST00000346991 KRTAP5-11Q6L8G4 156 aa0.96□□□□□ -2.26
KNL1-201ENST00000346991 AHNAK2Q8IVF2 5795 aa0.93□□□□□ -2.26
KNL1-201ENST00000346991 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
KNL1-201ENST00000346991 KRTAP21-2Q3LI59 83 aa0.89□□□□□ -2.27
KNL1-201ENST00000346991 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.89□□□□□ -2.27
KNL1-201ENST00000346991 KRTAP5-1Q6L8H4 278 aa0.88□□□□□ -2.27
KNL1-201ENST00000346991 AHNAKQ09666 5890 aaKnown RBP0.85□□□□□ -2.27
KNL1-201ENST00000346991 KRTAP5-7Q6L8G8 165 aa0.84□□□□□ -2.28
KNL1-201ENST00000346991 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 13.7 ms