RNA–Protein interactions for RNA: ENST00000338517.8

SCOC-201, Transcript of short coiled-coil protein, humanhuman

TSL 4 BASIC

Gene SCOC, Length 1,864 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCOC-201ENST00000338517 FLNAP21333 2647 aaKnown RBP0.49□□□□□ -2.33
SCOC-201ENST00000338517 EP400Q96L91 3159 aa0.49□□□□□ -2.33
SCOC-201ENST00000338517 DEFB124Q8NES8 71 aa0.48□□□□□ -2.33
SCOC-201ENST00000338517 U3KQA8 63 aa0.48□□□□□ -2.33
SCOC-201ENST00000338517 MAP1AP78559 2803 aaPredicted RBP0.48□□□□□ -2.33
SCOC-201ENST00000338517 NIPBLQ6KC79 2804 aaeCLIP0.48□□□□□ -2.33
SCOC-201ENST00000338517 LAMA2P24043 3122 aaKnown RBP0.48□□□□□ -2.33
SCOC-201ENST00000338517 KRTAP8-1Q8IUC2 63 aa0.48□□□□□ -2.33
SCOC-201ENST00000338517 DNAH17Q9UFH2 4485 aa0.47□□□□□ -2.33
SCOC-201ENST00000338517 STAB2Q8WWQ8 2551 aa0.47□□□□□ -2.33
SCOC-201ENST00000338517 LAMA1P25391 3075 aa0.47□□□□□ -2.33
SCOC-201ENST00000338517 TLN2Q9Y4G6 2542 aa0.47□□□□□ -2.33
SCOC-201ENST00000338517 A0A096LPF7 62 aa0.47□□□□□ -2.33
SCOC-201ENST00000338517 WDFY3Q8IZQ1 3526 aa0.47□□□□□ -2.33
SCOC-201ENST00000338517 PCNTO95613 3336 aa0.47□□□□□ -2.33
SCOC-201ENST00000338517 TENM3Q9P273 2699 aa0.46□□□□□ -2.34
SCOC-201ENST00000338517 HERC2O95714 4834 aa0.46□□□□□ -2.34
SCOC-201ENST00000338517 ITPR2Q14571 2701 aa0.46□□□□□ -2.34
SCOC-201ENST00000338517 TEX15Q9BXT5 2789 aa0.46□□□□□ -2.34
SCOC-201ENST00000338517 DNAH5Q8TE73 4624 aa0.45□□□□□ -2.34
SCOC-201ENST00000338517 CFAP46Q8IYW2 2715 aa0.45□□□□□ -2.34
SCOC-201ENST00000338517 TGP01266 2768 aa0.44□□□□□ -2.34
SCOC-201ENST00000338517 DNAH14Q0VDD8 3507 aa0.44□□□□□ -2.34
SCOC-201ENST00000338517 SMR3BP02814 79 aaPredicted RBP0.44□□□□□ -2.34
SCOC-201ENST00000338517 LPAP08519 4548 aa0.43□□□□□ -2.34
SCOC-201ENST00000338517 EYSQ5T1H1 3165 aa0.43□□□□□ -2.34
SCOC-201ENST00000338517 SPRR2DP22532 72 aa0.41□□□□□ -2.34
SCOC-201ENST00000338517 KRTAP19-5Q3LI72 72 aa0.41□□□□□ -2.34
SCOC-201ENST00000338517 LINC01556Q5JQF7 62 aa0.41□□□□□ -2.34
SCOC-201ENST00000338517 SPTAN1Q13813 2472 aaKnown RBP0.41□□□□□ -2.34
SCOC-201ENST00000338517 DEFB133Q30KQ1 61 aa0.41□□□□□ -2.34
SCOC-201ENST00000338517 KRTAP21-1Q3LI58 79 aa0.41□□□□□ -2.34
SCOC-201ENST00000338517 KRTAP6-2Q3LI66 62 aa0.41□□□□□ -2.34
SCOC-201ENST00000338517 MUC17Q685J3 4493 aa0.41□□□□□ -2.34
SCOC-201ENST00000338517 DYNC1H1Q14204 4646 aaKnown RBP0.41□□□□□ -2.34
SCOC-201ENST00000338517 NBEAL1Q6ZS30 2694 aa0.41□□□□□ -2.34
SCOC-201ENST00000338517 USH2AO75445 5202 aa0.4□□□□□ -2.34
SCOC-201ENST00000338517 DNHD1Q96M86 4753 aa0.4□□□□□ -2.34
SCOC-201ENST00000338517 LRP1BQ9NZR2 4599 aa0.4□□□□□ -2.35
SCOC-201ENST00000338517 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
SCOC-201ENST00000338517 MT1AP04731 61 aa0.39□□□□□ -2.35
SCOC-201ENST00000338517 CENPEQ02224 2701 aa0.39□□□□□ -2.35
SCOC-201ENST00000338517 CDH23Q9H251 3354 aa0.39□□□□□ -2.35
SCOC-201ENST00000338517 MGAM2Q2M2H8 2515 aa0.39□□□□□ -2.35
SCOC-201ENST00000338517 SPRR2BP35325 72 aa0.39□□□□□ -2.35
SCOC-201ENST00000338517 STARD9Q9P2P6 4700 aa0.38□□□□□ -2.35
SCOC-201ENST00000338517 RPS29P62273 56 aaKnown RBP0.38□□□□□ -2.35
SCOC-201ENST00000338517 CEP295Q9C0D2 2601 aa0.38□□□□□ -2.35
SCOC-201ENST00000338517 Q9Y3F1 56 aa0.37□□□□□ -2.35
SCOC-201ENST00000338517 SPRR2AP35326 72 aa0.36□□□□□ -2.35
SCOC-201ENST00000338517 TLN1Q9Y490 2541 aaKnown RBP0.35□□□□□ -2.35
SCOC-201ENST00000338517 LRP2P98164 4655 aa0.35□□□□□ -2.35
SCOC-201ENST00000338517 SPRR2FQ96RM1 72 aa0.35□□□□□ -2.35
SCOC-201ENST00000338517 MYO9AB2RTY4 2548 aa0.34□□□□□ -2.36
SCOC-201ENST00000338517 HTN3P15516 51 aa0.33□□□□□ -2.36
SCOC-201ENST00000338517 SPRR2EP22531 72 aa0.33□□□□□ -2.36
SCOC-201ENST00000338517 MUC12Q9UKN1 5478 aa0.32□□□□□ -2.36
SCOC-201ENST00000338517 CD52P31358 61 aa0.31□□□□□ -2.36
SCOC-201ENST00000338517 DEFB4AO15263 64 aa0.31□□□□□ -2.36
SCOC-201ENST00000338517 MT1EP04732 61 aa0.29□□□□□ -2.36
SCOC-201ENST00000338517 MT1HP80294 61 aa0.26□□□□□ -2.37
SCOC-201ENST00000338517 MT1LQ93083 61 aa0.26□□□□□ -2.37
SCOC-201ENST00000338517 SPRR2GQ9BYE4 73 aa0.24□□□□□ -2.37
SCOC-201ENST00000338517 MT1XP80297 61 aa0.22□□□□□ -2.37
SCOC-201ENST00000338517 MT1GP13640 62 aa0.2□□□□□ -2.38
SCOC-201ENST00000338517 KRTAP19-7Q3SYF9 63 aa0.19□□□□□ -2.38
SCOC-201ENST00000338517 KRTAP6-1Q3LI64 71 aa0.18□□□□□ -2.38
SCOC-201ENST00000338517 KRTAP19-8Q3LI54 63 aa0.17□□□□□ -2.38
SCOC-201ENST00000338517 KRTAP19-6Q3LI70 58 aa0.17□□□□□ -2.38
SCOC-201ENST00000338517 KRTAP19-2Q3LHN2 52 aa0.14□□□□□ -2.39
SCOC-201ENST00000338517 MT1BP07438 61 aa0.14□□□□□ -2.39
SCOC-201ENST00000338517 MT2AP02795 61 aa0.13□□□□□ -2.39
SCOC-201ENST00000338517 MT1MQ8N339 61 aa0.13□□□□□ -2.39
SCOC-201ENST00000338517 MT4P47944 62 aa0.1□□□□□ -2.39
SCOC-201ENST00000338517 MT1HL1P0DM35 61 aa0.07□□□□□ -2.4
SCOC-201ENST00000338517 MT1FP04733 61 aa0.04□□□□□ -2.4
SCOC-201ENST00000338517 KRTAP20-2Q3LI61 65 aa0.01□□□□□ -2.41
Retrieved 77 of 20,778 RNA–protein pairs in 6.2 ms