RNA–Protein interactions for RNA: ENST00000337554.7

TSPO-202, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPO, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-202ENST00000337554 MT1LQ93083 61 aa5.32□□□□□ -1.56
TSPO-202ENST00000337554 SEC61GP60059 68 aa5.3□□□□□ -1.56
TSPO-202ENST00000337554 KRTAP19-5Q3LI72 72 aa5.3□□□□□ -1.56
TSPO-202ENST00000337554 SERP1Q9Y6X1 66 aa5.29□□□□□ -1.56
TSPO-202ENST00000337554 KRTAP12-4P60329 112 aa5.27□□□□□ -1.57
TSPO-202ENST00000337554 KRTAP5-5Q701N2 237 aaPredicted RBP5.27□□□□□ -1.57
TSPO-202ENST00000337554 SYNE1Q8NF91 8797 aaKnown RBP5.25□□□□□ -1.57
TSPO-202ENST00000337554 RPS28P62857 69 aaKnown RBP5.23□□□□□ -1.57
TSPO-202ENST00000337554 KRTAP13-4Q3LI77 160 aa5.2□□□□□ -1.58
TSPO-202ENST00000337554 KRTAP9-9Q9BYP9 154 aa5.2□□□□□ -1.58
TSPO-202ENST00000337554 A0A1B0GU69 56 aa5.19□□□□□ -1.58
TSPO-202ENST00000337554 A0A1B0GU33 70 aa5.17□□□□□ -1.58
TSPO-202ENST00000337554 KRTAP5-2Q701N4 177 aa5.14□□□□□ -1.59
TSPO-202ENST00000337554 CAMK2N1Q7Z7J9 78 aa5.13□□□□□ -1.59
TSPO-202ENST00000337554 SMIM26A0A096LP01 95 aa5.12□□□□□ -1.59
TSPO-202ENST00000337554 SPATA8Q6RVD6 105 aa5.12□□□□□ -1.59
TSPO-202ENST00000337554 LINC01558Q9Y6Z2 57 aa5.11□□□□□ -1.59
TSPO-202ENST00000337554 A0A0D9SG42 100 aa5.1□□□□□ -1.59
TSPO-202ENST00000337554 PRR15LQ9BU68 103 aa5.1□□□□□ -1.59
TSPO-202ENST00000337554 LOC100996750A0A140TA64 210 aa5.07□□□□□ -1.6
TSPO-202ENST00000337554 V9GYY9 64 aa5.07□□□□□ -1.6
TSPO-202ENST00000337554 Q1T7F1 81 aa5.03□□□□□ -1.6
TSPO-202ENST00000337554 SPINT4Q6UDR6 99 aa5.02□□□□□ -1.61
TSPO-202ENST00000337554 OBSCNQ5VST9 7968 aa5.01□□□□□ -1.61
TSPO-202ENST00000337554 PSPHP1O15172 72 aa5□□□□□ -1.61
TSPO-202ENST00000337554 A8MU10 97 aa4.98□□□□□ -1.61
TSPO-202ENST00000337554 KRTAP12-1P59990 96 aa4.98□□□□□ -1.61
TSPO-202ENST00000337554 UQCR11O14957 56 aa4.93□□□□□ -1.62
TSPO-202ENST00000337554 MIR22HGQ0VDD5 57 aa4.84□□□□□ -1.63
TSPO-202ENST00000337554 A6NED7 52 aa4.81□□□□□ -1.64
TSPO-202ENST00000337554 C10orf95Q9H7T3 257 aa4.8□□□□□ -1.64
TSPO-202ENST00000337554 LCE3AQ5TA76 89 aa4.77□□□□□ -1.65
TSPO-202ENST00000337554 KRTAP5-1Q6L8H4 278 aa4.77□□□□□ -1.65
TSPO-202ENST00000337554 K7ERS5 55 aa4.73□□□□□ -1.65
TSPO-202ENST00000337554 BRK1Q8WUW1 75 aa4.73□□□□□ -1.65
TSPO-202ENST00000337554 TNP1P09430 55 aa4.71□□□□□ -1.66
TSPO-202ENST00000337554 CDC42SE1Q9NRR8 79 aa4.7□□□□□ -1.66
TSPO-202ENST00000337554 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
TSPO-202ENST00000337554 PRO0628Q9UI54 55 aa4.65□□□□□ -1.67
TSPO-202ENST00000337554 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
TSPO-202ENST00000337554 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
TSPO-202ENST00000337554 KRTAP25-1Q3LHN0 102 aa4.55□□□□□ -1.68
TSPO-202ENST00000337554 KRTAP12-3P60328 96 aa4.54□□□□□ -1.68
TSPO-202ENST00000337554 MT1AP04731 61 aa4.48□□□□□ -1.69
TSPO-202ENST00000337554 PMAIP1Q13794 54 aa4.47□□□□□ -1.69
TSPO-202ENST00000337554 ROMO1P60602 79 aa4.43□□□□□ -1.7
TSPO-202ENST00000337554 KRTAP23-1A1A580 65 aa4.37□□□□□ -1.71
TSPO-202ENST00000337554 KTN1-AS1Q86SY8 53 aa4.32□□□□□ -1.72
TSPO-202ENST00000337554 KRTAP19-4Q3LI73 84 aa4.29□□□□□ -1.72
TSPO-202ENST00000337554 SVIPQ8NHG7 77 aa4.27□□□□□ -1.73
TSPO-202ENST00000337554 KRTAP15-1Q3LI76 137 aa4.21□□□□□ -1.74
TSPO-202ENST00000337554 PRAC1Q96KF2 57 aa4.17□□□□□ -1.74
TSPO-202ENST00000337554 LCE3CQ5T5A8 94 aa4.15□□□□□ -1.75
TSPO-202ENST00000337554 MT3P25713 68 aa4.11□□□□□ -1.75
TSPO-202ENST00000337554 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
TSPO-202ENST00000337554 KRTAP4-12Q9BQ66 201 aa4.05□□□□□ -1.76
TSPO-202ENST00000337554 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
TSPO-202ENST00000337554 KRTAP9-6A8MVA2 160 aa3.97□□□□□ -1.77
TSPO-202ENST00000337554 PHGR1C9JFL3 82 aa3.93□□□□□ -1.78
TSPO-202ENST00000337554 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
TSPO-202ENST00000337554 KRTAP5-11Q6L8G4 156 aa3.88□□□□□ -1.79
TSPO-202ENST00000337554 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
TSPO-202ENST00000337554 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
TSPO-202ENST00000337554 LUZP6Q538Z0 58 aa3.51□□□□□ -1.85
TSPO-202ENST00000337554 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
TSPO-202ENST00000337554 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
TSPO-202ENST00000337554 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
TSPO-202ENST00000337554 A0A0A0MQY5 61 aa3.05□□□□□ -1.92
TSPO-202ENST00000337554 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
TSPO-202ENST00000337554 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
TSPO-202ENST00000337554 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
TSPO-202ENST00000337554 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
TSPO-202ENST00000337554 H3BS24 57 aa2.95□□□□□ -1.94
TSPO-202ENST00000337554 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
TSPO-202ENST00000337554 INE1O15225 51 aa2.83□□□□□ -1.96
TSPO-202ENST00000337554 PRM1P04553 51 aa2.31□□□□□ -2.04
TSPO-202ENST00000337554 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 97.5 ms