RNA–Protein interactions for RNA: ENST00000337554.7

TSPO-202, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPO, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-202ENST00000337554 NISCHQ9Y2I1 1504 aa40.93■■■■■ 4.14
TSPO-202ENST00000337554 ABCC9O60706 1549 aa38.83■■■■□ 3.81
TSPO-202ENST00000337554 DNAJC5BQ9UF47 199 aa37.95■■■■□ 3.67
TSPO-202ENST00000337554 CCDC180Q9P1Z9 1646 aa37.28■■■■□ 3.56
TSPO-202ENST00000337554 RB1CC1Q8TDY2 1594 aa36.21■■■■□ 3.39
TSPO-202ENST00000337554 PABPN1Q86U42 306 aaKnown RBP eCLIP35.95■■■■□ 3.35
TSPO-202ENST00000337554 DNAJC5Q9H3Z4 198 aa35.83■■■■□ 3.33
TSPO-202ENST00000337554 NACADO15069 1562 aa35.63■■■■□ 3.29
TSPO-202ENST00000337554 UNC13AQ9UPW8 1703 aa35.45■■■■□ 3.27
TSPO-202ENST00000337554 BICRAQ9NZM4 1560 aa35.38■■■■□ 3.25
TSPO-202ENST00000337554 CECR2Q9BXF3 1484 aa35.12■■■■□ 3.21
TSPO-202ENST00000337554 DCAF8L2P0C7V8 631 aa35.09■■■■□ 3.21
TSPO-202ENST00000337554 CC2D2AQ9P2K1 1620 aa34.99■■■■□ 3.19
TSPO-202ENST00000337554 MYO15BQ96JP2 1530 aa34.69■■■■□ 3.14
TSPO-202ENST00000337554 SHROOM4Q9ULL8 1493 aa34.59■■■■□ 3.13
TSPO-202ENST00000337554 EIF4G1Q04637 1599 aaKnown RBP34.55■■■■□ 3.12
TSPO-202ENST00000337554 CUX2O14529 1486 aa34.04■■■■□ 3.04
TSPO-202ENST00000337554 SCRIBQ14160 1630 aa33.9■■■■□ 3.02
TSPO-202ENST00000337554 DCAF1Q9Y4B6 1507 aa33.69■■■□□ 2.98
TSPO-202ENST00000337554 ZCCHC6Q5VYS8 1495 aaKnown RBP33.6■■■□□ 2.97
TSPO-202ENST00000337554 TRIM41Q8WV44 630 aa33.53■■■□□ 2.96
TSPO-202ENST00000337554 ERCC6Q03468 1493 aa33.52■■■□□ 2.96
TSPO-202ENST00000337554 NCAPD3P42695 1498 aa32.99■■■□□ 2.87
TSPO-202ENST00000337554 NESP48681 1621 aa32.99■■■□□ 2.87
TSPO-202ENST00000337554 THOC2Q8NI27 1593 aaKnown RBP32.91■■■□□ 2.86
TSPO-202ENST00000337554 ATAD2BQ9ULI0 1458 aa32.67■■■□□ 2.82
TSPO-202ENST00000337554 HMGXB3Q12766 1538 aa32.55■■■□□ 2.8
TSPO-202ENST00000337554 SMARCA2P51531 1590 aa32.53■■■□□ 2.8
TSPO-202ENST00000337554 KIF21AQ7Z4S6 1674 aa32.41■■■□□ 2.78
TSPO-202ENST00000337554 LAMC3Q9Y6N6 1575 aa32.4■■■□□ 2.78
TSPO-202ENST00000337554 BAZ1AQ9NRL2 1556 aaPredicted RBP32.28■■■□□ 2.76
TSPO-202ENST00000337554 PDS5BQ9NTI5 1447 aa32.26■■■□□ 2.75
TSPO-202ENST00000337554 OSCARQ8IYS5 282 aa32.24■■■□□ 2.75
TSPO-202ENST00000337554 SMARCA4P51532 1647 aa32.21■■■□□ 2.75
TSPO-202ENST00000337554 BAZ1BQ9UIG0 1483 aaKnown RBP32.19■■■□□ 2.74
TSPO-202ENST00000337554 WDR62O43379 1518 aa32.1■■■□□ 2.73
TSPO-202ENST00000337554 MRC2Q9UBG0 1479 aa32.1■■■□□ 2.73
TSPO-202ENST00000337554 RIMBP3CA6NJZ7 1639 aa32■■■□□ 2.71
TSPO-202ENST00000337554 RIMBP3BA6NNM3 1639 aa32■■■□□ 2.71
TSPO-202ENST00000337554 RIMBP3Q9UFD9 1639 aa32■■■□□ 2.71
TSPO-202ENST00000337554 PEG3Q9GZU2 1588 aa31.94■■■□□ 2.7
TSPO-202ENST00000337554 CADPSQ9ULU8 1353 aa31.9■■■□□ 2.7
TSPO-202ENST00000337554 AEBP2Q6ZN18 517 aaPredicted RBP31.78■■■□□ 2.68
TSPO-202ENST00000337554 ARHGEF11O15085 1522 aa31.76■■■□□ 2.68
TSPO-202ENST00000337554 TRHP20396 242 aaPredicted RBP31.66■■■□□ 2.66
TSPO-202ENST00000337554 CEP164Q9UPV0 1460 aa31.64■■■□□ 2.66
TSPO-202ENST00000337554 CYB5RLQ6IPT4 315 aa31.61■■■□□ 2.65
TSPO-202ENST00000337554 MROH2BQ7Z745 1585 aa31.56■■■□□ 2.64
TSPO-202ENST00000337554 FANCD2Q9BXW9 1451 aa31.52■■■□□ 2.64
TSPO-202ENST00000337554 URB2Q14146 1524 aaKnown RBP31.41■■■□□ 2.62
TSPO-202ENST00000337554 ARAP1Q96P48 1450 aa31.39■■■□□ 2.62
TSPO-202ENST00000337554 ZNF608Q9ULD9 1512 aaPredicted RBP31.29■■■□□ 2.6
TSPO-202ENST00000337554 CFTRP13569 1480 aa31.24■■■□□ 2.59
TSPO-202ENST00000337554 IFT140Q96RY7 1462 aa31.08■■■□□ 2.57
TSPO-202ENST00000337554 WIZO95785 1651 aa31.06■■■□□ 2.56
TSPO-202ENST00000337554 RSF1Q96T23 1441 aaPredicted RBP31.05■■■□□ 2.56
TSPO-202ENST00000337554 CHD1O14646 1710 aa30.97■■■□□ 2.55
TSPO-202ENST00000337554 EIF4G3O43432 1585 aaKnown RBP30.94■■■□□ 2.54
TSPO-202ENST00000337554 ILDR1Q86SU0 546 aaPredicted RBP30.85■■■□□ 2.53
TSPO-202ENST00000337554 AQRO60306 1485 aaKnown RBP eCLIP30.79■■■□□ 2.521e-6■■■■□ 25.3
TSPO-202ENST00000337554 FBLN2P98095 1184 aa30.77■■■□□ 2.52
TSPO-202ENST00000337554 TOPBP1Q92547 1522 aa30.77■■■□□ 2.52
TSPO-202ENST00000337554 CLASP1Q7Z460 1538 aa30.67■■■□□ 2.5
TSPO-202ENST00000337554 PRDM2Q13029 1718 aa30.64■■■□□ 2.5
TSPO-202ENST00000337554 TARBP1Q13395 1621 aaKnown RBP30.62■■■□□ 2.49
TSPO-202ENST00000337554 TOP2AP11388 1531 aaKnown RBP30.52■■■□□ 2.48
TSPO-202ENST00000337554 ABCC8Q09428 1581 aa30.49■■■□□ 2.47
TSPO-202ENST00000337554 DNMBPQ6XZF7 1577 aa30.47■■■□□ 2.47
TSPO-202ENST00000337554 GAPVD1Q14C86 1478 aa30.42■■■□□ 2.46
TSPO-202ENST00000337554 SYNJ1O43426 1573 aa30.39■■■□□ 2.46
TSPO-202ENST00000337554 SNAPC4Q5SXM2 1469 aa30.38■■■□□ 2.45
TSPO-202ENST00000337554 POLA1P09884 1462 aaPredicted RBP30.37■■■□□ 2.45
TSPO-202ENST00000337554 TDRD9Q8NDG6 1382 aaKnown RBP30.35■■■□□ 2.45
TSPO-202ENST00000337554 RAD54L2Q9Y4B4 1467 aa30.31■■■□□ 2.44
TSPO-202ENST00000337554 CHMP7Q8WUX9 453 aaPredicted RBP30.3■■■□□ 2.44
TSPO-202ENST00000337554 KDM4FA0A1W2PPD8 638 aa30.28■■■□□ 2.44
TSPO-202ENST00000337554 CCDC88BA6NC98 1476 aa30.25■■■□□ 2.43
TSPO-202ENST00000337554 MAGI1Q96QZ7 1491 aaPredicted RBP30.2■■■□□ 2.43
TSPO-202ENST00000337554 SOGA1O94964 1423 aa30.17■■■□□ 2.42
TSPO-202ENST00000337554 SYNJ2O15056 1496 aa30.14■■■□□ 2.42
TSPO-202ENST00000337554 KIF13AQ9H1H9 1805 aa30.14■■■□□ 2.42
TSPO-202ENST00000337554 ERCC6L2Q5T890 1561 aa30.13■■■□□ 2.41
TSPO-202ENST00000337554 WDR97A6NE52 1622 aa30.09■■■□□ 2.41
TSPO-202ENST00000337554 GRIN2BQ13224 1484 aa30.06■■■□□ 2.4
TSPO-202ENST00000337554 FGD5Q6ZNL6 1462 aa29.93■■■□□ 2.38
TSPO-202ENST00000337554 CEP170Q5SW79 1584 aa29.86■■■□□ 2.37
TSPO-202ENST00000337554 FAM69CQ0P6D2 419 aa29.8■■■□□ 2.36
TSPO-202ENST00000337554 ABCC10Q5T3U5 1492 aa29.8■■■□□ 2.36
TSPO-202ENST00000337554 PBRM1Q86U86 1689 aa29.79■■■□□ 2.36
TSPO-202ENST00000337554 KDM6BO15054 1643 aa29.74■■■□□ 2.35
TSPO-202ENST00000337554 SHROOM2Q13796 1616 aa29.72■■■□□ 2.35
TSPO-202ENST00000337554 CUX1P39880 1505 aa29.71■■■□□ 2.35
TSPO-202ENST00000337554 NUP160Q12769 1436 aa29.7■■■□□ 2.34
TSPO-202ENST00000337554 GRIN2AQ12879 1464 aa29.69■■■□□ 2.34
TSPO-202ENST00000337554 DIP2BQ9P265 1576 aa29.66■■■□□ 2.34
TSPO-202ENST00000337554 HECW2Q9P2P5 1572 aa29.65■■■□□ 2.34
TSPO-202ENST00000337554 ABCA5Q8WWZ7 1642 aa29.61■■■□□ 2.33
TSPO-202ENST00000337554 MAPKBP1O60336 1514 aa29.6■■■□□ 2.33
TSPO-202ENST00000337554 ADGRL1O94910 1474 aa29.57■■■□□ 2.32
TSPO-202ENST00000337554 FBXO41Q8TF61 875 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms