RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 GgctQ9D7X8 188 aa13.6□□□□□ -0.23
Scn1b-203ENSMUST00000211945 Q9D8Q6 235 aa13.6□□□□□ -0.23
Scn1b-203ENSMUST00000211945 Tcrg-C2A0A075B5Z2 167 aa13.59□□□□□ -0.23
Scn1b-203ENSMUST00000211945 Rtl10D3YWW5 146 aa13.59□□□□□ -0.23
Scn1b-203ENSMUST00000211945 P01853 167 aa13.59□□□□□ -0.23
Scn1b-203ENSMUST00000211945 Sox15P43267 231 aa13.59□□□□□ -0.23
Scn1b-203ENSMUST00000211945 Gm94Q3V2D2 93 aa13.59□□□□□ -0.23
Scn1b-203ENSMUST00000211945 Ube2tQ9CQ37 204 aa13.59□□□□□ -0.23
Scn1b-203ENSMUST00000211945 Ighv3-3A0A0A6YWL2 116 aa13.59□□□□□ -0.23
Scn1b-203ENSMUST00000211945 Gm17349F7BGH6 99 aa13.59□□□□□ -0.23
Scn1b-203ENSMUST00000211945 Rpl23P62830 140 aaKnown RBP13.59□□□□□ -0.23
Scn1b-203ENSMUST00000211945 Fam210aQ8BGY7 273 aa13.59□□□□□ -0.23
Scn1b-203ENSMUST00000211945 Fxyd4Q9D2W0 88 aa13.59□□□□□ -0.23
Scn1b-203ENSMUST00000211945 BlnkQ9QUN3 457 aa13.59□□□□□ -0.23
Scn1b-203ENSMUST00000211945 Rabac1Q9Z0S9 185 aa13.59□□□□□ -0.23
Scn1b-203ENSMUST00000211945 Ighv1-75A0A075B5Y2 117 aa13.58□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Ighv8-4A0A0A6YW26 117 aa13.58□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Tcf21O35437 179 aa13.58□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Hspe1Q64433 102 aaKnown RBP13.58□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Olfr1381Q7TQT4 311 aa13.58□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Golt1bQ9CR60 138 aa13.58□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Psg18B2RSG7 476 aa13.57□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Rhox4dQ2MDG0 205 aa13.57□□□□□ -0.24
Scn1b-203ENSMUST00000211945 BC048562Q80ZQ7 204 aa13.57□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Shisa2Q8QZV2 295 aa13.57□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Olfr1295Q8VF48 312 aa13.57□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Scgb3a2Q920H1 91 aa13.57□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Cdx1P18111 268 aa13.56□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Mbd3l2Q3UXB0 228 aa13.56□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Q8R092 253 aa13.56□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Them7Q9DCP4 223 aa13.56□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Cml3Q9JIY8 226 aa13.56□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Ssna1Q9JJ94 119 aa13.56□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Spry2Q9QXV8 315 aa13.56□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Gm21616B6ZB74 166 aa13.55□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Vsig8Q6P3A4 417 aa13.55□□□□□ -0.24
Scn1b-203ENSMUST00000211945 MycbQ6P8Z1 170 aa13.55□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Gm12845A0A0N4SUM5 588 aa13.54□□□□□ -0.24
Scn1b-203ENSMUST00000211945 4933415F23RikQ14BX6 153 aa13.54□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Gm21748Q3UE70 102 aa13.54□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Prr3Q811B5 190 aaKnown RBP13.54□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Olfr498Q8VEW2 330 aa13.54□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Olfr1339Q8VGB1 315 aa13.54□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Trav16nA0A075B634 117 aa13.54□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Igkv4-68A0A0B4J1I7 117 aa13.54□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Gm5218F6YH22 154 aa13.54□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Pfn1P62962 140 aa13.54□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Tpt1P63028 172 aaKnown RBP13.54□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Cd84Q18PI6 329 aa13.54□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Morn3Q8C5T4 241 aa13.54□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Commd5Q8R395 224 aa13.54□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Olfr1367Q8VFG2 316 aa13.54□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Clec5aQ9R007 190 aa13.54□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Gm5849J3QPE5 117 aa13.53□□□□□ -0.24
Scn1b-203ENSMUST00000211945 OstcQ78XF5 149 aa13.53□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Spink2Q8BMY7 86 aa13.53□□□□□ -0.24
Scn1b-203ENSMUST00000211945 SvbpQ99LQ4 66 aa13.53□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Fmc1Q9CR13 113 aa13.53□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Rs1Q9Z1L4 224 aa13.53□□□□□ -0.24
Scn1b-203ENSMUST00000211945 Ino80eA0A0U1RP99 260 aa13.52□□□□□ -0.25
Scn1b-203ENSMUST00000211945 P01747 120 aa13.52□□□□□ -0.25
Scn1b-203ENSMUST00000211945 4930474N05RikQ8BVR5 218 aa13.52□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Ifi27l2aQ8R412 90 aa13.52□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Rnf185Q91YT2 192 aa13.52□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Trav19A0A0B4J1K4 119 aa13.51□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Ighv8-12A0A0G2JDE1 119 aa13.51□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Gm4744D3Z3S5 154 aa13.51□□□□□ -0.25
Scn1b-203ENSMUST00000211945 TcapO70548 167 aa13.51□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Tmem208Q9CR96 173 aa13.51□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Q9D7E4 109 aa13.51□□□□□ -0.25
Scn1b-203ENSMUST00000211945 P01753 117 aa13.5□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Sfrp2P97299 295 aa13.5□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Duxbl2Q7TNE6 350 aa13.5□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Uqcr10Q8R1I1 64 aa13.5□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Mrpl53Q9D1H8 118 aaKnown RBP13.5□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Plekhb2Q9QZC7 221 aa13.5□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Tmed3Q78IS1 221 aa13.49□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Gm14137Q8CE97 175 aa13.49□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Q9CRC3 126 aa13.49□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Ighv1-23A0A0A6YVW3 117 aa13.49□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Rpl19P84099 196 aaKnown RBP13.49□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Fxyd5P97808 178 aa13.49□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Olfr702Q920Z2 318 aa13.49□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Ndufa6Q9CQZ5 131 aaKnown RBP13.49□□□□□ -0.25
Scn1b-203ENSMUST00000211945 8030423J24RikQ9CX45 142 aa13.49□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Dnah3Q8BW94 4083 aa13.48□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Ighv1-5A0A0A6YWG2 117 aa13.48□□□□□ -0.25
Scn1b-203ENSMUST00000211945 4930447F04RikA2AFR2 126 aa13.48□□□□□ -0.25
Scn1b-203ENSMUST00000211945 P06328 117 aa13.48□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Oraov1Q8CH62 137 aa13.48□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Mgst1Q91VS7 155 aa13.48□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Bola1Q9D8S9 137 aaKnown RBP13.48□□□□□ -0.25
Scn1b-203ENSMUST00000211945 D730001G18RikA0A087WQU7 115 aa13.47□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Gm15056F6ZR08 88 aa13.47□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Rps20P60867 119 aaKnown RBP13.47□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Ndufa4l2Q4FZG9 87 aa13.47□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Q99M08 65 aa13.47□□□□□ -0.25
Scn1b-203ENSMUST00000211945 ChtopQ9CY57 249 aaKnown RBP13.47□□□□□ -0.25
Scn1b-203ENSMUST00000211945 MrapQ9D159 127 aa13.46□□□□□ -0.25
Scn1b-203ENSMUST00000211945 Hcfc2Q9D968 241 aa13.46□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 104.5 ms