Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Pfn1P62962 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Pfn1P62962 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
Pfn1P62962 Gm25239-201ENSMUST00000174915 86 ntBASIC25.61■■□□□ 1.69
Pfn1P62962 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pfn1P62962 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Pfn1P62962 Psd-208ENSMUST00000224556 2034 ntBASIC25.39■■□□□ 1.65
Pfn1P62962 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pfn1P62962 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pfn1P62962 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pfn1P62962 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pfn1P62962 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pfn1P62962 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pfn1P62962 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pfn1P62962 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
Pfn1P62962 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Pfn1P62962 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pfn1P62962 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pfn1P62962 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pfn1P62962 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Pfn1P62962 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Pfn1P62962 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pfn1P62962 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pfn1P62962 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.19■■□□□ 1.3
Pfn1P62962 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pfn1P62962 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pfn1P62962 Gm15042-201ENSMUST00000120212 883 ntBASIC23.09■■□□□ 1.29
Pfn1P62962 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pfn1P62962 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.99■■□□□ 1.27
Pfn1P62962 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pfn1P62962 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pfn1P62962 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.9■■□□□ 1.26
Pfn1P62962 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.88■■□□□ 1.25
Pfn1P62962 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pfn1P62962 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pfn1P62962 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pfn1P62962 Gm15045-201ENSMUST00000117359 883 ntBASIC22.66■■□□□ 1.22
Pfn1P62962 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pfn1P62962 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Pfn1P62962 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pfn1P62962 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Pfn1P62962 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.4■■□□□ 1.18
Pfn1P62962 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pfn1P62962 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pfn1P62962 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pfn1P62962 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pfn1P62962 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Pfn1P62962 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pfn1P62962 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.18■■□□□ 1.14
Pfn1P62962 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pfn1P62962 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pfn1P62962 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pfn1P62962 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pfn1P62962 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pfn1P62962 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.1■■□□□ 1.13
Pfn1P62962 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pfn1P62962 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pfn1P62962 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Pfn1P62962 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pfn1P62962 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pfn1P62962 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Pfn1P62962 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pfn1P62962 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Pfn1P62962 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pfn1P62962 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.86■■□□□ 1.09
Pfn1P62962 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.86■■□□□ 1.09
Pfn1P62962 Gm24109-201ENSMUST00000175489 103 ntBASIC21.86■■□□□ 1.09
Pfn1P62962 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pfn1P62962 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.82■■□□□ 1.08
Pfn1P62962 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pfn1P62962 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pfn1P62962 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pfn1P62962 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pfn1P62962 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pfn1P62962 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.73■■□□□ 1.07
Pfn1P62962 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pfn1P62962 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pfn1P62962 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pfn1P62962 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pfn1P62962 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pfn1P62962 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pfn1P62962 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pfn1P62962 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pfn1P62962 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pfn1P62962 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pfn1P62962 Gm23366-201ENSMUST00000175022 89 ntBASIC21.52■■□□□ 1.04
Pfn1P62962 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Pfn1P62962 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pfn1P62962 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pfn1P62962 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pfn1P62962 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.43■■□□□ 1.02
Pfn1P62962 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pfn1P62962 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pfn1P62962 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Pfn1P62962 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pfn1P62962 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pfn1P62962 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pfn1P62962 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
Pfn1P62962 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pfn1P62962 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms