RNA–Protein interactions for RNA: ENSMUST00000182709.7

Rnf4-207, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 3,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-207ENSMUST00000182709 Prr9Q8BV84 116 aa11.21□□□□□ -0.61
Rnf4-207ENSMUST00000182709 Tmem97Q8VD00 176 aa11.21□□□□□ -0.61
Rnf4-207ENSMUST00000182709 Tmem189Q99LQ7 271 aa11.21□□□□□ -0.61
Rnf4-207ENSMUST00000182709 LbhQ9CX60 105 aa11.21□□□□□ -0.61
Rnf4-207ENSMUST00000182709 GlmpQ9JHJ3 404 aa11.21□□□□□ -0.61
Rnf4-207ENSMUST00000182709 Mtatp8P03930 67 aa11.21□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Saa3P04918 122 aa11.21□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Gm10188Q3V432 135 aa11.21□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Ndfip1Q8R0W6 221 aa11.21□□□□□ -0.62
Rnf4-207ENSMUST00000182709 PpdpfQ9CR37 115 aa11.21□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Tmem262D3Z338 116 aa11.2□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Tmem241Q3UME2 297 aa11.2□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Gm9961Q8BNV2 113 aa11.2□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Arl3Q9WUL7 182 aa11.2□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Tcrg-C2A0A075B5Z2 167 aa11.2□□□□□ -0.62
Rnf4-207ENSMUST00000182709 P01853 167 aa11.2□□□□□ -0.62
Rnf4-207ENSMUST00000182709 9130213A22RikQ3V3T2 120 aa11.2□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Rchy1Q9CR50 261 aa11.19□□□□□ -0.62
Rnf4-207ENSMUST00000182709 P0C913 63 aa11.19□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Mfge8P21956 463 aaKnown RBP11.19□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Igfn1Q3KNY0 2849 aa11.19□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Smim13E9Q942 88 aa11.19□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Olfr235E9Q9Z6 312 aa11.19□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Gm17455G3UW87 128 aa11.19□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Snx22Q8C084 192 aa11.19□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Cyyr1Q8VIH7 165 aa11.19□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Q9CR34 168 aa11.19□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Gm45521A0A1B0GRK0 198 aa11.18□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Gm9242J3QNY1 357 aa11.18□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Samd10Q7TST3 202 aa11.18□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Spock3Q8BKV0 436 aa11.18□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Vmn1r197Q8R265 298 aa11.18□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Card19Q9D1I2 183 aa11.18□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Sec11aQ9R0P6 179 aa11.18□□□□□ -0.62
Rnf4-207ENSMUST00000182709 BatfO35284 125 aa11.18□□□□□ -0.62
Rnf4-207ENSMUST00000182709 CampP51437 172 aa11.18□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Olfr1199Q8VF94 310 aa11.18□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Olfr810Q8VFH9 312 aa11.18□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Tspo2Q9CRZ8 162 aa11.18□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Ighv1-77A0A0G2JGS9 117 aa11.17□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Gm11565A2A4M7 156 aa11.17□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Gm5294J3QP53 216 aa11.17□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Cited2O35740 269 aa11.17□□□□□ -0.62
Rnf4-207ENSMUST00000182709 H2-DMb1P35737 261 aa11.17□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Gm5105Q8C6Y9 112 aa11.17□□□□□ -0.62
Rnf4-207ENSMUST00000182709 AhspQ9CY02 102 aa11.17□□□□□ -0.62
Rnf4-207ENSMUST00000182709 BsnO88737 3942 aa11.17□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Ighv1-22A0A075B5U7 117 aa11.17□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Gm5089A1L3C8 106 aa11.17□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Rtl10D3YWW5 146 aa11.17□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Ebi3O35228 228 aa11.17□□□□□ -0.62
Rnf4-207ENSMUST00000182709 CrygbP04344 175 aa11.17□□□□□ -0.62
Rnf4-207ENSMUST00000182709 CtrlQ9ER05 264 aa11.17□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Xirp2Q4U4S6 3784 aa11.17□□□□□ -0.62
Rnf4-207ENSMUST00000182709 1700056E22RikF7CNM6 234 aa11.17□□□□□ -0.62
Rnf4-207ENSMUST00000182709 NpsP0C0P8 89 aa11.17□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Tmem88bQ3TYP4 173 aa11.17□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Ifi27Q8C6G0 260 aa11.17□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Helz2E9QAM5 2947 aaKnown RBP11.16□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Sprr3O09116 238 aa11.16□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Thy1P01831 162 aa11.16□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Bub3Q9WVA3 326 aa11.16□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Gm45623A0A1B0GSF6 103 aa11.16□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Plcxd2B2RXA1 340 aa11.16□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Gm10553J3QPF1 123 aa11.16□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Olfr904Q7TRC9 310 aa11.16□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Cnn3Q9DAW9 330 aaKnown RBP11.16□□□□□ -0.62
Rnf4-207ENSMUST00000182709 FlnbQ80X90 2602 aaKnown RBP11.16□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Ighv6-7A0A0A6YWU3 119 aa11.15□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Olfr1380Q7TQT5 311 aa11.15□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Klk15Q8CGR4 254 aa11.15□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Nat6Q9R123 314 aa11.15□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Gm6871L7N248 545 aa11.15□□□□□ -0.62
Rnf4-207ENSMUST00000182709 CrxO54751 299 aa11.15□□□□□ -0.62
Rnf4-207ENSMUST00000182709 P01793 123 aa11.15□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Trav2Q5R1I9 109 aa11.15□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Olfr761Q7TRJ0 323 aa11.15□□□□□ -0.62
Rnf4-207ENSMUST00000182709 D630044L22RikQ8C701 164 aa11.15□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Olfr981Q8VEU2 310 aa11.15□□□□□ -0.62
Rnf4-207ENSMUST00000182709 Ripply2Q2WG76 128 aa11.14□□□□□ -0.63
Rnf4-207ENSMUST00000182709 Mcrip2Q9CQB2 160 aaKnown RBP11.14□□□□□ -0.63
Rnf4-207ENSMUST00000182709 Gm3250E9Q1M3 230 aa11.14□□□□□ -0.63
Rnf4-207ENSMUST00000182709 Gm15056F6ZR08 88 aa11.14□□□□□ -0.63
Rnf4-207ENSMUST00000182709 Gm5426J3QNM7 103 aa11.14□□□□□ -0.63
Rnf4-207ENSMUST00000182709 Spcs1Q9D958 161 aa11.14□□□□□ -0.63
Rnf4-207ENSMUST00000182709 Rpl24Q8BP67 157 aaKnown RBP11.14□□□□□ -0.63
Rnf4-207ENSMUST00000182709 Igkv4-81A0A0G2JEY5 119 aa11.13□□□□□ -0.63
Rnf4-207ENSMUST00000182709 Try10Q792Z1 246 aaKnown RBP11.13□□□□□ -0.63
Rnf4-207ENSMUST00000182709 Ube2tQ9CQ37 204 aa11.13□□□□□ -0.63
Rnf4-207ENSMUST00000182709 Mettl26Q9DCS2 204 aa11.12□□□□□ -0.63
Rnf4-207ENSMUST00000182709 Rnf114Q9ET26 229 aa11.12□□□□□ -0.63
Rnf4-207ENSMUST00000182709 P01896 185 aa11.12□□□□□ -0.63
Rnf4-207ENSMUST00000182709 Q9CX63 252 aa11.12□□□□□ -0.63
Rnf4-207ENSMUST00000182709 Trdv1A0A075B657 112 aa11.11□□□□□ -0.63
Rnf4-207ENSMUST00000182709 SbpP15501 199 aa11.11□□□□□ -0.63
Rnf4-207ENSMUST00000182709 Cacng7P62956 275 aa11.11□□□□□ -0.63
Rnf4-207ENSMUST00000182709 Defb26Q30KN7 186 aa11.11□□□□□ -0.63
Rnf4-207ENSMUST00000182709 Tppp3Q9CRB6 176 aaKnown RBP11.11□□□□□ -0.63
Rnf4-207ENSMUST00000182709 Cxcl14Q9WUQ5 99 aa11.11□□□□□ -0.63
Rnf4-207ENSMUST00000182709 Gm26920S4R2A5 56 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 49.3 ms