RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Znrd1Q791N7 123 aa12.51□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Nlrc5C3VPR6 1915 aa12.51□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Pglyrp4Q0VB07 374 aa12.51□□□□□ -0.41
Clcn3-203ENSMUST00000093490 MgamB5THE2 1827 aa12.5□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Ighv3-8A0A075B5T0 131 aa12.5□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Ccl24Q9JKC0 119 aa12.5□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Pip4p1Q3TWL2 284 aa12.5□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Fam110dQ80X91 271 aa12.5□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Cacna1iE9Q7P2 2199 aa12.5□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Trav14d-1A0A075B6B1 121 aa12.5□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Tcf24V9GWT9 166 aa12.5□□□□□ -0.41
Clcn3-203ENSMUST00000093490 ApomQ9Z1R3 190 aa12.5□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Igkv1-99F6XWB2 120 aa12.49□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Vmo1Q5SXG7 201 aa12.49□□□□□ -0.41
Clcn3-203ENSMUST00000093490 LeprotO89013 131 aa12.49□□□□□ -0.41
Clcn3-203ENSMUST00000093490 CrygbP04344 175 aa12.49□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Leap2Q91V13 76 aa12.49□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Rspo3Q2TJ95 277 aa12.48□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Dph3Q8K0W9 82 aa12.48□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Tmem14cQ9CQN6 114 aa12.48□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Anapc1P53995 1944 aaKnown RBP12.48□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Ighv1-62-2A0A0A6YXZ4 119 aa12.48□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Zmat4Q8BZ94 229 aa12.48□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Plxnb1Q8CJH3 2119 aa12.48□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Cfap46E9Q2C0 2641 aa12.48□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Ncor1Q60974 2453 aa12.48□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Med13Q5SWW4 2171 aa12.48□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Lyrm9Q3UN90 78 aa12.48□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Gm26558Q8BLW8 286 aa12.48□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Ube2e2Q91W82 201 aa12.48□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Gm11733Q8BQP1 125 aa12.48□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Socs3O35718 225 aa12.48□□□□□ -0.41
Clcn3-203ENSMUST00000093490 P01786 117 aa12.48□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Frem1Q684R7 2191 aa12.48□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Snrnp200Q6P4T2 2136 aaKnown RBP12.47□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Col24a1Q30D77 1733 aa12.47□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Foxi1Q922I5 372 aa12.47□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Tnfrsf13bQ9ET35 249 aa12.47□□□□□ -0.41
Clcn3-203ENSMUST00000093490 MylkQ6PDN3 1941 aaKnown RBP12.47□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Zc2hc1aQ8BJH1 324 aa12.47□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Dnajc13D4AFX7 2248 aaKnown RBP12.46□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Lamtor3O88653 124 aa12.46□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Edn1P22387 202 aa12.46□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Ifitm1Q9D103 106 aa12.46□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Ros1Q78DX7 2340 aa12.46□□□□□ -0.41
Clcn3-203ENSMUST00000093490 ColqO35348 457 aa12.46□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Rnf183Q8QZS5 190 aa12.46□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Dmrtc1c1Q9D410 238 aa12.46□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Fam216aQ9DB54 251 aa12.46□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Gm6034E9Q101 117 aa12.46□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Gm19684G3UZ45 117 aa12.46□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Gm7102J3QQ10 178 aa12.46□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Dad1P61804 113 aa12.46□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Tmem210Q9D2F0 147 aa12.46□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Fhl3Q9R059 289 aa12.46□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Vwc2lQ505H4 222 aa12.45□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Plxnb3Q9QY40 1902 aa12.45□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Smim10l1A0A087WNQ7 89 aa12.45□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Atp6v0bQ91V37 205 aa12.45□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Igkv4-53A0A0G2JFC6 119 aa12.45□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Zfp407G3UVV3 2246 aa12.45□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Trav6n-6A0A075B6B2 114 aa12.45□□□□□ -0.42
Clcn3-203ENSMUST00000093490 CtsgP28293 261 aa12.45□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Mapk1ip1lQ8BH93 242 aa12.45□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Cacna1gQ5SUF7 2381 aa12.45□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Trav3-4A0A075B654 114 aa12.45□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Tcl1b4P56844 120 aa12.45□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Cysrt1Q9D1E4 142 aa12.45□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Gm21994F6T2D2 329 aa12.44□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Igll1P20764 209 aa12.44□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Sdhaf1Q3U276 118 aa12.44□□□□□ -0.42
Clcn3-203ENSMUST00000093490 P04940 107 aa12.44□□□□□ -0.42
Clcn3-203ENSMUST00000093490 P04941 107 aa12.44□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Igkv3-1A0A075B5P1 119 aa12.44□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Igkv8-24A0A140T8P5 121 aa12.44□□□□□ -0.42
Clcn3-203ENSMUST00000093490 A530064D06RikQ8BNV8 229 aa12.44□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Rasl10aQ8K5A4 203 aa12.44□□□□□ -0.42
Clcn3-203ENSMUST00000093490 PpbpQ9EQI5 113 aa12.44□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Ighv1-4A0A075B5T4 117 aa12.43□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Cd99Q8VCN6 175 aa12.43□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Trav6-6A0A075B603 114 aa12.43□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Gm9961Q8BNV2 113 aa12.43□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Igkv4-62A0A0G2JDW9 117 aa12.43□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Shisa9Q9CZN4 424 aa12.43□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Lyg1Q9D7Q0 197 aa12.43□□□□□ -0.42
Clcn3-203ENSMUST00000093490 GfyJ3KML8 504 aa12.43□□□□□ -0.42
Clcn3-203ENSMUST00000093490 E030018B13RikJ3QMS9 113 aa12.43□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Ccl25O35903 144 aa12.43□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Ighv1-74A0A0G2JGK2 117 aa12.42□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Gm20499D3Z4G5 72 aa12.42□□□□□ -0.42
Clcn3-203ENSMUST00000093490 P01793 123 aa12.42□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Mustn1Q99JI1 82 aa12.42□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Gm10638F6QEG2 257 aa12.42□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Q08AU9 97 aa12.42□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Lage3Q9CR70 148 aa12.42□□□□□ -0.42
Clcn3-203ENSMUST00000093490 A230072I06RikQ3UUJ8 172 aa12.42□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Lrrk1Q3UHC2 2014 aa12.42□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Nxph4G3X9N5 304 aa12.42□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Gata3P23772 443 aa12.42□□□□□ -0.42
Clcn3-203ENSMUST00000093490 Trav12d-3A0A075B6A4 115 aa12.41□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 59.8 ms