RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Ighv1-16A0A075B5U1 98 aa9.65□□□□□ -0.86
Trim56-201ENSMUST00000054384 Gm4744D3Z3S5 154 aa9.65□□□□□ -0.86
Trim56-201ENSMUST00000054384 Ca5aP23589 299 aa9.65□□□□□ -0.86
Trim56-201ENSMUST00000054384 Arhgap32Q811P8 2089 aa9.65□□□□□ -0.86
Trim56-201ENSMUST00000054384 Sigmar1O55242 223 aa9.65□□□□□ -0.87
Trim56-201ENSMUST00000054384 SostQ99P68 211 aa9.65□□□□□ -0.87
Trim56-201ENSMUST00000054384 RtbdnQ8QZY4 247 aa9.65□□□□□ -0.87
Trim56-201ENSMUST00000054384 Pear1Q8VIK5 1034 aa9.65□□□□□ -0.87
Trim56-201ENSMUST00000054384 Mtatp8P03930 67 aa9.64□□□□□ -0.87
Trim56-201ENSMUST00000054384 March3Q8BRX9 218 aa9.64□□□□□ -0.87
Trim56-201ENSMUST00000054384 Mrpl52Q9D0Y8 121 aa9.64□□□□□ -0.87
Trim56-201ENSMUST00000054384 Gm9513B3GLJ6 99 aa9.64□□□□□ -0.87
Trim56-201ENSMUST00000054384 NrtnP97463 195 aa9.64□□□□□ -0.87
Trim56-201ENSMUST00000054384 Gata1P17679 413 aa9.64□□□□□ -0.87
Trim56-201ENSMUST00000054384 Cdkn2aQ64364 169 aa9.64□□□□□ -0.87
Trim56-201ENSMUST00000054384 OtosQ8R448 89 aa9.64□□□□□ -0.87
Trim56-201ENSMUST00000054384 Igkv4-57A0A0A6YYE7 117 aa9.64□□□□□ -0.87
Trim56-201ENSMUST00000054384 Cd33Q63994 403 aa9.64□□□□□ -0.87
Trim56-201ENSMUST00000054384 Tmem30bQ8BHG3 353 aa9.64□□□□□ -0.87
Trim56-201ENSMUST00000054384 Gm15294V9GXA7 121 aa9.63□□□□□ -0.87
Trim56-201ENSMUST00000054384 Ang2Q64438 145 aa9.63□□□□□ -0.87
Trim56-201ENSMUST00000054384 EpopQ7TNS8 369 aa9.63□□□□□ -0.87
Trim56-201ENSMUST00000054384 Igkv19-93A0A0G2JFZ3 115 aa9.63□□□□□ -0.87
Trim56-201ENSMUST00000054384 Gm33815A0A087WNV3 176 aa9.63□□□□□ -0.87
Trim56-201ENSMUST00000054384 A0A1Y7VLU2 103 aa9.63□□□□□ -0.87
Trim56-201ENSMUST00000054384 P01787 123 aa9.63□□□□□ -0.87
Trim56-201ENSMUST00000054384 Srsf2Q62093 221 aaKnown RBP9.63□□□□□ -0.87
Trim56-201ENSMUST00000054384 C2cd3Q52KB6 2323 aa9.63□□□□□ -0.87
Trim56-201ENSMUST00000054384 Igkv6-13A0A0G2JGY3 119 aa9.62□□□□□ -0.87
Trim56-201ENSMUST00000054384 Gm12169F2Z474 250 aa9.62□□□□□ -0.87
Trim56-201ENSMUST00000054384 Gm20726G3UX18 150 aa9.62□□□□□ -0.87
Trim56-201ENSMUST00000054384 P01788 123 aa9.62□□□□□ -0.87
Trim56-201ENSMUST00000054384 Rpp25lQ99JH1 163 aa9.62□□□□□ -0.87
Trim56-201ENSMUST00000054384 C330021F23RikQ8C7T0 141 aa9.62□□□□□ -0.87
Trim56-201ENSMUST00000054384 Atp6v0e1Q9CQD8 81 aa9.62□□□□□ -0.87
Trim56-201ENSMUST00000054384 Stpg1Q9D2F5 341 aa9.62□□□□□ -0.87
Trim56-201ENSMUST00000054384 Slc25a47Q6IS41 310 aa9.62□□□□□ -0.87
Trim56-201ENSMUST00000054384 Atp23Q9CWQ3 201 aa9.62□□□□□ -0.87
Trim56-201ENSMUST00000054384 Morn5Q9DAI9 170 aa9.62□□□□□ -0.87
Trim56-201ENSMUST00000054384 Pmaip1Q9JM54 103 aa9.62□□□□□ -0.87
Trim56-201ENSMUST00000054384 Gm5294J3QP53 216 aa9.62□□□□□ -0.87
Trim56-201ENSMUST00000054384 Gm43517E9PYS1 339 aa9.61□□□□□ -0.87
Trim56-201ENSMUST00000054384 P0C1Z5 52 aa9.61□□□□□ -0.87
Trim56-201ENSMUST00000054384 Gm815Q3UWS2 115 aa9.61□□□□□ -0.87
Trim56-201ENSMUST00000054384 Csrp1P97315 193 aaKnown RBP9.61□□□□□ -0.87
Trim56-201ENSMUST00000054384 Q91WE4 72 aa9.61□□□□□ -0.87
Trim56-201ENSMUST00000054384 Sp5Q9JHX2 398 aa9.61□□□□□ -0.87
Trim56-201ENSMUST00000054384 Gm44973A0A140LJJ1 189 aa9.61□□□□□ -0.87
Trim56-201ENSMUST00000054384 KprpB2RUR4 657 aa9.61□□□□□ -0.87
Trim56-201ENSMUST00000054384 Tmem52Q9D702 196 aa9.61□□□□□ -0.87
Trim56-201ENSMUST00000054384 Sorl1O88307 2215 aaKnown RBP9.61□□□□□ -0.87
Trim56-201ENSMUST00000054384 Trav14n-2A0A0G2JDF5 121 aa9.61□□□□□ -0.87
Trim56-201ENSMUST00000054384 Trav9d-4A0A0G2JG37 103 aa9.61□□□□□ -0.87
Trim56-201ENSMUST00000054384 Cox6a1P43024 111 aa9.61□□□□□ -0.87
Trim56-201ENSMUST00000054384 Ighv1-55A0A075B5W6 117 aa9.6□□□□□ -0.87
Trim56-201ENSMUST00000054384 Gm20379A0A087WR34 119 aa9.6□□□□□ -0.87
Trim56-201ENSMUST00000054384 Rbm3O89086 153 aaKnown RBP9.6□□□□□ -0.87
Trim56-201ENSMUST00000054384 Dand5Q76LW6 185 aa9.6□□□□□ -0.87
Trim56-201ENSMUST00000054384 Pcnx3Q8VI59 2028 aa9.6□□□□□ -0.87
Trim56-201ENSMUST00000054384 1700084M14RikB1AT01 78 aa9.6□□□□□ -0.87
Trim56-201ENSMUST00000054384 P03980 138 aa9.6□□□□□ -0.87
Trim56-201ENSMUST00000054384 Trav4n-4A0A075B615 110 aa9.6□□□□□ -0.87
Trim56-201ENSMUST00000054384 Runx1Q03347 451 aa9.6□□□□□ -0.87
Trim56-201ENSMUST00000054384 Tal2Q62282 108 aa9.6□□□□□ -0.87
Trim56-201ENSMUST00000054384 Zcwpw2Q08EN7 125 aa9.6□□□□□ -0.87
Trim56-201ENSMUST00000054384 Minos1Q7TNS2 76 aa9.6□□□□□ -0.87
Trim56-201ENSMUST00000054384 Fam24aQ8CF27 98 aa9.6□□□□□ -0.87
Trim56-201ENSMUST00000054384 Gm27027S4R1M6 97 aa9.6□□□□□ -0.87
Trim56-201ENSMUST00000054384 Zfp951A0A087WRH0 451 aa9.59□□□□□ -0.87
Trim56-201ENSMUST00000054384 Bex1Q9R224 128 aa9.59□□□□□ -0.87
Trim56-201ENSMUST00000054384 Ighv5-9-1A0A0A6YVS4 126 aa9.59□□□□□ -0.87
Trim56-201ENSMUST00000054384 Tmem243B2RVB9 118 aa9.59□□□□□ -0.87
Trim56-201ENSMUST00000054384 Ypel3P61237 119 aa9.59□□□□□ -0.87
Trim56-201ENSMUST00000054384 P04946 108 aa9.59□□□□□ -0.87
Trim56-201ENSMUST00000054384 Spink12Q9D256 87 aa9.59□□□□□ -0.87
Trim56-201ENSMUST00000054384 Ighv3-4A0A0A6YXF1 117 aa9.59□□□□□ -0.87
Trim56-201ENSMUST00000054384 Spink8Q09TK9 105 aa9.59□□□□□ -0.87
Trim56-201ENSMUST00000054384 9430097D07RikQ8BS47 195 aa9.59□□□□□ -0.87
Trim56-201ENSMUST00000054384 Fgf4P11403 202 aa9.59□□□□□ -0.87
Trim56-201ENSMUST00000054384 PtprsB0V2N1 1907 aa9.59□□□□□ -0.87
Trim56-201ENSMUST00000054384 Trav14-2A0A075B694 121 aa9.58□□□□□ -0.88
Trim56-201ENSMUST00000054384 Ighv1-23A0A0A6YVW3 117 aa9.58□□□□□ -0.88
Trim56-201ENSMUST00000054384 Defb26Q30KN7 186 aa9.58□□□□□ -0.88
Trim56-201ENSMUST00000054384 Msrb3Q8BU85 253 aa9.58□□□□□ -0.88
Trim56-201ENSMUST00000054384 DscamQ9ERC8 2013 aa9.58□□□□□ -0.88
Trim56-201ENSMUST00000054384 Ighv8-4A0A0A6YW26 117 aa9.58□□□□□ -0.88
Trim56-201ENSMUST00000054384 B1ARW8 110 aa9.58□□□□□ -0.88
Trim56-201ENSMUST00000054384 Sdhaf1Q3U276 118 aa9.58□□□□□ -0.88
Trim56-201ENSMUST00000054384 Pygo2Q80V76 405 aa9.58□□□□□ -0.88
Trim56-201ENSMUST00000054384 Gm26558Q8BLW8 286 aa9.58□□□□□ -0.88
Trim56-201ENSMUST00000054384 4930546C10RikE9Q4Y3 121 aa9.58□□□□□ -0.88
Trim56-201ENSMUST00000054384 Synj2bpQ9D6K5 145 aa9.58□□□□□ -0.88
Trim56-201ENSMUST00000054384 Smim10l1A0A087WNQ7 89 aa9.58□□□□□ -0.88
Trim56-201ENSMUST00000054384 Pla2g5P97391 137 aa9.58□□□□□ -0.88
Trim56-201ENSMUST00000054384 Znrd1Q791N7 123 aa9.58□□□□□ -0.88
Trim56-201ENSMUST00000054384 Fxyd1Q9Z239 92 aa9.57□□□□□ -0.88
Trim56-201ENSMUST00000054384 Luzp4B1AV09 449 aa9.57□□□□□ -0.88
Trim56-201ENSMUST00000054384 Gm15127B1AVZ5 449 aa9.57□□□□□ -0.88
Trim56-201ENSMUST00000054384 Gm15107B1B0X0 449 aa9.57□□□□□ -0.88
Trim56-201ENSMUST00000054384 Gm15085Q62012 449 aa9.57□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 81.3 ms