RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Dtx1Q61010 627 aa11.43□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Hspe1Q64433 102 aaKnown RBP11.43□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Obox8V9GWY9 217 aa11.43□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Cacna1aP97445 2368 aa11.43□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Cks1brtQ3UNC9 96 aa11.43□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Uqcrfs1Q9CR68 274 aa11.43□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 D930048N14RikA2AA67 225 aa11.42□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 YrdcQ3U5F4 280 aa11.42□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 GlrxQ9QUH0 107 aa11.42□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 RelnQ60841 3461 aa11.42□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Gm6525A0A0A6YW33 106 aa11.41□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Gm21370Q3T9V6 190 aa11.41□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Klk13Q8CGR6 276 aa11.41□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 RpeQ8VEE0 228 aa11.41□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Pgpep1Q9ESW8 209 aa11.41□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Ccl6P27784 116 aa11.41□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Gm5941Q497P9 117 aa11.41□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Cd52Q64389 74 aa11.41□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Mustn1Q99JI1 82 aa11.41□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 MrapQ9D159 127 aa11.41□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Arpc1aQ9R0Q6 370 aa11.41□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Rs1Q9Z1L4 224 aa11.41□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Ros1Q78DX7 2340 aa11.41□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Ighv1-77A0A0G2JGS9 117 aa11.4□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Gm45753A0A1C7CYU8 86 aa11.4□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Gm5294J3QP53 216 aa11.4□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 P18527 97 aa11.4□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Map6d1Q14BB9 191 aa11.4□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Mrpl16Q99N93 251 aa11.4□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Ighv1-81A0A075B5Y4 117 aa11.4□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Gm45717A0A1B0GT68 152 aa11.4□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 PolP10400 120 aa11.4□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Tln2Q71LX4 2375 aa11.39□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Gm44965A0A0N4SVR3 59 aa11.39□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Brd3osA0A1B0GRB6 84 aa11.39□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Tmem95P0DJF3 176 aa11.39□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 NdpP48744 131 aa11.39□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 NrepQ07475 68 aa11.39□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Gm10192Q3V0S1 108 aa11.39□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Abca1P41233 2261 aa11.39□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Defb45Q3V490 66 aa11.39□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Gm10277Q6R5C6 214 aa11.39□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Akap9Q70FJ1 3797 aa11.39□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Pcnx1Q9QYC1 2344 aa11.39□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Gm45785A0A1B0GT05 94 aa11.38□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 P18532 116 aa11.38□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Cdip1Q9DB75 208 aa11.38□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Spta1P08032 2415 aa11.38□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Umad1E0CX23 159 aa11.38□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 P01837 106 aa11.38□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 AW146154Q3TPQ7 468 aa11.38□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Khdc1cQ4KL78 166 aa11.38□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Samd10Q7TST3 202 aa11.38□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Atp6v0e2Q91XE7 81 aa11.38□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Wisp2Q9Z0G4 251 aa11.38□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 AcanQ61282 2132 aaKnown RBP11.38□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Runx1Q03347 451 aa11.37□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Cdx4Q07424 282 aa11.37□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Olfr312Q7TRZ9 308 aa11.37□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Klk5Q9D140 293 aa11.37□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Igkv4-81A0A0G2JEY5 119 aa11.37□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 CntfrO88507 372 aa11.37□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Prok1Q14A28 105 aa11.37□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Gm6040Q4QY32 63 aa11.37□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 9130230L23RikQ8CC80 163 aa11.37□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Anapc13Q8R034 74 aa11.37□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Plac1Q9JI83 173 aa11.37□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Fam240aJ3QNP9 97 aa11.36□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Csn3P06796 181 aa11.36□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Gm4763Q8CFJ5 196 aa11.36□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Lypd8Q9D7S0 255 aa11.36□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Nit2Q9JHW2 276 aa11.36□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 BokO35425 213 aa11.36□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 CrygbP04344 175 aa11.36□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Gm10295Q8CCF3 114 aa11.36□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Pradc1Q9D9N8 188 aa11.36□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Defa-rs2P17534 91 aa11.35□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 LoxP28301 411 aa11.35□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Klhdc1Q80YG3 406 aa11.35□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Gm16223Q8CBM3 117 aa11.35□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Bub3Q9WVA3 326 aa11.35□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 BptfA2A654 3036 aaKnown RBP11.35□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Dmxl2Q8BPN8 3032 aa11.35□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Trav21-dv12A0A075B6C4 109 aa11.35□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Cfc1P97766 202 aa11.35□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Ovol2Q8CIV7 274 aa11.35□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Q9CQM1 111 aa11.35□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Ormdl2Q9CQZ0 153 aa11.35□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 RhohQ9D3G9 191 aa11.35□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 HilpdaQ9JLS0 64 aa11.35□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Ndufa4Q62425 82 aaKnown RBP11.34□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Srsf9Q9D0B0 222 aaKnown RBP11.34□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Tspan13Q9D8C2 204 aa11.34□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Ighv1-4A0A075B5T4 117 aa11.34□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 MdfiP70331 251 aa11.34□□□□□ -0.59
Ushbp1-201ENSMUST00000049184 Gm5878E9PUB3 99 aa11.33□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Ube2d1P61080 147 aaKnown RBP11.33□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 SvipQ3UZP4 77 aa11.33□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 AtrxQ61687 2476 aaKnown RBP11.33□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Ighv8-5A0A0A6YY60 119 aa11.33□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 89.5 ms