RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 P01739 132 aa6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 P01750 117 aa6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 Pafah1b2Q61206 229 aa6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 TroQ6DIC6 2087 aa6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 CdsnQ7TPC1 561 aa6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 Lypd1Q8BLC3 141 aa6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 Olfr1118A0A0J9YUE7 307 aa6.55□□□□□ -1.36
Trim39-201ENSMUST00000042717 Gm14325A2AW67 498 aa6.55□□□□□ -1.36
Trim39-201ENSMUST00000042717 Znf239P24399 201 aa6.55□□□□□ -1.36
Trim39-201ENSMUST00000042717 CtsgP28293 261 aa6.55□□□□□ -1.36
Trim39-201ENSMUST00000042717 Fhl1P97447 280 aaKnown RBP6.55□□□□□ -1.36
Trim39-201ENSMUST00000042717 Smim15Q3UTD9 74 aa6.55□□□□□ -1.36
Trim39-201ENSMUST00000042717 Olfr317Q5NCD6 327 aa6.55□□□□□ -1.36
Trim39-201ENSMUST00000042717 Notch2O35516 2470 aa6.55□□□□□ -1.36
Trim39-201ENSMUST00000042717 Hivep3A2A884 2348 aa6.55□□□□□ -1.36
Trim39-201ENSMUST00000042717 Ighv1-64A0A075B5X3 117 aa6.55□□□□□ -1.36
Trim39-201ENSMUST00000042717 Adcyap1O70176 175 aa6.55□□□□□ -1.36
Trim39-201ENSMUST00000042717 Olfr1537P34983 314 aa6.55□□□□□ -1.36
Trim39-201ENSMUST00000042717 Olfr745Q7TRL9 328 aa6.55□□□□□ -1.36
Trim39-201ENSMUST00000042717 Gm5868Q8BJG1 145 aa6.55□□□□□ -1.36
Trim39-201ENSMUST00000042717 IqcjQ8BPW0 110 aa6.55□□□□□ -1.36
Trim39-201ENSMUST00000042717 Q8CF25 301 aa6.55□□□□□ -1.36
Trim39-201ENSMUST00000042717 Rasl10aQ8K5A4 203 aa6.55□□□□□ -1.36
Trim39-201ENSMUST00000042717 Olfr1402Q8VET1 320 aa6.55□□□□□ -1.36
Trim39-201ENSMUST00000042717 MNCb-2875Q9DCB3 74 aa6.55□□□□□ -1.36
Trim39-201ENSMUST00000042717 Obox8V9GWY9 217 aa6.55□□□□□ -1.36
Trim39-201ENSMUST00000042717 Trav7n-4A0A075B620 113 aa6.54□□□□□ -1.36
Trim39-201ENSMUST00000042717 Gm29666A0A087WQ99 126 aa6.54□□□□□ -1.36
Trim39-201ENSMUST00000042717 Trbv1A0A0B4J1G7 116 aa6.54□□□□□ -1.36
Trim39-201ENSMUST00000042717 D830044I16RikA0A1D5RM53 117 aa6.54□□□□□ -1.36
Trim39-201ENSMUST00000042717 Krtap24-1G3X9A2 248 aa6.54□□□□□ -1.36
Trim39-201ENSMUST00000042717 Reg3gO09049 174 aa6.54□□□□□ -1.36
Trim39-201ENSMUST00000042717 Sap30O88574 220 aa6.54□□□□□ -1.36
Trim39-201ENSMUST00000042717 Cox6b1P56391 86 aaKnown RBP6.54□□□□□ -1.36
Trim39-201ENSMUST00000042717 Btf3l4Q9CQH7 158 aaKnown RBP6.54□□□□□ -1.36
Trim39-201ENSMUST00000042717 Chchd5Q9CQP3 110 aa6.54□□□□□ -1.36
Trim39-201ENSMUST00000042717 Tex15F8VPN2 2785 aa6.54□□□□□ -1.36
Trim39-201ENSMUST00000042717 Ighv1-82A0A0G2JEU7 117 aa6.54□□□□□ -1.36
Trim39-201ENSMUST00000042717 Gm10130F6ZHM5 101 aa6.54□□□□□ -1.36
Trim39-201ENSMUST00000042717 Snrpd3P62320 126 aaKnown RBP6.54□□□□□ -1.36
Trim39-201ENSMUST00000042717 Stab1Q8R4Y4 2571 aa6.53□□□□□ -1.36
Trim39-201ENSMUST00000042717 9130204L05RikG3UWB8 92 aa6.53□□□□□ -1.36
Trim39-201ENSMUST00000042717 Fhl2O70433 279 aa6.53□□□□□ -1.36
Trim39-201ENSMUST00000042717 CebpgP53568 150 aa6.53□□□□□ -1.36
Trim39-201ENSMUST00000042717 Smim7Q5RKS2 75 aa6.53□□□□□ -1.36
Trim39-201ENSMUST00000042717 Odf1Q61999 247 aa6.53□□□□□ -1.36
Trim39-201ENSMUST00000042717 QrfpQ8CE23 124 aa6.53□□□□□ -1.36
Trim39-201ENSMUST00000042717 Olfr1012Q8VFJ7 311 aa6.53□□□□□ -1.36
Trim39-201ENSMUST00000042717 Olfr1404Q8VGE1 313 aa6.53□□□□□ -1.36
Trim39-201ENSMUST00000042717 Olfr954Q9EQB6 314 aa6.53□□□□□ -1.36
Trim39-201ENSMUST00000042717 Ube2l6Q9QZU9 153 aa6.53□□□□□ -1.36
Trim39-201ENSMUST00000042717 Trav16nA0A075B634 117 aa6.53□□□□□ -1.36
Trim39-201ENSMUST00000042717 Psmg4P0C7N9 123 aa6.53□□□□□ -1.36
Trim39-201ENSMUST00000042717 Vmn1r202Q8R259 302 aa6.53□□□□□ -1.36
Trim39-201ENSMUST00000042717 Q9D7E4 109 aa6.53□□□□□ -1.36
Trim39-201ENSMUST00000042717 Rabac1Q9Z0S9 185 aa6.53□□□□□ -1.36
Trim39-201ENSMUST00000042717 Trav14n-3A0A075B645 120 aa6.53□□□□□ -1.36
Trim39-201ENSMUST00000042717 Gm12845A0A0N4SUM5 588 aa6.53□□□□□ -1.36
Trim39-201ENSMUST00000042717 Rbx1P62878 108 aa6.53□□□□□ -1.36
Trim39-201ENSMUST00000042717 Cib3Q0P523 160 aa6.53□□□□□ -1.36
Trim39-201ENSMUST00000042717 Rbfox3Q8BIF2 374 aa6.53□□□□□ -1.36
Trim39-201ENSMUST00000042717 Golt1bQ9CR60 138 aa6.53□□□□□ -1.36
Trim39-201ENSMUST00000042717 Brwd1Q921C3 2304 aa6.52□□□□□ -1.37
Trim39-201ENSMUST00000042717 Ighv1-50A0A075B5W1 117 aa6.52□□□□□ -1.37
Trim39-201ENSMUST00000042717 Ighv2-3A0A075B696 115 aa6.52□□□□□ -1.37
Trim39-201ENSMUST00000042717 Bak1O08734 209 aa6.52□□□□□ -1.37
Trim39-201ENSMUST00000042717 Klk1b4P00757 256 aa6.52□□□□□ -1.37
Trim39-201ENSMUST00000042717 Ins1P01325 108 aa6.52□□□□□ -1.37
Trim39-201ENSMUST00000042717 Fam110dQ80X91 271 aa6.52□□□□□ -1.37
Trim39-201ENSMUST00000042717 Olfr982Q8VGB3 321 aa6.52□□□□□ -1.37
Trim39-201ENSMUST00000042717 Obox1Q9D350 204 aa6.52□□□□□ -1.37
Trim39-201ENSMUST00000042717 Esm1Q9QYY7 184 aa6.52□□□□□ -1.37
Trim39-201ENSMUST00000042717 Gm33815A0A087WNV3 176 aa6.52□□□□□ -1.37
Trim39-201ENSMUST00000042717 Gm29644A0A087WPG2 191 aa6.52□□□□□ -1.37
Trim39-201ENSMUST00000042717 Ighv8-4A0A0A6YW26 117 aa6.52□□□□□ -1.37
Trim39-201ENSMUST00000042717 1810032O08RikE9PZV8 113 aa6.52□□□□□ -1.37
Trim39-201ENSMUST00000042717 Prr3Q811B5 190 aaKnown RBP6.52□□□□□ -1.37
Trim39-201ENSMUST00000042717 Them7Q9DCP4 223 aa6.52□□□□□ -1.37
Trim39-201ENSMUST00000042717 Trav6d-7A0A075B6B0 112 aa6.51□□□□□ -1.37
Trim39-201ENSMUST00000042717 Igkv4-70A0A0B4J1I5 116 aa6.51□□□□□ -1.37
Trim39-201ENSMUST00000042717 Igkv4-69A0A0B4J1I6 116 aa6.51□□□□□ -1.37
Trim39-201ENSMUST00000042717 Gm11027G8JL69 66 aa6.51□□□□□ -1.37
Trim39-201ENSMUST00000042717 MymxQ2Q5T5 84 aa6.51□□□□□ -1.37
Trim39-201ENSMUST00000042717 NpbQ8K4P1 119 aa6.51□□□□□ -1.37
Trim39-201ENSMUST00000042717 Smim10l1A0A087WNQ7 89 aa6.51□□□□□ -1.37
Trim39-201ENSMUST00000042717 1500009C09RikD3YYW9 81 aa6.51□□□□□ -1.37
Trim39-201ENSMUST00000042717 Gm5218F6YH22 154 aa6.51□□□□□ -1.37
Trim39-201ENSMUST00000042717 Tmem256Q5F285 113 aa6.51□□□□□ -1.37
Trim39-201ENSMUST00000042717 Trav3-3Q5R1C3 114 aa6.51□□□□□ -1.37
Trim39-201ENSMUST00000042717 Olfr1419Q7TQS2 343 aa6.51□□□□□ -1.37
Trim39-201ENSMUST00000042717 Tmed6Q9CQG0 239 aa6.51□□□□□ -1.37
Trim39-201ENSMUST00000042717 Q9CR34 168 aa6.51□□□□□ -1.37
Trim39-201ENSMUST00000042717 Olfr1116E9PXB8 307 aa6.51□□□□□ -1.37
Trim39-201ENSMUST00000042717 Gm3443F7CCV5 94 aa6.51□□□□□ -1.37
Trim39-201ENSMUST00000042717 Klf12O35738 402 aa6.51□□□□□ -1.37
Trim39-201ENSMUST00000042717 Thy1P01831 162 aa6.51□□□□□ -1.37
Trim39-201ENSMUST00000042717 F2rl1P55086 399 aa6.51□□□□□ -1.37
Trim39-201ENSMUST00000042717 Pex7P97865 318 aa6.51□□□□□ -1.37
Trim39-201ENSMUST00000042717 Olfr1437Q7TQR7 312 aa6.51□□□□□ -1.37
Trim39-201ENSMUST00000042717 Fn1P11276 2477 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 60.3 ms