RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 ThadaA8C756 1938 aa18.36■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Prdm6Q3UZD5 596 aa18.36■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Gm2174F6ZVF2 133 aa18.36■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Plxna4Q80UG2 1893 aa18.35■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Rpl35aO55142 110 aa18.35■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 P01630 113 aa18.35■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Reg3dQ9QUS9 175 aa18.35■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Prok2Q9QXU7 128 aa18.35■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 B1ARW8 110 aa18.35■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 MplkipQ9D011 178 aa18.35■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Snrnp200Q6P4T2 2136 aaKnown RBP18.35■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Fhl3Q9R059 289 aa18.35■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Dock4P59764 1978 aa18.34■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Igkv6-15A0A140T8M5 115 aa18.34■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Sbf1Q6ZPE2 1867 aa18.34■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Igkv3-2A0A075B5P0 119 aa18.34■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Igkv4-61A0A0G2JH00 117 aa18.34■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Igkv6-13A0A0G2JGY3 119 aa18.34■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 P01791 123 aa18.34■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Pfn2Q9JJV2 140 aa18.33■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Igkv4-59A0A0B4J1I8 117 aa18.33■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 P01786 117 aa18.33■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 ApomQ9Z1R3 190 aa18.33■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 Trav4d-3A0A075B625 110 aa18.33■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 P01738 130 aa18.32■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 Atp6v0e2Q91XE7 81 aa18.32■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 Tmem243B2RVB9 118 aa18.32■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 Atp5eP56382 52 aa18.32■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 Fam24aQ8CF27 98 aa18.31■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 Lgals4Q8K419 326 aa18.31■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 E130218I03RikA0A0U1RNU5 63 aa18.31■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 Gm20481G3UXK4 153 aa18.31■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 Olfr311Q5NC59 308 aa18.3■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 Cacna1iE9Q7P2 2199 aa18.3■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 Gm815Q3UWS2 115 aa18.3■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 Gm6040Q4QY32 63 aa18.3■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 4930415O20RikQ8CDT5 131 aa18.29■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 Ighv1-64A0A075B5X3 117 aa18.29■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 Igkv4-54A0A0G2JES9 117 aa18.29■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 Fhl4Q8CDC8 279 aa18.29■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 Igkv4-81A0A0G2JEY5 119 aa18.28■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 Synj2bpQ9D6K5 145 aa18.28■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 Tanc1Q0VGY8 1856 aa18.28■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 Cd24P24807 76 aa18.28■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 Loxl1P97873 607 aa18.28■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 Ang5Q5GAN1 145 aa18.28■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 Ramp1Q9WTJ5 148 aa18.28■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 ArtnQ9Z0L2 224 aa18.28■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 PtprfA2A8L5 1898 aa18.28■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 Atg2bQ80XK6 2075 aa18.27■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 Trav4-3A0A0B4J1K1 110 aa18.27■□□□□ 0.52
Sh3rf1-201ENSMUST00000034060 Rbmy1bQ60990 380 aa18.27■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Spink10Q8CAC8 162 aa18.27■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Rbm3O89086 153 aaKnown RBP18.26■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Igkv2-137A0A0B4J1H6 120 aa18.26■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Igkv4-72A0A0B4J1I4 117 aa18.26■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Zfp951A0A087WRH0 451 aa18.26■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Dand5Q76LW6 185 aa18.26■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Igkv8-16A0A0G2JDG9 121 aa18.25■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Casp8ap2Q9WUF3 1962 aa18.25■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 P04940 107 aa18.24■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 P04941 107 aa18.24■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Tmem213Q08EA8 116 aa18.24■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Plxna2P70207 1894 aa18.24■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Col4a5Q63ZW6 1691 aa18.24■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Trav9d-4A0A0G2JG37 103 aa18.23■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 P01837 106 aa18.23■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Ndufa12Q7TMF3 145 aaKnown RBP18.23■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Leap2Q91V13 76 aa18.23■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 SelenowP63300 88 aa18.23■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Gm26602M0QWA4 95 aa18.23■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Rmi2Q3UPE3 149 aa18.23■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Gm10295Q8CCF3 114 aa18.23■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Tnfrsf23Q9ER63 176 aa18.23■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Ighv1-74A0A0G2JGK2 117 aa18.22■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Malrd1A2AJX4 2123 aa18.22■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Ntf4Q80VU4 209 aa18.22■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Gm10775Q3V290 127 aa18.22■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Iglc1A0A0G2JE99 106 aa18.21■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 P01843 105 aa18.21■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 LoxP28301 411 aa18.21■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Tmem263Q9DAM7 115 aa18.21■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Ighv1-50A0A075B5W1 117 aa18.21■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Mrps12O35680 139 aa18.21■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Prok1Q14A28 105 aa18.21■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Gm5941Q497P9 117 aa18.21■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Fstl3Q9EQC7 256 aa18.21■□□□□ 0.51
Sh3rf1-201ENSMUST00000034060 Ighv8-4A0A0A6YW26 117 aa18.2■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Ighv1-77A0A0G2JGS9 117 aa18.2■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Q08AU9 97 aa18.2■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 4933414I15RikQ9D4D5 133 aa18.2■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Ighv3-4A0A0A6YXF1 117 aa18.2■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 P01739 132 aa18.2■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 P04942 107 aa18.2■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Tax1bp3Q9DBG9 124 aa18.19■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Igkv4-69A0A0B4J1I6 116 aa18.19■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Dock3Q8CIQ7 2027 aa18.19■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Spink12Q9D256 87 aa18.19■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Crlf1Q9JM58 425 aa18.19■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Gm15294V9GXA7 121 aa18.19■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 885.5 ms