RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 TPRXLQ17RH7 258 aa9.19□□□□□ -0.94
PHGDH-226ENST00000641756 LRP2P98164 4655 aa9.18□□□□□ -0.94
PHGDH-226ENST00000641756 LPAP08519 4548 aa9.17□□□□□ -0.94
PHGDH-226ENST00000641756 UQCR11O14957 56 aa9.16□□□□□ -0.94
PHGDH-226ENST00000641756 MIR22HGQ0VDD5 57 aa9.12□□□□□ -0.95
PHGDH-226ENST00000641756 SPATA8Q6RVD6 105 aa9.12□□□□□ -0.95
PHGDH-226ENST00000641756 HERC2O95714 4834 aa9.05□□□□□ -0.96
PHGDH-226ENST00000641756 A6NN06 94 aa9.05□□□□□ -0.96
PHGDH-226ENST00000641756 J3QL48 77 aa9.05□□□□□ -0.96
PHGDH-226ENST00000641756 KRTAP3-3Q9BYR6 98 aa9.05□□□□□ -0.96
PHGDH-226ENST00000641756 KTN1-AS1Q86SY8 53 aa9.04□□□□□ -0.96
PHGDH-226ENST00000641756 S4R3F8 94 aa9.02□□□□□ -0.96
PHGDH-226ENST00000641756 RBM12B-AS1Q9P1G2 102 aa9.02□□□□□ -0.97
PHGDH-226ENST00000641756 BIRC6Q9NR09 4857 aa9.01□□□□□ -0.97
PHGDH-226ENST00000641756 H3BS24 57 aa9.01□□□□□ -0.97
PHGDH-226ENST00000641756 A0A1B0GU33 70 aa8.98□□□□□ -0.97
PHGDH-226ENST00000641756 H1FX-AS1Q4G0G2 97 aa8.96□□□□□ -0.97
PHGDH-226ENST00000641756 H0YAA0 97 aa8.95□□□□□ -0.98
PHGDH-226ENST00000641756 SEC61BP60468 96 aaKnown RBP8.86□□□□□ -0.99
PHGDH-226ENST00000641756 KRTAP10-6P60371 365 aaPredicted RBP8.86□□□□□ -0.99
PHGDH-226ENST00000641756 KRTAP3-2Q9BYR7 98 aa8.83□□□□□ -1
PHGDH-226ENST00000641756 MUC17Q685J3 4493 aa8.81□□□□□ -1
PHGDH-226ENST00000641756 KRTAP4-1Q9BYQ7 146 aa8.79□□□□□ -1
PHGDH-226ENST00000641756 P0C880 135 aa8.75□□□□□ -1.01
PHGDH-226ENST00000641756 CSAG1Q6PB30 78 aa8.74□□□□□ -1.01
PHGDH-226ENST00000641756 KRTAP13-4Q3LI77 160 aa8.73□□□□□ -1.01
PHGDH-226ENST00000641756 ADM2Q7Z4H4 148 aa8.72□□□□□ -1.01
PHGDH-226ENST00000641756 PRAC1Q96KF2 57 aa8.65□□□□□ -1.03
PHGDH-226ENST00000641756 A0A0D9SG42 100 aa8.64□□□□□ -1.03
PHGDH-226ENST00000641756 PCLOQ9Y6V0 5065 aa8.63□□□□□ -1.03
PHGDH-226ENST00000641756 HERC1Q15751 4861 aa8.61□□□□□ -1.03
PHGDH-226ENST00000641756 K7ERS5 55 aa8.56□□□□□ -1.04
PHGDH-226ENST00000641756 KRTAP19-2Q3LHN2 52 aa8.56□□□□□ -1.04
PHGDH-226ENST00000641756 HMCN2Q8NDA2 5059 aa8.53□□□□□ -1.04
PHGDH-226ENST00000641756 MUC2Q02817 5179 aa8.52□□□□□ -1.05
PHGDH-226ENST00000641756 LINC01554Q52M75 96 aa8.45□□□□□ -1.06
PHGDH-226ENST00000641756 M0QZ58 72 aa8.44□□□□□ -1.06
PHGDH-226ENST00000641756 KRTAP12-2P59991 146 aa8.41□□□□□ -1.06
PHGDH-226ENST00000641756 SPINT4Q6UDR6 99 aa8.38□□□□□ -1.07
PHGDH-226ENST00000641756 KRTAP12-1P59990 96 aa8.36□□□□□ -1.07
PHGDH-226ENST00000641756 LORP23490 312 aaPredicted RBP8.36□□□□□ -1.07
PHGDH-226ENST00000641756 R4GN34 69 aa8.35□□□□□ -1.07
PHGDH-226ENST00000641756 ROMO1P60602 79 aa8.33□□□□□ -1.08
PHGDH-226ENST00000641756 FLGP20930 4061 aaPredicted RBP8.32□□□□□ -1.08
PHGDH-226ENST00000641756 CRIPTQ9P021 101 aa8.29□□□□□ -1.08
PHGDH-226ENST00000641756 KRTAP25-1Q3LHN0 102 aa8.23□□□□□ -1.09
PHGDH-226ENST00000641756 A0A0A0MQY5 61 aa8.22□□□□□ -1.09
PHGDH-226ENST00000641756 LCE2CQ5TA81 110 aa8.2□□□□□ -1.1
PHGDH-226ENST00000641756 FAT4Q6V0I7 4981 aa8.16□□□□□ -1.1
PHGDH-226ENST00000641756 UBR4Q5T4S7 5183 aa8.14□□□□□ -1.11
PHGDH-226ENST00000641756 RNF213Q63HN8 5207 aa8.12□□□□□ -1.11
PHGDH-226ENST00000641756 C10orf95Q9H7T3 257 aa8.05□□□□□ -1.12
PHGDH-226ENST00000641756 M0R2T5 61 aa8□□□□□ -1.13
PHGDH-226ENST00000641756 MT1HP80294 61 aa8□□□□□ -1.13
PHGDH-226ENST00000641756 CAMK2N1Q7Z7J9 78 aa7.88□□□□□ -1.15
PHGDH-226ENST00000641756 MT2AP02795 61 aa7.79□□□□□ -1.16
PHGDH-226ENST00000641756 MT1FP04733 61 aa7.78□□□□□ -1.16
PHGDH-226ENST00000641756 KRTAP19-1Q8IUB9 90 aa7.78□□□□□ -1.16
PHGDH-226ENST00000641756 SPRR2GQ9BYE4 73 aa7.78□□□□□ -1.16
PHGDH-226ENST00000641756 KRTAP10-10P60014 251 aa7.76□□□□□ -1.17
PHGDH-226ENST00000641756 KRTAP9-8Q9BYQ0 159 aa7.76□□□□□ -1.17
PHGDH-226ENST00000641756 PLAC4Q8WY50 150 aa7.65□□□□□ -1.18
PHGDH-226ENST00000641756 TNP1P09430 55 aa7.53□□□□□ -1.2
PHGDH-226ENST00000641756 KRTAP19-8Q3LI54 63 aa7.5□□□□□ -1.21
PHGDH-226ENST00000641756 PP632Q6XCG6 107 aa7.47□□□□□ -1.21
PHGDH-226ENST00000641756 KRTAP9-3Q9BYQ3 159 aa7.45□□□□□ -1.22
PHGDH-226ENST00000641756 MT1BP07438 61 aa7.44□□□□□ -1.22
PHGDH-226ENST00000641756 KRTAP15-1Q3LI76 137 aa7.43□□□□□ -1.22
PHGDH-226ENST00000641756 LCE2AQ5TA79 106 aaPredicted RBP7.34□□□□□ -1.23
PHGDH-226ENST00000641756 LUZP6Q538Z0 58 aa7.31□□□□□ -1.24
PHGDH-226ENST00000641756 KRTAP23-1A1A580 65 aa7.3□□□□□ -1.24
PHGDH-226ENST00000641756 NDUFAF8A1L188 74 aa7.3□□□□□ -1.24
PHGDH-226ENST00000641756 KRTAP10-5P60370 271 aa7.3□□□□□ -1.24
PHGDH-226ENST00000641756 MT1XP80297 61 aa7.3□□□□□ -1.24
PHGDH-226ENST00000641756 LCE2BO14633 110 aa7.22□□□□□ -1.25
PHGDH-226ENST00000641756 LCE3AQ5TA76 89 aa7.21□□□□□ -1.25
PHGDH-226ENST00000641756 KRTAP10-7P60409 375 aaPredicted RBP7.08□□□□□ -1.28
PHGDH-226ENST00000641756 PRO2289Q9P1D8 64 aa7.07□□□□□ -1.28
PHGDH-226ENST00000641756 USH2AO75445 5202 aa7.06□□□□□ -1.28
PHGDH-226ENST00000641756 KRTAP10-12P60413 245 aa7.04□□□□□ -1.28
PHGDH-226ENST00000641756 KRTAP8-1Q8IUC2 63 aa6.99□□□□□ -1.29
PHGDH-226ENST00000641756 KRTAP12-3P60328 96 aa6.86□□□□□ -1.31
PHGDH-226ENST00000641756 SPRR5A0A1B0GTR4 108 aa6.83□□□□□ -1.32
PHGDH-226ENST00000641756 KMT2DO14686 5537 aa6.77□□□□□ -1.33
PHGDH-226ENST00000641756 KRTAP4-8A0A0G2JLE6 195 aa6.73□□□□□ -1.33
PHGDH-226ENST00000641756 KRTAP4-8Q9BYQ9 185 aa6.73□□□□□ -1.33
PHGDH-226ENST00000641756 KRTAP19-5Q3LI72 72 aa6.72□□□□□ -1.33
PHGDH-226ENST00000641756 SSPOA2VEC9 5147 aa6.7□□□□□ -1.34
PHGDH-226ENST00000641756 FSIP2Q5CZC0 6907 aa6.59□□□□□ -1.35
PHGDH-226ENST00000641756 KRTAP19-6Q3LI70 58 aa6.58□□□□□ -1.36
PHGDH-226ENST00000641756 KRTAP19-7Q3SYF9 63 aa6.5□□□□□ -1.37
PHGDH-226ENST00000641756 LCE3CQ5T5A8 94 aa6.44□□□□□ -1.38
PHGDH-226ENST00000641756 LCE2DQ5TA82 110 aaPredicted RBP6.43□□□□□ -1.38
PHGDH-226ENST00000641756 MT1EP04732 61 aa6.35□□□□□ -1.39
PHGDH-226ENST00000641756 FCGBPQ9Y6R7 5405 aaPredicted RBP6.3□□□□□ -1.4
PHGDH-226ENST00000641756 MT1LQ93083 61 aa6.29□□□□□ -1.4
PHGDH-226ENST00000641756 KRTAP4-7Q9BYR0 210 aa6.29□□□□□ -1.4
PHGDH-226ENST00000641756 KRTAP9-6A8MVA2 160 aa6.19□□□□□ -1.42
PHGDH-226ENST00000641756 KRTAP9-2Q9BYQ4 174 aa6.14□□□□□ -1.43
PHGDH-226ENST00000641756 KRTAP19-4Q3LI73 84 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 157.9 ms