RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 SPTSSBQ8NFR3 76 aa6.37□□□□□ -1.39
PHGDH-220ENST00000641570 H7BZZ5 65 aa6.36□□□□□ -1.39
PHGDH-220ENST00000641570 KRTAP3-1Q9BYR8 98 aa6.36□□□□□ -1.39
PHGDH-220ENST00000641570 ATP5EP56381 51 aaPredicted RBP6.35□□□□□ -1.39
PHGDH-220ENST00000641570 CSAG1Q6PB30 78 aa6.35□□□□□ -1.39
PHGDH-220ENST00000641570 LCA10Q71F78 164 aa6.33□□□□□ -1.4
PHGDH-220ENST00000641570 FLGP20930 4061 aaPredicted RBP6.32□□□□□ -1.4
PHGDH-220ENST00000641570 PCP4P48539 62 aa6.31□□□□□ -1.4
PHGDH-220ENST00000641570 TMEM258P61165 79 aa6.31□□□□□ -1.4
PHGDH-220ENST00000641570 CYSTM1Q9H1C7 97 aa6.3□□□□□ -1.4
PHGDH-220ENST00000641570 LCE2AQ5TA79 106 aaPredicted RBP6.27□□□□□ -1.41
PHGDH-220ENST00000641570 COA5Q86WW8 74 aa6.25□□□□□ -1.41
PHGDH-220ENST00000641570 KRTAP10-6P60371 365 aaPredicted RBP6.22□□□□□ -1.41
PHGDH-220ENST00000641570 SEC61GP60059 68 aa6.15□□□□□ -1.42
PHGDH-220ENST00000641570 LORP23490 312 aaPredicted RBP6.14□□□□□ -1.43
PHGDH-220ENST00000641570 KRTAP10-10P60014 251 aa6.13□□□□□ -1.43
PHGDH-220ENST00000641570 ADM2Q7Z4H4 148 aa6.1□□□□□ -1.43
PHGDH-220ENST00000641570 SERP1Q9Y6X1 66 aa6.1□□□□□ -1.43
PHGDH-220ENST00000641570 H0YAA0 97 aa6.09□□□□□ -1.43
PHGDH-220ENST00000641570 KRTAP9-2Q9BYQ4 174 aa6.09□□□□□ -1.43
PHGDH-220ENST00000641570 MT2AP02795 61 aa6.06□□□□□ -1.44
PHGDH-220ENST00000641570 KRTAP9-8Q9BYQ0 159 aa6.04□□□□□ -1.44
PHGDH-220ENST00000641570 PRR15LQ9BU68 103 aa6.03□□□□□ -1.44
PHGDH-220ENST00000641570 MT1FP04733 61 aa6.01□□□□□ -1.45
PHGDH-220ENST00000641570 CRIPTQ9P021 101 aa6.01□□□□□ -1.45
PHGDH-220ENST00000641570 A0A1B0GU69 56 aa6□□□□□ -1.45
PHGDH-220ENST00000641570 R4GN34 69 aa5.98□□□□□ -1.45
PHGDH-220ENST00000641570 V9GYY9 64 aa5.96□□□□□ -1.46
PHGDH-220ENST00000641570 M0QZ58 72 aa5.92□□□□□ -1.46
PHGDH-220ENST00000641570 P0C880 135 aa5.92□□□□□ -1.46
PHGDH-220ENST00000641570 KRTAP9-6A0A140TA67 174 aa5.91□□□□□ -1.46
PHGDH-220ENST00000641570 SMIM26A0A096LP01 95 aa5.9□□□□□ -1.46
PHGDH-220ENST00000641570 RPS28P62857 69 aaKnown RBP5.89□□□□□ -1.47
PHGDH-220ENST00000641570 LINC01558Q9Y6Z2 57 aa5.89□□□□□ -1.47
PHGDH-220ENST00000641570 A0A1B0GU33 70 aa5.86□□□□□ -1.47
PHGDH-220ENST00000641570 LINC01554Q52M75 96 aa5.85□□□□□ -1.47
PHGDH-220ENST00000641570 KRTAP9-3Q9BYQ3 159 aa5.85□□□□□ -1.47
PHGDH-220ENST00000641570 Q5VV11 94 aa5.81□□□□□ -1.48
PHGDH-220ENST00000641570 SPRR2GQ9BYE4 73 aa5.81□□□□□ -1.48
PHGDH-220ENST00000641570 Q1T7F1 81 aa5.8□□□□□ -1.48
PHGDH-220ENST00000641570 PSPHP1O15172 72 aa5.77□□□□□ -1.49
PHGDH-220ENST00000641570 CRCT1Q9UGL9 99 aa5.77□□□□□ -1.49
PHGDH-220ENST00000641570 PLAC4Q8WY50 150 aa5.76□□□□□ -1.49
PHGDH-220ENST00000641570 UQCR11O14957 56 aa5.75□□□□□ -1.49
PHGDH-220ENST00000641570 KRTAP19-1Q8IUB9 90 aa5.75□□□□□ -1.49
PHGDH-220ENST00000641570 A0A0D9SG42 100 aa5.72□□□□□ -1.49
PHGDH-220ENST00000641570 SPATA8Q6RVD6 105 aa5.72□□□□□ -1.49
PHGDH-220ENST00000641570 KRTAP19-8Q3LI54 63 aa5.68□□□□□ -1.5
PHGDH-220ENST00000641570 FSIP2Q5CZC0 6907 aa5.68□□□□□ -1.5
PHGDH-220ENST00000641570 A6NED7 52 aa5.67□□□□□ -1.5
PHGDH-220ENST00000641570 KRTAP13-4Q3LI77 160 aa5.66□□□□□ -1.5
PHGDH-220ENST00000641570 MIR22HGQ0VDD5 57 aa5.65□□□□□ -1.5
PHGDH-220ENST00000641570 LOC100996750A0A140TA64 210 aa5.64□□□□□ -1.51
PHGDH-220ENST00000641570 A6NN06 94 aa5.64□□□□□ -1.51
PHGDH-220ENST00000641570 SPINT4Q6UDR6 99 aa5.64□□□□□ -1.51
PHGDH-220ENST00000641570 KRTAP4-6Q9BYQ5 205 aa5.64□□□□□ -1.51
PHGDH-220ENST00000641570 K7ERS5 55 aa5.61□□□□□ -1.51
PHGDH-220ENST00000641570 CAMK2N1Q7Z7J9 78 aa5.61□□□□□ -1.51
PHGDH-220ENST00000641570 PRO2289Q9P1D8 64 aa5.59□□□□□ -1.51
PHGDH-220ENST00000641570 USH2AO75445 5202 aa5.58□□□□□ -1.52
PHGDH-220ENST00000641570 MT1BP07438 61 aa5.58□□□□□ -1.52
PHGDH-220ENST00000641570 A8MU10 97 aa5.57□□□□□ -1.52
PHGDH-220ENST00000641570 KRTAP19-6Q3LI70 58 aa5.5□□□□□ -1.53
PHGDH-220ENST00000641570 KRTAP12-1P59990 96 aa5.48□□□□□ -1.53
PHGDH-220ENST00000641570 KRTAP12-2P59991 146 aa5.46□□□□□ -1.54
PHGDH-220ENST00000641570 CDC42SE1Q9NRR8 79 aa5.45□□□□□ -1.54
PHGDH-220ENST00000641570 SSPOA2VEC9 5147 aa5.44□□□□□ -1.54
PHGDH-220ENST00000641570 KRTAP10-5P60370 271 aa5.43□□□□□ -1.54
PHGDH-220ENST00000641570 BRK1Q8WUW1 75 aa5.38□□□□□ -1.55
PHGDH-220ENST00000641570 MT1XP80297 61 aa5.36□□□□□ -1.55
PHGDH-220ENST00000641570 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.35□□□□□ -1.55
PHGDH-220ENST00000641570 KRTAP9-7A8MTY7 169 aa5.3□□□□□ -1.56
PHGDH-220ENST00000641570 FCGBPQ9Y6R7 5405 aaPredicted RBP5.29□□□□□ -1.56
PHGDH-220ENST00000641570 TNP1P09430 55 aa5.25□□□□□ -1.57
PHGDH-220ENST00000641570 KRTAP4-8Q9BYQ9 185 aa5.2□□□□□ -1.58
PHGDH-220ENST00000641570 ROMO1P60602 79 aa5.17□□□□□ -1.58
PHGDH-220ENST00000641570 C10orf95Q9H7T3 257 aa5.17□□□□□ -1.58
PHGDH-220ENST00000641570 KRTAP10-12P60413 245 aa5.15□□□□□ -1.59
PHGDH-220ENST00000641570 KRTAP10-7P60409 375 aaPredicted RBP5.14□□□□□ -1.59
PHGDH-220ENST00000641570 KRTAP25-1Q3LHN0 102 aa5.14□□□□□ -1.59
PHGDH-220ENST00000641570 KRTAP8-1Q8IUC2 63 aa5.09□□□□□ -1.59
PHGDH-220ENST00000641570 PMAIP1Q13794 54 aa5.07□□□□□ -1.6
PHGDH-220ENST00000641570 PRO0628Q9UI54 55 aa5.06□□□□□ -1.6
PHGDH-220ENST00000641570 MACF1Q9UPN3 7388 aaKnown RBP5.03□□□□□ -1.6
PHGDH-220ENST00000641570 KRTAP6-3Q3LI67 103 aa5.02□□□□□ -1.61
PHGDH-220ENST00000641570 KRTAP4-12Q9BQ66 201 aa5□□□□□ -1.61
PHGDH-220ENST00000641570 SYNE2Q8WXH0 6885 aaKnown RBP4.99□□□□□ -1.61
PHGDH-220ENST00000641570 KRTAP4-8A0A0G2JLE6 195 aa4.98□□□□□ -1.61
PHGDH-220ENST00000641570 LCE3BQ5TA77 95 aa4.96□□□□□ -1.62
PHGDH-220ENST00000641570 LCE3AQ5TA76 89 aa4.95□□□□□ -1.62
PHGDH-220ENST00000641570 SPRR2FQ96RM1 72 aa4.95□□□□□ -1.62
PHGDH-220ENST00000641570 PP632Q6XCG6 107 aa4.94□□□□□ -1.62
PHGDH-220ENST00000641570 KMT2DO14686 5537 aa4.93□□□□□ -1.62
PHGDH-220ENST00000641570 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
PHGDH-220ENST00000641570 KRTAP5-9P26371 169 aa4.86□□□□□ -1.63
PHGDH-220ENST00000641570 KRTAP9-9Q9BYP9 154 aa4.86□□□□□ -1.63
PHGDH-220ENST00000641570 KRTAP9-4Q9BYQ2 154 aa4.86□□□□□ -1.63
PHGDH-220ENST00000641570 KRTAP19-5Q3LI72 72 aa4.83□□□□□ -1.64
PHGDH-220ENST00000641570 SVIPQ8NHG7 77 aa4.83□□□□□ -1.64
PHGDH-220ENST00000641570 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms