RNA–Protein interactions for RNA: ENST00000640769.1

RTTN-222, Transcript of rotatin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTTN, Length 8,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-222ENST00000640769 FRAS1Q86XX4 4008 aa3.48□□□□□ -1.85
RTTN-222ENST00000640769 BSNQ9UPA5 3926 aa3.45□□□□□ -1.86
RTTN-222ENST00000640769 CMYA5Q8N3K9 4069 aa3.42□□□□□ -1.86
RTTN-222ENST00000640769 KRTAP10-4P60372 401 aaPredicted RBP3.4□□□□□ -1.87
RTTN-222ENST00000640769 DNAH2Q9P225 4427 aa3.38□□□□□ -1.87
RTTN-222ENST00000640769 HUWE1Q7Z6Z7 4374 aaKnown RBP3.36□□□□□ -1.87
RTTN-222ENST00000640769 MT1HL1P0DM35 61 aa3.33□□□□□ -1.88
RTTN-222ENST00000640769 LCE3CQ5T5A8 94 aa3.32□□□□□ -1.88
RTTN-222ENST00000640769 KRTAP19-5Q3LI72 72 aa3.31□□□□□ -1.88
RTTN-222ENST00000640769 LCE3BQ5TA77 95 aa3.3□□□□□ -1.88
RTTN-222ENST00000640769 ANK2Q01484 3957 aa3.29□□□□□ -1.88
RTTN-222ENST00000640769 ANK3Q12955 4377 aaKnown RBP3.29□□□□□ -1.88
RTTN-222ENST00000640769 LYSTQ99698 3801 aa3.28□□□□□ -1.88
RTTN-222ENST00000640769 DNAH1Q9P2D7 4330 aa3.26□□□□□ -1.89
RTTN-222ENST00000640769 DNAH3Q8TD57 4116 aa3.25□□□□□ -1.89
RTTN-222ENST00000640769 KRTAP12-4P60329 112 aa3.24□□□□□ -1.89
RTTN-222ENST00000640769 KRTAP4-5Q9BYR2 181 aa3.24□□□□□ -1.89
RTTN-222ENST00000640769 DNAH6Q9C0G6 4158 aa3.22□□□□□ -1.89
RTTN-222ENST00000640769 SPRR2FQ96RM1 72 aa3.22□□□□□ -1.89
RTTN-222ENST00000640769 DNAH8Q96JB1 4490 aa3.21□□□□□ -1.9
RTTN-222ENST00000640769 DNAH7Q8WXX0 4024 aa3.2□□□□□ -1.9
RTTN-222ENST00000640769 KMT2AQ03164 3969 aa3.2□□□□□ -1.9
RTTN-222ENST00000640769 ZNF469Q96JG9 3925 aaPredicted RBP3.19□□□□□ -1.9
RTTN-222ENST00000640769 VPS13BQ7Z7G8 4022 aa3.18□□□□□ -1.9
RTTN-222ENST00000640769 HECTD4Q9Y4D8 3996 aa3.11□□□□□ -1.91
RTTN-222ENST00000640769 DNAH10Q8IVF4 4471 aa3.09□□□□□ -1.91
RTTN-222ENST00000640769 MT1GP13640 62 aa3.08□□□□□ -1.92
RTTN-222ENST00000640769 MT1HP80294 61 aa3.05□□□□□ -1.92
RTTN-222ENST00000640769 SPRR2GQ9BYE4 73 aa3.05□□□□□ -1.92
RTTN-222ENST00000640769 KRTAP4-1Q9BYQ7 146 aa3.04□□□□□ -1.92
RTTN-222ENST00000640769 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
RTTN-222ENST00000640769 SPRR2EP22531 72 aa3.01□□□□□ -1.93
RTTN-222ENST00000640769 SPRR2BP35325 72 aa3.01□□□□□ -1.93
RTTN-222ENST00000640769 SPRR2AP35326 72 aa3.01□□□□□ -1.93
RTTN-222ENST00000640769 MT2AP02795 61 aa3□□□□□ -1.93
RTTN-222ENST00000640769 FLGP20930 4061 aaPredicted RBP2.99□□□□□ -1.93
RTTN-222ENST00000640769 PRKDCP78527 4128 aaKnown RBP2.97□□□□□ -1.93
RTTN-222ENST00000640769 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
RTTN-222ENST00000640769 MT1FP04733 61 aa2.96□□□□□ -1.94
RTTN-222ENST00000640769 PRM1P04553 51 aa2.96□□□□□ -1.94
RTTN-222ENST00000640769 DNAH11Q96DT5 4516 aa2.93□□□□□ -1.94
RTTN-222ENST00000640769 DNAH17Q9UFH2 4485 aa2.93□□□□□ -1.94
RTTN-222ENST00000640769 FAT2Q9NYQ8 4349 aa2.91□□□□□ -1.94
RTTN-222ENST00000640769 VPS13DQ5THJ4 4388 aa2.9□□□□□ -1.94
RTTN-222ENST00000640769 SPRR2DP22532 72 aa2.9□□□□□ -1.95
RTTN-222ENST00000640769 LCE2BO14633 110 aa2.88□□□□□ -1.95
RTTN-222ENST00000640769 DNAH9Q9NYC9 4486 aa2.87□□□□□ -1.95
RTTN-222ENST00000640769 KRTAP19-4Q3LI73 84 aa2.83□□□□□ -1.96
RTTN-222ENST00000640769 DYNC2H1Q8NCM8 4307 aaKnown RBP2.82□□□□□ -1.96
RTTN-222ENST00000640769 SPRR5A0A1B0GTR4 108 aa2.8□□□□□ -1.96
RTTN-222ENST00000640769 KRTAP4-8A0A0G2JLE6 195 aa2.8□□□□□ -1.96
RTTN-222ENST00000640769 KRTAP4-8Q9BYQ9 185 aa2.8□□□□□ -1.96
RTTN-222ENST00000640769 MT1XP80297 61 aa2.78□□□□□ -1.96
RTTN-222ENST00000640769 PKD1P98161 4303 aa2.77□□□□□ -1.97
RTTN-222ENST00000640769 MT3P25713 68 aa2.77□□□□□ -1.97
RTTN-222ENST00000640769 KRTAP4-7Q9BYR0 210 aa2.76□□□□□ -1.97
RTTN-222ENST00000640769 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
RTTN-222ENST00000640769 PKHD1L1Q86WI1 4243 aa2.74□□□□□ -1.97
RTTN-222ENST00000640769 LCE2CQ5TA81 110 aa2.73□□□□□ -1.97
RTTN-222ENST00000640769 SACSQ9NZJ4 4579 aa2.72□□□□□ -1.97
RTTN-222ENST00000640769 APOBP04114 4563 aaKnown RBP2.71□□□□□ -1.98
RTTN-222ENST00000640769 FAT1Q14517 4588 aa2.7□□□□□ -1.98
RTTN-222ENST00000640769 DNAH5Q8TE73 4624 aa2.7□□□□□ -1.98
RTTN-222ENST00000640769 LCE1DQ5T752 114 aa2.69□□□□□ -1.98
RTTN-222ENST00000640769 KRTAP19-1Q8IUB9 90 aa2.69□□□□□ -1.98
RTTN-222ENST00000640769 MT4P47944 62 aa2.68□□□□□ -1.98
RTTN-222ENST00000640769 LOC100996750A0A140TA64 210 aa2.68□□□□□ -1.98
RTTN-222ENST00000640769 PLECQ15149 4684 aaKnown RBP2.67□□□□□ -1.98
RTTN-222ENST00000640769 LCE2DQ5TA82 110 aaPredicted RBP2.67□□□□□ -1.98
RTTN-222ENST00000640769 STARD9Q9P2P6 4700 aa2.67□□□□□ -1.98
RTTN-222ENST00000640769 KRTAP19-8Q3LI54 63 aa2.65□□□□□ -1.99
RTTN-222ENST00000640769 KRTAP4-9Q9BYQ8 210 aa2.61□□□□□ -1.99
RTTN-222ENST00000640769 MT1BP07438 61 aa2.59□□□□□ -1.99
RTTN-222ENST00000640769 MT1LQ93083 61 aa2.59□□□□□ -1.99
RTTN-222ENST00000640769 LRP1BQ9NZR2 4599 aa2.59□□□□□ -2
RTTN-222ENST00000640769 TNXBP22105 4242 aa2.59□□□□□ -2
RTTN-222ENST00000640769 RYR1P21817 5038 aa2.58□□□□□ -2
RTTN-222ENST00000640769 KRTAP19-3Q7Z4W3 81 aa2.58□□□□□ -2
RTTN-222ENST00000640769 PKHD1P08F94 4074 aa2.58□□□□□ -2
RTTN-222ENST00000640769 KRTAP17-1Q9BYP8 105 aa2.55□□□□□ -2
RTTN-222ENST00000640769 KRTAP4-3Q9BYR4 195 aa2.55□□□□□ -2
RTTN-222ENST00000640769 LCE5AQ5TCM9 118 aa2.54□□□□□ -2
RTTN-222ENST00000640769 LPAP08519 4548 aa2.54□□□□□ -2
RTTN-222ENST00000640769 LCE4AQ5TA78 99 aa2.53□□□□□ -2
RTTN-222ENST00000640769 HSPG2P98160 4391 aa2.53□□□□□ -2
RTTN-222ENST00000640769 LRP1Q07954 4544 aaKnown RBP2.53□□□□□ -2
RTTN-222ENST00000640769 MT1EP04732 61 aa2.5□□□□□ -2.01
RTTN-222ENST00000640769 DYNC1H1Q14204 4646 aaKnown RBP2.5□□□□□ -2.01
RTTN-222ENST00000640769 KRTAP9-8Q9BYQ0 159 aa2.49□□□□□ -2.01
RTTN-222ENST00000640769 FAT3Q8TDW7 4589 aa2.48□□□□□ -2.01
RTTN-222ENST00000640769 KRTAP6-2Q3LI66 62 aa2.46□□□□□ -2.02
RTTN-222ENST00000640769 MT1MQ8N339 61 aa2.46□□□□□ -2.02
RTTN-222ENST00000640769 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
RTTN-222ENST00000640769 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
RTTN-222ENST00000640769 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
RTTN-222ENST00000640769 LCE1AQ5T7P2 110 aa2.43□□□□□ -2.02
RTTN-222ENST00000640769 MYCBP2O75592 4640 aa2.43□□□□□ -2.02
RTTN-222ENST00000640769 KRTAP9-3Q9BYQ3 159 aa2.42□□□□□ -2.02
RTTN-222ENST00000640769 KRTAP2-3P0C7H8 128 aa2.39□□□□□ -2.03
RTTN-222ENST00000640769 KRTAP2-4Q9BYR9 128 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms