RNA–Protein interactions for RNA: ENST00000640172.1

PAX6-265, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-265ENST00000640172 RPL37P61927 97 aaKnown RBP6.89□□□□□ -1.31
PAX6-265ENST00000640172 PKHD1L1Q86WI1 4243 aa6.87□□□□□ -1.31
PAX6-265ENST00000640172 HSPG2P98160 4391 aa6.87□□□□□ -1.31
PAX6-265ENST00000640172 KRTAP3-3Q9BYR6 98 aa6.87□□□□□ -1.31
PAX6-265ENST00000640172 KRTAP15-1Q3LI76 137 aa6.86□□□□□ -1.31
PAX6-265ENST00000640172 KRTAP3-2Q9BYR7 98 aa6.85□□□□□ -1.31
PAX6-265ENST00000640172 DYNC1H1Q14204 4646 aaKnown RBP6.84□□□□□ -1.31
PAX6-265ENST00000640172 MYCBP2O75592 4640 aa6.82□□□□□ -1.32
PAX6-265ENST00000640172 APOBP04114 4563 aaKnown RBP6.81□□□□□ -1.32
PAX6-265ENST00000640172 SMR3BP02814 79 aaPredicted RBP6.78□□□□□ -1.32
PAX6-265ENST00000640172 KRTAP12-2P59991 146 aa6.77□□□□□ -1.33
PAX6-265ENST00000640172 RPS29P62273 56 aaKnown RBP6.77□□□□□ -1.33
PAX6-265ENST00000640172 LRP1Q07954 4544 aaKnown RBP6.73□□□□□ -1.33
PAX6-265ENST00000640172 KRTAP10-8P60410 259 aa6.72□□□□□ -1.33
PAX6-265ENST00000640172 S4R3F8 94 aa6.72□□□□□ -1.33
PAX6-265ENST00000640172 LPAP08519 4548 aa6.72□□□□□ -1.33
PAX6-265ENST00000640172 FAT3Q8TDW7 4589 aa6.69□□□□□ -1.34
PAX6-265ENST00000640172 KRTAP12-1P59990 96 aa6.63□□□□□ -1.35
PAX6-265ENST00000640172 TNXBP22105 4242 aa6.59□□□□□ -1.36
PAX6-265ENST00000640172 KRTAP10-4P60372 401 aaPredicted RBP6.58□□□□□ -1.36
PAX6-265ENST00000640172 XP32Q5T750 250 aa6.57□□□□□ -1.36
PAX6-265ENST00000640172 LCE2DQ5TA82 110 aaPredicted RBP6.55□□□□□ -1.36
PAX6-265ENST00000640172 KMT2CQ8NEZ4 4911 aaKnown RBP6.5□□□□□ -1.37
PAX6-265ENST00000640172 LRP2P98164 4655 aa6.46□□□□□ -1.37
PAX6-265ENST00000640172 A0A0A0MQY5 61 aa6.41□□□□□ -1.38
PAX6-265ENST00000640172 PLAC4Q8WY50 150 aa6.32□□□□□ -1.4
PAX6-265ENST00000640172 M0QZ58 72 aa6.31□□□□□ -1.4
PAX6-265ENST00000640172 A0A1B0GVY2 172 aa6.3□□□□□ -1.4
PAX6-265ENST00000640172 RYR1P21817 5038 aa6.28□□□□□ -1.4
PAX6-265ENST00000640172 LUZP6Q538Z0 58 aa6.26□□□□□ -1.41
PAX6-265ENST00000640172 LORP23490 312 aaPredicted RBP6.24□□□□□ -1.41
PAX6-265ENST00000640172 RYR2Q92736 4967 aa6.23□□□□□ -1.41
PAX6-265ENST00000640172 KRTAP17-1Q9BYP8 105 aa6.19□□□□□ -1.42
PAX6-265ENST00000640172 R4GN34 69 aa6.18□□□□□ -1.42
PAX6-265ENST00000640172 ABCA13Q86UQ4 5058 aa6.15□□□□□ -1.42
PAX6-265ENST00000640172 KIAA1109Q2LD37 5005 aa6.08□□□□□ -1.44
PAX6-265ENST00000640172 Q5VSD8 79 aa6.07□□□□□ -1.44
PAX6-265ENST00000640172 MT1HL1P0DM35 61 aa6.04□□□□□ -1.44
PAX6-265ENST00000640172 RYR3Q15413 4870 aa6.03□□□□□ -1.44
PAX6-265ENST00000640172 MUC17Q685J3 4493 aa6.03□□□□□ -1.44
PAX6-265ENST00000640172 MUC2Q02817 5179 aa5.98□□□□□ -1.45
PAX6-265ENST00000640172 CAMK2N1Q7Z7J9 78 aa5.9□□□□□ -1.46
PAX6-265ENST00000640172 BIRC6Q9NR09 4857 aa5.9□□□□□ -1.47
PAX6-265ENST00000640172 PP632Q6XCG6 107 aa5.89□□□□□ -1.47
PAX6-265ENST00000640172 KRTAP4-1Q9BYQ7 146 aa5.87□□□□□ -1.47
PAX6-265ENST00000640172 EPPK1P58107 5090 aaKnown RBP5.83□□□□□ -1.48
PAX6-265ENST00000640172 SPRR5A0A1B0GTR4 108 aa5.79□□□□□ -1.48
PAX6-265ENST00000640172 KRTAP19-2Q3LHN2 52 aa5.76□□□□□ -1.49
PAX6-265ENST00000640172 PCLOQ9Y6V0 5065 aa5.75□□□□□ -1.49
PAX6-265ENST00000640172 TNP1P09430 55 aa5.68□□□□□ -1.5
PAX6-265ENST00000640172 HERC2O95714 4834 aa5.67□□□□□ -1.5
PAX6-265ENST00000640172 FLGP20930 4061 aaPredicted RBP5.66□□□□□ -1.5
PAX6-265ENST00000640172 KRTAP4-5Q9BYR2 181 aa5.66□□□□□ -1.5
PAX6-265ENST00000640172 FAT4Q6V0I7 4981 aa5.63□□□□□ -1.51
PAX6-265ENST00000640172 SEC61BP60468 96 aaKnown RBP5.6□□□□□ -1.51
PAX6-265ENST00000640172 KRTAP23-1A1A580 65 aa5.55□□□□□ -1.52
PAX6-265ENST00000640172 HERC1Q15751 4861 aa5.49□□□□□ -1.53
PAX6-265ENST00000640172 PRO2289Q9P1D8 64 aa5.48□□□□□ -1.53
PAX6-265ENST00000640172 LCE3AQ5TA76 89 aa5.48□□□□□ -1.53
PAX6-265ENST00000640172 HMCN2Q8NDA2 5059 aa5.4□□□□□ -1.54
PAX6-265ENST00000640172 KRTAP19-1Q8IUB9 90 aa5.37□□□□□ -1.55
PAX6-265ENST00000640172 UBR4Q5T4S7 5183 aa5.34□□□□□ -1.56
PAX6-265ENST00000640172 LCE2BO14633 110 aa5.31□□□□□ -1.56
PAX6-265ENST00000640172 LOC100996750A0A140TA64 210 aa5.3□□□□□ -1.56
PAX6-265ENST00000640172 SPRR2GQ9BYE4 73 aa5.3□□□□□ -1.56
PAX6-265ENST00000640172 KRTAP4-6Q9BYQ5 205 aa5.3□□□□□ -1.56
PAX6-265ENST00000640172 INE1O15225 51 aa5.28□□□□□ -1.56
PAX6-265ENST00000640172 RNF213Q63HN8 5207 aa5.26□□□□□ -1.57
PAX6-265ENST00000640172 J3QL48 77 aa5.25□□□□□ -1.57
PAX6-265ENST00000640172 LCE2CQ5TA81 110 aa5.23□□□□□ -1.57
PAX6-265ENST00000640172 KRTAP8-1Q8IUC2 63 aa5.23□□□□□ -1.57
PAX6-265ENST00000640172 KRTAP10-12P60413 245 aa5.18□□□□□ -1.58
PAX6-265ENST00000640172 KRTAP12-3P60328 96 aa5.13□□□□□ -1.59
PAX6-265ENST00000640172 MT1FP04733 61 aa5.12□□□□□ -1.59
PAX6-265ENST00000640172 KRTAP10-5P60370 271 aa5.11□□□□□ -1.59
PAX6-265ENST00000640172 MT1XP80297 61 aa5.08□□□□□ -1.6
PAX6-265ENST00000640172 M0R2T5 61 aa5.06□□□□□ -1.6
PAX6-265ENST00000640172 KMT2DO14686 5537 aa5.06□□□□□ -1.6
PAX6-265ENST00000640172 KRTAP10-10P60014 251 aa5.05□□□□□ -1.6
PAX6-265ENST00000640172 MT2AP02795 61 aa5.05□□□□□ -1.6
PAX6-265ENST00000640172 KRTAP10-7P60409 375 aaPredicted RBP5.04□□□□□ -1.6
PAX6-265ENST00000640172 MT1BP07438 61 aa5.01□□□□□ -1.61
PAX6-265ENST00000640172 MT1HP80294 61 aa5.01□□□□□ -1.61
PAX6-265ENST00000640172 KRTAP9-8Q9BYQ0 159 aa5□□□□□ -1.61
PAX6-265ENST00000640172 LCE2AQ5TA79 106 aaPredicted RBP4.98□□□□□ -1.61
PAX6-265ENST00000640172 KRTAP19-8Q3LI54 63 aa4.96□□□□□ -1.61
PAX6-265ENST00000640172 USH2AO75445 5202 aa4.92□□□□□ -1.62
PAX6-265ENST00000640172 KRTAP9-6A8MVA2 160 aa4.9□□□□□ -1.63
PAX6-265ENST00000640172 LCE3CQ5T5A8 94 aa4.85□□□□□ -1.63
PAX6-265ENST00000640172 KRTAP19-5Q3LI72 72 aa4.85□□□□□ -1.63
PAX6-265ENST00000640172 KRTAP4-7Q9BYR0 210 aa4.75□□□□□ -1.65
PAX6-265ENST00000640172 KRTAP9-3Q9BYQ3 159 aa4.74□□□□□ -1.65
PAX6-265ENST00000640172 KRTAP4-8A0A0G2JLE6 195 aa4.73□□□□□ -1.65
PAX6-265ENST00000640172 KRTAP4-8Q9BYQ9 185 aa4.73□□□□□ -1.65
PAX6-265ENST00000640172 KRTAP2-3P0C7H8 128 aa4.7□□□□□ -1.66
PAX6-265ENST00000640172 KRTAP2-4Q9BYR9 128 aa4.7□□□□□ -1.66
PAX6-265ENST00000640172 KRTAP2-1Q9BYU5 128 aa4.7□□□□□ -1.66
PAX6-265ENST00000640172 KRTAP9-2Q9BYQ4 174 aa4.55□□□□□ -1.68
PAX6-265ENST00000640172 KRTAP19-7Q3SYF9 63 aa4.54□□□□□ -1.68
PAX6-265ENST00000640172 KRTAP9-6A0A140TA67 174 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms