RNA–Protein interactions for RNA: ENST00000639658.1

POLR2B-213, Transcript of RNA polymerase II subunit B, humanhuman

TSL 5 BASIC

Gene POLR2B, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-213ENST00000639658 APOBP04114 4563 aaKnown RBP2.77□□□□□ -1.97
POLR2B-213ENST00000639658 LRP1BQ9NZR2 4599 aa2.77□□□□□ -1.97
POLR2B-213ENST00000639658 KRTAP23-1A1A580 65 aa2.76□□□□□ -1.97
POLR2B-213ENST00000639658 COL7A1Q02388 2944 aa2.76□□□□□ -1.97
POLR2B-213ENST00000639658 NOTCH2Q04721 2471 aa2.76□□□□□ -1.97
POLR2B-213ENST00000639658 LRP1Q07954 4544 aaKnown RBP2.76□□□□□ -1.97
POLR2B-213ENST00000639658 STARD9Q9P2P6 4700 aa2.76□□□□□ -1.97
POLR2B-213ENST00000639658 TGP01266 2768 aa2.74□□□□□ -1.97
POLR2B-213ENST00000639658 A0A0D9SG42 100 aa2.73□□□□□ -1.97
POLR2B-213ENST00000639658 NBEAL1Q6ZS30 2694 aa2.73□□□□□ -1.97
POLR2B-213ENST00000639658 NSD1Q96L73 2696 aaPredicted RBP2.72□□□□□ -1.97
POLR2B-213ENST00000639658 DYNC1H1Q14204 4646 aaKnown RBP2.69□□□□□ -1.98
POLR2B-213ENST00000639658 ITPR2Q14571 2701 aa2.69□□□□□ -1.98
POLR2B-213ENST00000639658 COL6A5A8TX70 2615 aa2.67□□□□□ -1.98
POLR2B-213ENST00000639658 FAT3Q8TDW7 4589 aa2.66□□□□□ -1.98
POLR2B-213ENST00000639658 KRTAP10-2P60368 255 aa2.66□□□□□ -1.98
POLR2B-213ENST00000639658 KRTAP10-1P60331 282 aa2.65□□□□□ -1.98
POLR2B-213ENST00000639658 R4GN34 69 aa2.65□□□□□ -1.99
POLR2B-213ENST00000639658 KRTAP17-1Q9BYP8 105 aa2.65□□□□□ -1.99
POLR2B-213ENST00000639658 FAT1Q14517 4588 aa2.64□□□□□ -1.99
POLR2B-213ENST00000639658 C9orf92A6NGG3 77 aa2.64□□□□□ -1.99
POLR2B-213ENST00000639658 ACANP16112 2415 aa2.64□□□□□ -1.99
POLR2B-213ENST00000639658 KRTAP10-4P60372 401 aaPredicted RBP2.63□□□□□ -1.99
POLR2B-213ENST00000639658 FLGP20930 4061 aaPredicted RBP2.62□□□□□ -1.99
POLR2B-213ENST00000639658 KRTAP10-8P60410 259 aa2.62□□□□□ -1.99
POLR2B-213ENST00000639658 ATRQ13535 2644 aa2.61□□□□□ -1.99
POLR2B-213ENST00000639658 DNHD1Q96M86 4753 aa2.59□□□□□ -1.99
POLR2B-213ENST00000639658 NOTCH1P46531 2555 aa2.59□□□□□ -2
POLR2B-213ENST00000639658 STAB2Q8WWQ8 2551 aa2.59□□□□□ -2
POLR2B-213ENST00000639658 Q5VSD8 79 aa2.57□□□□□ -2
POLR2B-213ENST00000639658 LCE2DQ5TA82 110 aaPredicted RBP2.54□□□□□ -2
POLR2B-213ENST00000639658 STAB1Q9NY15 2570 aa2.51□□□□□ -2.01
POLR2B-213ENST00000639658 MGAM2Q2M2H8 2515 aa2.49□□□□□ -2.01
POLR2B-213ENST00000639658 A0A1B0GVY2 172 aa2.47□□□□□ -2.01
POLR2B-213ENST00000639658 HYDINQ4G0P3 5121 aa2.46□□□□□ -2.02
POLR2B-213ENST00000639658 TNP1P09430 55 aa2.45□□□□□ -2.02
POLR2B-213ENST00000639658 BIRC6Q9NR09 4857 aa2.42□□□□□ -2.02
POLR2B-213ENST00000639658 HERC1Q15751 4861 aa2.42□□□□□ -2.02
POLR2B-213ENST00000639658 LORP23490 312 aaPredicted RBP2.4□□□□□ -2.02
POLR2B-213ENST00000639658 MUC17Q685J3 4493 aa2.4□□□□□ -2.03
POLR2B-213ENST00000639658 DMBT1Q9UGM3 2413 aaPredicted RBP2.39□□□□□ -2.03
POLR2B-213ENST00000639658 KRTAP19-2Q3LHN2 52 aa2.36□□□□□ -2.03
POLR2B-213ENST00000639658 RYR3Q15413 4870 aa2.35□□□□□ -2.03
POLR2B-213ENST00000639658 LPAP08519 4548 aa2.34□□□□□ -2.03
POLR2B-213ENST00000639658 KRTAP8-1Q8IUC2 63 aa2.34□□□□□ -2.03
POLR2B-213ENST00000639658 PCLOQ9Y6V0 5065 aa2.33□□□□□ -2.04
POLR2B-213ENST00000639658 KRTAP10-10P60014 251 aa2.32□□□□□ -2.04
POLR2B-213ENST00000639658 MT1HL1P0DM35 61 aa2.3□□□□□ -2.04
POLR2B-213ENST00000639658 SMR3BP02814 79 aaPredicted RBP2.3□□□□□ -2.04
POLR2B-213ENST00000639658 KRTAP10-12P60413 245 aa2.28□□□□□ -2.04
POLR2B-213ENST00000639658 KRTAP9-6A0A140TA67 174 aa2.27□□□□□ -2.05
POLR2B-213ENST00000639658 SPRR2GQ9BYE4 73 aa2.25□□□□□ -2.05
POLR2B-213ENST00000639658 KMT2CQ8NEZ4 4911 aaKnown RBP2.25□□□□□ -2.05
POLR2B-213ENST00000639658 RYR2Q92736 4967 aa2.25□□□□□ -2.05
POLR2B-213ENST00000639658 LRP2P98164 4655 aa2.23□□□□□ -2.05
POLR2B-213ENST00000639658 LCE3AQ5TA76 89 aa2.23□□□□□ -2.05
POLR2B-213ENST00000639658 KRTAP10-5P60370 271 aa2.22□□□□□ -2.05
POLR2B-213ENST00000639658 UBR4Q5T4S7 5183 aa2.22□□□□□ -2.05
POLR2B-213ENST00000639658 EPPK1P58107 5090 aaKnown RBP2.21□□□□□ -2.06
POLR2B-213ENST00000639658 HERC2O95714 4834 aa2.2□□□□□ -2.06
POLR2B-213ENST00000639658 RYR1P21817 5038 aa2.19□□□□□ -2.06
POLR2B-213ENST00000639658 KRTAP2-3P0C7H8 128 aa2.19□□□□□ -2.06
POLR2B-213ENST00000639658 KRTAP2-4Q9BYR9 128 aa2.19□□□□□ -2.06
POLR2B-213ENST00000639658 KRTAP2-1Q9BYU5 128 aa2.19□□□□□ -2.06
POLR2B-213ENST00000639658 KRTAP19-4Q3LI73 84 aa2.17□□□□□ -2.06
POLR2B-213ENST00000639658 KIAA1109Q2LD37 5005 aa2.17□□□□□ -2.06
POLR2B-213ENST00000639658 KRTAP4-1Q9BYQ7 146 aa2.17□□□□□ -2.06
POLR2B-213ENST00000639658 LOC100996750A0A140TA64 210 aa2.15□□□□□ -2.07
POLR2B-213ENST00000639658 KRTAP4-6Q9BYQ5 205 aa2.15□□□□□ -2.07
POLR2B-213ENST00000639658 KRTAP19-1Q8IUB9 90 aa2.15□□□□□ -2.07
POLR2B-213ENST00000639658 KRTAP9-2Q9BYQ4 174 aa2.15□□□□□ -2.07
POLR2B-213ENST00000639658 KRTAP12-3P60328 96 aa2.14□□□□□ -2.07
POLR2B-213ENST00000639658 KRTAP19-8Q3LI54 63 aa2.13□□□□□ -2.07
POLR2B-213ENST00000639658 LCE3CQ5T5A8 94 aa2.08□□□□□ -2.08
POLR2B-213ENST00000639658 HMCN2Q8NDA2 5059 aa2.07□□□□□ -2.08
POLR2B-213ENST00000639658 KRTAP10-7P60409 375 aaPredicted RBP2.07□□□□□ -2.08
POLR2B-213ENST00000639658 MT1XP80297 61 aa2.05□□□□□ -2.08
POLR2B-213ENST00000639658 LCE2BO14633 110 aa2.04□□□□□ -2.08
POLR2B-213ENST00000639658 KRTAP19-5Q3LI72 72 aa2.02□□□□□ -2.09
POLR2B-213ENST00000639658 KRTAP2-2Q9BYT5 123 aa2.02□□□□□ -2.09
POLR2B-213ENST00000639658 LCE2CQ5TA81 110 aa2.01□□□□□ -2.09
POLR2B-213ENST00000639658 ABCA13Q86UQ4 5058 aa2□□□□□ -2.09
POLR2B-213ENST00000639658 MT1BP07438 61 aa1.99□□□□□ -2.09
POLR2B-213ENST00000639658 KRTAP9-6A8MVA2 160 aa1.99□□□□□ -2.09
POLR2B-213ENST00000639658 KRTAP9-7A8MTY7 169 aa1.98□□□□□ -2.09
POLR2B-213ENST00000639658 CRCT1Q9UGL9 99 aa1.97□□□□□ -2.09
POLR2B-213ENST00000639658 MUC2Q02817 5179 aa1.94□□□□□ -2.1
POLR2B-213ENST00000639658 M0R2T5 61 aa1.94□□□□□ -2.1
POLR2B-213ENST00000639658 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.94□□□□□ -2.1
POLR2B-213ENST00000639658 MT2AP02795 61 aa1.93□□□□□ -2.1
POLR2B-213ENST00000639658 KRTAP4-5Q9BYR2 181 aa1.93□□□□□ -2.1
POLR2B-213ENST00000639658 MT1FP04733 61 aa1.92□□□□□ -2.1
POLR2B-213ENST00000639658 KRTAP9-8Q9BYQ0 159 aa1.92□□□□□ -2.1
POLR2B-213ENST00000639658 KRTAP4-8Q9BYQ9 185 aa1.88□□□□□ -2.11
POLR2B-213ENST00000639658 MT1HP80294 61 aa1.88□□□□□ -2.11
POLR2B-213ENST00000639658 MT1EP04732 61 aa1.88□□□□□ -2.11
POLR2B-213ENST00000639658 KRTAP6-3Q3LI67 103 aa1.88□□□□□ -2.11
POLR2B-213ENST00000639658 LCE2AQ5TA79 106 aaPredicted RBP1.88□□□□□ -2.11
POLR2B-213ENST00000639658 FAT4Q6V0I7 4981 aa1.86□□□□□ -2.11
POLR2B-213ENST00000639658 LCE3BQ5TA77 95 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms