RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 CYP4F30PQ9H0H9 118 aa7.32□□□□□ -1.24
COLCA2-207ENST00000639470 KRTAP19-8Q3LI54 63 aa7.31□□□□□ -1.24
COLCA2-207ENST00000639470 A6NN06 94 aa7.29□□□□□ -1.24
COLCA2-207ENST00000639470 Q5VV11 94 aa7.29□□□□□ -1.24
COLCA2-207ENST00000639470 IMUPQ9GZP8 106 aa7.27□□□□□ -1.25
COLCA2-207ENST00000639470 MT-ATP8P03928 68 aa7.26□□□□□ -1.25
COLCA2-207ENST00000639470 KLKP1Q107X0 134 aa7.26□□□□□ -1.25
COLCA2-207ENST00000639470 TRAV22A0A0B4J277 110 aa7.25□□□□□ -1.25
COLCA2-207ENST00000639470 UQCRQO14949 82 aa7.24□□□□□ -1.25
COLCA2-207ENST00000639470 KRTAP10-5P60370 271 aa7.21□□□□□ -1.26
COLCA2-207ENST00000639470 LOC101927531A0A1B0GV80 90 aa7.19□□□□□ -1.26
COLCA2-207ENST00000639470 OCR1Q9BZK8 76 aa7.19□□□□□ -1.26
COLCA2-207ENST00000639470 H0Y9P7 68 aa7.18□□□□□ -1.26
COLCA2-207ENST00000639470 ATOX1O00244 68 aa7.18□□□□□ -1.26
COLCA2-207ENST00000639470 SCGB1A1P11684 91 aa7.17□□□□□ -1.26
COLCA2-207ENST00000639470 MP68P56378 58 aa7.11□□□□□ -1.27
COLCA2-207ENST00000639470 SMIM20Q8N5G0 67 aa7.08□□□□□ -1.28
COLCA2-207ENST00000639470 LINC00208Q96KT6 92 aa7.08□□□□□ -1.28
COLCA2-207ENST00000639470 H3BPC8 53 aa7.07□□□□□ -1.28
COLCA2-207ENST00000639470 NDUFC1O43677 76 aa7.05□□□□□ -1.28
COLCA2-207ENST00000639470 TRAV7A0A075B6U4 112 aa7.04□□□□□ -1.28
COLCA2-207ENST00000639470 ADM2Q7Z4H4 148 aa7.04□□□□□ -1.28
COLCA2-207ENST00000639470 CRIPTQ9P021 101 aa7.03□□□□□ -1.28
COLCA2-207ENST00000639470 NEBP20929 6669 aa7□□□□□ -1.29
COLCA2-207ENST00000639470 H0YAA0 97 aa7□□□□□ -1.29
COLCA2-207ENST00000639470 MUC12Q9UKN1 5478 aa6.98□□□□□ -1.29
COLCA2-207ENST00000639470 KRTAP5-9P26371 169 aa6.97□□□□□ -1.29
COLCA2-207ENST00000639470 A8MUN3 132 aa6.94□□□□□ -1.3
COLCA2-207ENST00000639470 SERP2Q8N6R1 65 aa6.93□□□□□ -1.3
COLCA2-207ENST00000639470 P0C880 135 aa6.92□□□□□ -1.3
COLCA2-207ENST00000639470 MT1XP80297 61 aa6.92□□□□□ -1.3
COLCA2-207ENST00000639470 KMT2DO14686 5537 aa6.89□□□□□ -1.31
COLCA2-207ENST00000639470 KRTAP20-1Q3LI63 56 aa6.87□□□□□ -1.31
COLCA2-207ENST00000639470 C20orf197Q8N268 126 aa6.85□□□□□ -1.31
COLCA2-207ENST00000639470 SNURFQ9Y675 71 aa6.84□□□□□ -1.31
COLCA2-207ENST00000639470 DMAC1Q96GE9 116 aa6.82□□□□□ -1.32
COLCA2-207ENST00000639470 COX7CP15954 63 aa6.81□□□□□ -1.32
COLCA2-207ENST00000639470 MDN1Q9NU22 5596 aa6.8□□□□□ -1.32
COLCA2-207ENST00000639470 M0QZ58 72 aa6.79□□□□□ -1.32
COLCA2-207ENST00000639470 SPRR2FQ96RM1 72 aa6.79□□□□□ -1.32
COLCA2-207ENST00000639470 R4GN34 69 aa6.79□□□□□ -1.32
COLCA2-207ENST00000639470 PLAC4Q8WY50 150 aa6.78□□□□□ -1.32
COLCA2-207ENST00000639470 LOC100996750A0A140TA64 210 aa6.76□□□□□ -1.33
COLCA2-207ENST00000639470 KRTAP4-6Q9BYQ5 205 aa6.76□□□□□ -1.33
COLCA2-207ENST00000639470 PRO2289Q9P1D8 64 aa6.76□□□□□ -1.33
COLCA2-207ENST00000639470 ANAPC13Q9BS18 74 aa6.75□□□□□ -1.33
COLCA2-207ENST00000639470 LINC01554Q52M75 96 aa6.74□□□□□ -1.33
COLCA2-207ENST00000639470 SPANXA2-OT1Q8N9U9 137 aa6.74□□□□□ -1.33
COLCA2-207ENST00000639470 KRTAP4-8A0A0G2JLE6 195 aa6.72□□□□□ -1.33
COLCA2-207ENST00000639470 SPRR2EP22531 72 aa6.72□□□□□ -1.33
COLCA2-207ENST00000639470 SPRR2BP35325 72 aa6.72□□□□□ -1.33
COLCA2-207ENST00000639470 SPRR2AP35326 72 aa6.72□□□□□ -1.33
COLCA2-207ENST00000639470 KRTAP4-8Q9BYQ9 185 aa6.72□□□□□ -1.33
COLCA2-207ENST00000639470 ACYP2P14621 99 aa6.7□□□□□ -1.34
COLCA2-207ENST00000639470 KRTAP8-1Q8IUC2 63 aa6.7□□□□□ -1.34
COLCA2-207ENST00000639470 PCP4P48539 62 aa6.65□□□□□ -1.34
COLCA2-207ENST00000639470 KRTAP12-2P59991 146 aa6.65□□□□□ -1.34
COLCA2-207ENST00000639470 KRTAP10-7P60409 375 aaPredicted RBP6.64□□□□□ -1.35
COLCA2-207ENST00000639470 CYSTM1Q9H1C7 97 aa6.64□□□□□ -1.35
COLCA2-207ENST00000639470 H7BZZ5 65 aa6.63□□□□□ -1.35
COLCA2-207ENST00000639470 LCE1AQ5T7P2 110 aa6.63□□□□□ -1.35
COLCA2-207ENST00000639470 KRTAP2-3P0C7H8 128 aa6.62□□□□□ -1.35
COLCA2-207ENST00000639470 KRTAP2-4Q9BYR9 128 aa6.62□□□□□ -1.35
COLCA2-207ENST00000639470 CHKB-CPT1BH3BT56 60 aa6.6□□□□□ -1.35
COLCA2-207ENST00000639470 CCDC179H3BU77 68 aa6.59□□□□□ -1.35
COLCA2-207ENST00000639470 SPTSSBQ8NFR3 76 aa6.58□□□□□ -1.36
COLCA2-207ENST00000639470 COA5Q86WW8 74 aa6.52□□□□□ -1.37
COLCA2-207ENST00000639470 KRTAP10-12P60413 245 aa6.51□□□□□ -1.37
COLCA2-207ENST00000639470 SPRR2DP22532 72 aa6.47□□□□□ -1.37
COLCA2-207ENST00000639470 ATP5EP56381 51 aaPredicted RBP6.46□□□□□ -1.38
COLCA2-207ENST00000639470 KRTAP13-4Q3LI77 160 aa6.46□□□□□ -1.38
COLCA2-207ENST00000639470 KRTAP2-2Q9BYT5 123 aa6.41□□□□□ -1.38
COLCA2-207ENST00000639470 KRTAP2-1Q9BYU5 128 aa6.41□□□□□ -1.38
COLCA2-207ENST00000639470 TMEM258P61165 79 aa6.4□□□□□ -1.38
COLCA2-207ENST00000639470 LCE3BQ5TA77 95 aa6.3□□□□□ -1.4
COLCA2-207ENST00000639470 SEC61GP60059 68 aa6.28□□□□□ -1.4
COLCA2-207ENST00000639470 SERP1Q9Y6X1 66 aa6.25□□□□□ -1.41
COLCA2-207ENST00000639470 CAMK2N1Q7Z7J9 78 aa6.24□□□□□ -1.41
COLCA2-207ENST00000639470 A0A0D9SG42 100 aa6.21□□□□□ -1.42
COLCA2-207ENST00000639470 KRTAP19-7Q3SYF9 63 aa6.19□□□□□ -1.42
COLCA2-207ENST00000639470 A0A1B0GU69 56 aa6.18□□□□□ -1.42
COLCA2-207ENST00000639470 SPATA8Q6RVD6 105 aa6.17□□□□□ -1.42
COLCA2-207ENST00000639470 A0A1B0GU33 70 aa6.13□□□□□ -1.43
COLCA2-207ENST00000639470 MT1EP04732 61 aa6.12□□□□□ -1.43
COLCA2-207ENST00000639470 KRTAP4-12Q9BQ66 201 aa6.12□□□□□ -1.43
COLCA2-207ENST00000639470 LINC01558Q9Y6Z2 57 aa6.12□□□□□ -1.43
COLCA2-207ENST00000639470 H3BS24 57 aa6.11□□□□□ -1.43
COLCA2-207ENST00000639470 RPS28P62857 69 aaKnown RBP6.11□□□□□ -1.43
COLCA2-207ENST00000639470 PRR15LQ9BU68 103 aa6.1□□□□□ -1.43
COLCA2-207ENST00000639470 LCE5AQ5TCM9 118 aa6.09□□□□□ -1.43
COLCA2-207ENST00000639470 SPINT4Q6UDR6 99 aa6.07□□□□□ -1.44
COLCA2-207ENST00000639470 KRTAP12-1P59990 96 aa6.06□□□□□ -1.44
COLCA2-207ENST00000639470 KRTAP19-3Q7Z4W3 81 aa6.05□□□□□ -1.44
COLCA2-207ENST00000639470 KRTAP19-5Q3LI72 72 aa6.02□□□□□ -1.45
COLCA2-207ENST00000639470 KRTAP4-9Q9BYQ8 210 aa5.98□□□□□ -1.45
COLCA2-207ENST00000639470 V9GYY9 64 aa5.98□□□□□ -1.45
COLCA2-207ENST00000639470 SMIM26A0A096LP01 95 aa5.96□□□□□ -1.46
COLCA2-207ENST00000639470 A8MU10 97 aa5.96□□□□□ -1.46
COLCA2-207ENST00000639470 Q1T7F1 81 aa5.95□□□□□ -1.46
COLCA2-207ENST00000639470 DSTQ03001 7570 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms