RNA–Protein interactions for RNA: ENST00000639418.1

SPIN3-221, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-221ENST00000639418 A0A1B0GU33 70 aa6.98□□□□□ -1.29
SPIN3-221ENST00000639418 H1FX-AS1Q4G0G2 97 aa6.94□□□□□ -1.3
SPIN3-221ENST00000639418 COX6B2Q6YFQ2 88 aa6.94□□□□□ -1.3
SPIN3-221ENST00000639418 RYR2Q92736 4967 aa6.92□□□□□ -1.3
SPIN3-221ENST00000639418 K7ERS5 55 aa6.9□□□□□ -1.31
SPIN3-221ENST00000639418 KRTAP15-1Q3LI76 137 aa6.87□□□□□ -1.31
SPIN3-221ENST00000639418 KRTAP10-8P60410 259 aa6.81□□□□□ -1.32
SPIN3-221ENST00000639418 TPRXLQ17RH7 258 aa6.81□□□□□ -1.32
SPIN3-221ENST00000639418 RYR3Q15413 4870 aa6.79□□□□□ -1.32
SPIN3-221ENST00000639418 RPL37P61927 97 aaKnown RBP6.79□□□□□ -1.32
SPIN3-221ENST00000639418 FAT3Q8TDW7 4589 aa6.78□□□□□ -1.32
SPIN3-221ENST00000639418 KRTAP3-3Q9BYR6 98 aa6.77□□□□□ -1.33
SPIN3-221ENST00000639418 Q5VSD8 79 aa6.75□□□□□ -1.33
SPIN3-221ENST00000639418 LRP1Q07954 4544 aaKnown RBP6.75□□□□□ -1.33
SPIN3-221ENST00000639418 TNXBP22105 4242 aa6.75□□□□□ -1.33
SPIN3-221ENST00000639418 XP32Q5T750 250 aa6.75□□□□□ -1.33
SPIN3-221ENST00000639418 KRTAP10-6P60371 365 aaPredicted RBP6.73□□□□□ -1.33
SPIN3-221ENST00000639418 C10orf95Q9H7T3 257 aa6.73□□□□□ -1.33
SPIN3-221ENST00000639418 LUZP6Q538Z0 58 aa6.72□□□□□ -1.33
SPIN3-221ENST00000639418 S4R3F8 94 aa6.71□□□□□ -1.34
SPIN3-221ENST00000639418 HSPG2P98160 4391 aa6.69□□□□□ -1.34
SPIN3-221ENST00000639418 KRTAP3-2Q9BYR7 98 aa6.68□□□□□ -1.34
SPIN3-221ENST00000639418 KRTAP13-4Q3LI77 160 aa6.67□□□□□ -1.34
SPIN3-221ENST00000639418 DMBT1Q9UGM3 2413 aaPredicted RBP6.65□□□□□ -1.34
SPIN3-221ENST00000639418 A0A0D9SG42 100 aa6.64□□□□□ -1.35
SPIN3-221ENST00000639418 KRTAP17-1Q9BYP8 105 aa6.6□□□□□ -1.35
SPIN3-221ENST00000639418 KIAA1109Q2LD37 5005 aa6.59□□□□□ -1.35
SPIN3-221ENST00000639418 MYCBP2O75592 4640 aa6.58□□□□□ -1.36
SPIN3-221ENST00000639418 RYR1P21817 5038 aa6.57□□□□□ -1.36
SPIN3-221ENST00000639418 MT1HL1P0DM35 61 aa6.57□□□□□ -1.36
SPIN3-221ENST00000639418 EPPK1P58107 5090 aaKnown RBP6.54□□□□□ -1.36
SPIN3-221ENST00000639418 KRTAP12-2P59991 146 aa6.47□□□□□ -1.37
SPIN3-221ENST00000639418 LPAP08519 4548 aa6.45□□□□□ -1.38
SPIN3-221ENST00000639418 LCE2DQ5TA82 110 aaPredicted RBP6.44□□□□□ -1.38
SPIN3-221ENST00000639418 KRTAP12-1P59990 96 aa6.42□□□□□ -1.38
SPIN3-221ENST00000639418 LRP2P98164 4655 aa6.39□□□□□ -1.39
SPIN3-221ENST00000639418 M0QZ58 72 aa6.38□□□□□ -1.39
SPIN3-221ENST00000639418 SEC61BP60468 96 aaKnown RBP6.34□□□□□ -1.39
SPIN3-221ENST00000639418 ABCA13Q86UQ4 5058 aa6.33□□□□□ -1.4
SPIN3-221ENST00000639418 KRTAP4-5Q9BYR2 181 aa6.25□□□□□ -1.41
SPIN3-221ENST00000639418 PLAC4Q8WY50 150 aa6.24□□□□□ -1.41
SPIN3-221ENST00000639418 R4GN34 69 aa6.23□□□□□ -1.41
SPIN3-221ENST00000639418 KRTAP4-1Q9BYQ7 146 aa6.14□□□□□ -1.43
SPIN3-221ENST00000639418 LORP23490 312 aaPredicted RBP6.14□□□□□ -1.43
SPIN3-221ENST00000639418 MUC17Q685J3 4493 aa6.13□□□□□ -1.43
SPIN3-221ENST00000639418 HERC2O95714 4834 aa6.13□□□□□ -1.43
SPIN3-221ENST00000639418 KRTAP19-2Q3LHN2 52 aa6.03□□□□□ -1.44
SPIN3-221ENST00000639418 MUC2Q02817 5179 aa5.97□□□□□ -1.45
SPIN3-221ENST00000639418 BIRC6Q9NR09 4857 aa5.97□□□□□ -1.45
SPIN3-221ENST00000639418 CAMK2N1Q7Z7J9 78 aa5.94□□□□□ -1.46
SPIN3-221ENST00000639418 HERC1Q15751 4861 aa5.93□□□□□ -1.46
SPIN3-221ENST00000639418 PCLOQ9Y6V0 5065 aa5.9□□□□□ -1.46
SPIN3-221ENST00000639418 PP632Q6XCG6 107 aa5.84□□□□□ -1.47
SPIN3-221ENST00000639418 PRO2289Q9P1D8 64 aa5.81□□□□□ -1.48
SPIN3-221ENST00000639418 FLGP20930 4061 aaPredicted RBP5.78□□□□□ -1.48
SPIN3-221ENST00000639418 HMCN2Q8NDA2 5059 aa5.76□□□□□ -1.49
SPIN3-221ENST00000639418 TNP1P09430 55 aa5.7□□□□□ -1.5
SPIN3-221ENST00000639418 LCE2CQ5TA81 110 aa5.69□□□□□ -1.5
SPIN3-221ENST00000639418 FAT4Q6V0I7 4981 aa5.69□□□□□ -1.5
SPIN3-221ENST00000639418 LCE2BO14633 110 aa5.67□□□□□ -1.5
SPIN3-221ENST00000639418 LCE2AQ5TA79 106 aaPredicted RBP5.64□□□□□ -1.51
SPIN3-221ENST00000639418 RNF213Q63HN8 5207 aa5.64□□□□□ -1.51
SPIN3-221ENST00000639418 SPRR5A0A1B0GTR4 108 aa5.62□□□□□ -1.51
SPIN3-221ENST00000639418 KRTAP23-1A1A580 65 aa5.62□□□□□ -1.51
SPIN3-221ENST00000639418 UBR4Q5T4S7 5183 aa5.61□□□□□ -1.51
SPIN3-221ENST00000639418 SPRR2GQ9BYE4 73 aa5.59□□□□□ -1.51
SPIN3-221ENST00000639418 KRTAP19-1Q8IUB9 90 aa5.56□□□□□ -1.52
SPIN3-221ENST00000639418 M0R2T5 61 aa5.55□□□□□ -1.52
SPIN3-221ENST00000639418 INE1O15225 51 aa5.54□□□□□ -1.52
SPIN3-221ENST00000639418 MT1HP80294 61 aa5.49□□□□□ -1.53
SPIN3-221ENST00000639418 KRTAP10-10P60014 251 aa5.44□□□□□ -1.54
SPIN3-221ENST00000639418 MT1FP04733 61 aa5.43□□□□□ -1.54
SPIN3-221ENST00000639418 MT2AP02795 61 aa5.43□□□□□ -1.54
SPIN3-221ENST00000639418 LCE3AQ5TA76 89 aa5.4□□□□□ -1.55
SPIN3-221ENST00000639418 KRTAP9-8Q9BYQ0 159 aa5.38□□□□□ -1.55
SPIN3-221ENST00000639418 KRTAP19-8Q3LI54 63 aa5.33□□□□□ -1.56
SPIN3-221ENST00000639418 MT1BP07438 61 aa5.26□□□□□ -1.57
SPIN3-221ENST00000639418 KRTAP10-5P60370 271 aa5.26□□□□□ -1.57
SPIN3-221ENST00000639418 KRTAP8-1Q8IUC2 63 aa5.25□□□□□ -1.57
SPIN3-221ENST00000639418 MT1XP80297 61 aa5.24□□□□□ -1.57
SPIN3-221ENST00000639418 KRTAP10-12P60413 245 aa5.17□□□□□ -1.58
SPIN3-221ENST00000639418 KRTAP9-3Q9BYQ3 159 aa5.14□□□□□ -1.59
SPIN3-221ENST00000639418 KRTAP12-3P60328 96 aa5.14□□□□□ -1.59
SPIN3-221ENST00000639418 KRTAP10-7P60409 375 aaPredicted RBP5.11□□□□□ -1.59
SPIN3-221ENST00000639418 USH2AO75445 5202 aa4.98□□□□□ -1.61
SPIN3-221ENST00000639418 KRTAP19-5Q3LI72 72 aa4.9□□□□□ -1.62
SPIN3-221ENST00000639418 LCE3CQ5T5A8 94 aa4.84□□□□□ -1.63
SPIN3-221ENST00000639418 KMT2DO14686 5537 aa4.78□□□□□ -1.64
SPIN3-221ENST00000639418 KRTAP4-8A0A0G2JLE6 195 aa4.78□□□□□ -1.64
SPIN3-221ENST00000639418 KRTAP4-8Q9BYQ9 185 aa4.78□□□□□ -1.64
SPIN3-221ENST00000639418 FSIP2Q5CZC0 6907 aa4.67□□□□□ -1.66
SPIN3-221ENST00000639418 KRTAP19-7Q3SYF9 63 aa4.67□□□□□ -1.66
SPIN3-221ENST00000639418 KRTAP9-6A8MVA2 160 aa4.66□□□□□ -1.66
SPIN3-221ENST00000639418 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
SPIN3-221ENST00000639418 SSPOA2VEC9 5147 aa4.58□□□□□ -1.68
SPIN3-221ENST00000639418 LOC100996750A0A140TA64 210 aa4.55□□□□□ -1.68
SPIN3-221ENST00000639418 KRTAP4-6Q9BYQ5 205 aa4.55□□□□□ -1.68
SPIN3-221ENST00000639418 MT1LQ93083 61 aa4.54□□□□□ -1.68
SPIN3-221ENST00000639418 KRTAP19-4Q3LI73 84 aa4.54□□□□□ -1.68
SPIN3-221ENST00000639418 MT1EP04732 61 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms