RNA–Protein interactions for RNA: ENST00000639038.1

NECAP1-214, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,423 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-214ENST00000639038 DEFB105AQ8NG35 78 aa4.69□□□□□ -1.66
NECAP1-214ENST00000639038 SPINK6Q6UWN8 80 aa4.68□□□□□ -1.66
NECAP1-214ENST00000639038 BIRC6Q9NR09 4857 aa4.67□□□□□ -1.66
NECAP1-214ENST00000639038 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.67□□□□□ -1.66
NECAP1-214ENST00000639038 SRRM2Q9UQ35 2752 aaKnown RBP4.67□□□□□ -1.66
NECAP1-214ENST00000639038 KIAA1109Q2LD37 5005 aa4.67□□□□□ -1.66
NECAP1-214ENST00000639038 A0A0G2JQZ4 141 aa4.66□□□□□ -1.66
NECAP1-214ENST00000639038 Q5VSD8 79 aa4.66□□□□□ -1.66
NECAP1-214ENST00000639038 DSCR10P59022 87 aa4.64□□□□□ -1.67
NECAP1-214ENST00000639038 KRTAP9-8Q9BYQ0 159 aa4.64□□□□□ -1.67
NECAP1-214ENST00000639038 KRTAP1-4P0C5Y4 121 aa4.64□□□□□ -1.67
NECAP1-214ENST00000639038 KRTAP9-2Q9BYQ4 174 aa4.64□□□□□ -1.67
NECAP1-214ENST00000639038 TPRXLQ17RH7 258 aa4.63□□□□□ -1.67
NECAP1-214ENST00000639038 KRTAP9-6A0A140TA67 174 aa4.62□□□□□ -1.67
NECAP1-214ENST00000639038 ANAPC11Q9NYG5 84 aa4.62□□□□□ -1.67
NECAP1-214ENST00000639038 K7EQZ3 153 aa4.62□□□□□ -1.67
NECAP1-214ENST00000639038 KRTAP4-12Q9BQ66 201 aa4.61□□□□□ -1.67
NECAP1-214ENST00000639038 KRTAP4-8A0A0G2JLE6 195 aa4.6□□□□□ -1.67
NECAP1-214ENST00000639038 HERC2O95714 4834 aa4.59□□□□□ -1.67
NECAP1-214ENST00000639038 KRTAP29-1A8MX34 341 aaPredicted RBP4.58□□□□□ -1.68
NECAP1-214ENST00000639038 KRTAP13-2Q52LG2 175 aa4.58□□□□□ -1.68
NECAP1-214ENST00000639038 KRTAP5-3Q6L8H2 238 aa4.58□□□□□ -1.68
NECAP1-214ENST00000639038 IGFL1Q6UW32 110 aa4.58□□□□□ -1.68
NECAP1-214ENST00000639038 CRIPTQ9P021 101 aa4.57□□□□□ -1.68
NECAP1-214ENST00000639038 KRTAP3-1Q9BYR8 98 aa4.57□□□□□ -1.68
NECAP1-214ENST00000639038 PCOTHQ58A44 107 aa4.56□□□□□ -1.68
NECAP1-214ENST00000639038 FAT3Q8TDW7 4589 aa4.55□□□□□ -1.68
NECAP1-214ENST00000639038 KRTAP4-5Q9BYR2 181 aa4.55□□□□□ -1.68
NECAP1-214ENST00000639038 WFDC13Q8IUB5 93 aa4.54□□□□□ -1.68
NECAP1-214ENST00000639038 LCE3BQ5TA77 95 aa4.53□□□□□ -1.68
NECAP1-214ENST00000639038 KRTAP19-1Q8IUB9 90 aa4.53□□□□□ -1.68
NECAP1-214ENST00000639038 KRTAP10-8P60410 259 aa4.53□□□□□ -1.68
NECAP1-214ENST00000639038 KRTAP4-7Q9BYR0 210 aa4.52□□□□□ -1.69
NECAP1-214ENST00000639038 TNXBP22105 4242 aa4.52□□□□□ -1.69
NECAP1-214ENST00000639038 LRP1Q07954 4544 aaKnown RBP4.51□□□□□ -1.69
NECAP1-214ENST00000639038 FLG2Q5D862 2391 aaPredicted RBP4.49□□□□□ -1.69
NECAP1-214ENST00000639038 SPINK1P00995 79 aa4.48□□□□□ -1.69
NECAP1-214ENST00000639038 RPS29P62273 56 aaKnown RBP4.48□□□□□ -1.69
NECAP1-214ENST00000639038 ABCA13Q86UQ4 5058 aa4.48□□□□□ -1.69
NECAP1-214ENST00000639038 MT1HL1P0DM35 61 aa4.48□□□□□ -1.69
NECAP1-214ENST00000639038 TP53AIP1Q9HCN2 124 aa4.47□□□□□ -1.69
NECAP1-214ENST00000639038 MYCBP2O75592 4640 aa4.47□□□□□ -1.69
NECAP1-214ENST00000639038 KRTAP19-4Q3LI73 84 aa4.43□□□□□ -1.7
NECAP1-214ENST00000639038 PLAC4Q8WY50 150 aa4.41□□□□□ -1.7
NECAP1-214ENST00000639038 KRTAP9-9Q9BYP9 154 aa4.4□□□□□ -1.7
NECAP1-214ENST00000639038 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.7
NECAP1-214ENST00000639038 DMBT1Q9UGM3 2413 aaPredicted RBP4.39□□□□□ -1.71
NECAP1-214ENST00000639038 INE1O15225 51 aa4.39□□□□□ -1.71
NECAP1-214ENST00000639038 H0YAA0 97 aa4.38□□□□□ -1.71
NECAP1-214ENST00000639038 PCLOQ9Y6V0 5065 aa4.36□□□□□ -1.71
NECAP1-214ENST00000639038 MMP24-AS1A0A0U1RRL7 71 aa4.3□□□□□ -1.72
NECAP1-214ENST00000639038 KRTAP4-2Q9BYR5 136 aa4.3□□□□□ -1.72
NECAP1-214ENST00000639038 MRPL34Q9BQ48 92 aaKnown RBP4.28□□□□□ -1.72
NECAP1-214ENST00000639038 KRTAP13-3Q3SY46 172 aa4.27□□□□□ -1.73
NECAP1-214ENST00000639038 LCE1DQ5T752 114 aa4.27□□□□□ -1.73
NECAP1-214ENST00000639038 C10orf95Q9H7T3 257 aa4.27□□□□□ -1.73
NECAP1-214ENST00000639038 C9orf92A6NGG3 77 aa4.25□□□□□ -1.73
NECAP1-214ENST00000639038 HERC1Q15751 4861 aa4.23□□□□□ -1.73
NECAP1-214ENST00000639038 KRTAP4-9Q9BYQ8 210 aa4.2□□□□□ -1.74
NECAP1-214ENST00000639038 HMCN2Q8NDA2 5059 aa4.2□□□□□ -1.74
NECAP1-214ENST00000639038 COX6B2Q6YFQ2 88 aa4.19□□□□□ -1.74
NECAP1-214ENST00000639038 IGKV2-30P06310 120 aa4.18□□□□□ -1.74
NECAP1-214ENST00000639038 RPL37P61927 97 aaKnown RBP4.18□□□□□ -1.74
NECAP1-214ENST00000639038 LPAP08519 4548 aa4.18□□□□□ -1.74
NECAP1-214ENST00000639038 H1FX-AS1Q4G0G2 97 aa4.16□□□□□ -1.74
NECAP1-214ENST00000639038 KRTAP12-2P59991 146 aa4.15□□□□□ -1.74
NECAP1-214ENST00000639038 LRP2P98164 4655 aa4.15□□□□□ -1.75
NECAP1-214ENST00000639038 MUC17Q685J3 4493 aa4.13□□□□□ -1.75
NECAP1-214ENST00000639038 LCE4AQ5TA78 99 aa4.13□□□□□ -1.75
NECAP1-214ENST00000639038 KRTAP9-7A8MTY7 169 aa4.11□□□□□ -1.75
NECAP1-214ENST00000639038 PP632Q6XCG6 107 aa4.06□□□□□ -1.76
NECAP1-214ENST00000639038 IGKV2D-30A0A075B6S6 120 aa4.05□□□□□ -1.76
NECAP1-214ENST00000639038 KRTAP4-1Q9BYQ7 146 aa4.02□□□□□ -1.77
NECAP1-214ENST00000639038 LCE5AQ5TCM9 118 aa4.01□□□□□ -1.77
NECAP1-214ENST00000639038 KRTAP9-3Q9BYQ3 159 aa3.99□□□□□ -1.77
NECAP1-214ENST00000639038 KRTAP4-11Q9BYQ6 195 aa3.99□□□□□ -1.77
NECAP1-214ENST00000639038 RNF213Q63HN8 5207 aa3.94□□□□□ -1.78
NECAP1-214ENST00000639038 UBR4Q5T4S7 5183 aa3.94□□□□□ -1.78
NECAP1-214ENST00000639038 KRTAP19-2Q3LHN2 52 aa3.91□□□□□ -1.78
NECAP1-214ENST00000639038 MUC2Q02817 5179 aa3.88□□□□□ -1.79
NECAP1-214ENST00000639038 FLGP20930 4061 aaPredicted RBP3.85□□□□□ -1.79
NECAP1-214ENST00000639038 SPRR5A0A1B0GTR4 108 aa3.84□□□□□ -1.8
NECAP1-214ENST00000639038 FAT4Q6V0I7 4981 aa3.83□□□□□ -1.8
NECAP1-214ENST00000639038 S4R3F8 94 aa3.83□□□□□ -1.8
NECAP1-214ENST00000639038 MT1HP80294 61 aa3.78□□□□□ -1.81
NECAP1-214ENST00000639038 KRTAP13-4Q3LI77 160 aa3.73□□□□□ -1.81
NECAP1-214ENST00000639038 KRTAP2-2Q9BYT5 123 aa3.73□□□□□ -1.81
NECAP1-214ENST00000639038 A0A0D9SG42 100 aa3.71□□□□□ -1.82
NECAP1-214ENST00000639038 M0R2T5 61 aa3.7□□□□□ -1.82
NECAP1-214ENST00000639038 KRTAP10-6P60371 365 aaPredicted RBP3.65□□□□□ -1.82
NECAP1-214ENST00000639038 MT2AP02795 61 aa3.61□□□□□ -1.83
NECAP1-214ENST00000639038 KRTAP12-1P59990 96 aa3.6□□□□□ -1.83
NECAP1-214ENST00000639038 MT1FP04733 61 aa3.58□□□□□ -1.84
NECAP1-214ENST00000639038 KRTAP10-10P60014 251 aa3.56□□□□□ -1.84
NECAP1-214ENST00000639038 M0QZ58 72 aa3.52□□□□□ -1.85
NECAP1-214ENST00000639038 SPRR2GQ9BYE4 73 aa3.5□□□□□ -1.85
NECAP1-214ENST00000639038 KRTAP19-8Q3LI54 63 aa3.43□□□□□ -1.86
NECAP1-214ENST00000639038 LCE1FQ5T754 118 aa3.4□□□□□ -1.86
NECAP1-214ENST00000639038 MT1BP07438 61 aa3.38□□□□□ -1.87
NECAP1-214ENST00000639038 USH2AO75445 5202 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms