RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 FCGBPQ9Y6R7 5405 aaPredicted RBP7.84□□□□□ -1.15
COLCA2-206ENST00000638573 H3BPC8 53 aa7.83□□□□□ -1.16
COLCA2-206ENST00000638573 KRTAP3-1Q9BYR8 98 aa7.83□□□□□ -1.16
COLCA2-206ENST00000638573 S4R3F8 94 aa7.82□□□□□ -1.16
COLCA2-206ENST00000638573 SMIM20Q8N5G0 67 aa7.81□□□□□ -1.16
COLCA2-206ENST00000638573 KLKP1Q107X0 134 aa7.76□□□□□ -1.17
COLCA2-206ENST00000638573 TRAV7A0A075B6U4 112 aa7.75□□□□□ -1.17
COLCA2-206ENST00000638573 A8MUN3 132 aa7.73□□□□□ -1.17
COLCA2-206ENST00000638573 LCA10Q71F78 164 aa7.73□□□□□ -1.17
COLCA2-206ENST00000638573 CSAG1Q6PB30 78 aa7.72□□□□□ -1.17
COLCA2-206ENST00000638573 KRTAP19-6Q3LI70 58 aa7.68□□□□□ -1.18
COLCA2-206ENST00000638573 NDUFC1O43677 76 aa7.62□□□□□ -1.19
COLCA2-206ENST00000638573 SERP2Q8N6R1 65 aa7.6□□□□□ -1.19
COLCA2-206ENST00000638573 DMAC1Q96GE9 116 aa7.58□□□□□ -1.2
COLCA2-206ENST00000638573 SNURFQ9Y675 71 aa7.56□□□□□ -1.2
COLCA2-206ENST00000638573 C20orf197Q8N268 126 aa7.55□□□□□ -1.2
COLCA2-206ENST00000638573 MACF1Q9UPN3 7388 aaKnown RBP7.5□□□□□ -1.21
COLCA2-206ENST00000638573 ACYP2P14621 99 aa7.48□□□□□ -1.21
COLCA2-206ENST00000638573 COX7CP15954 63 aa7.45□□□□□ -1.22
COLCA2-206ENST00000638573 SYNE2Q8WXH0 6885 aaKnown RBP7.44□□□□□ -1.22
COLCA2-206ENST00000638573 H0YAA0 97 aa7.44□□□□□ -1.22
COLCA2-206ENST00000638573 SPANXA2-OT1Q8N9U9 137 aa7.43□□□□□ -1.22
COLCA2-206ENST00000638573 MT1BP07438 61 aa7.42□□□□□ -1.22
COLCA2-206ENST00000638573 CHKB-CPT1BH3BT56 60 aa7.39□□□□□ -1.23
COLCA2-206ENST00000638573 ADM2Q7Z4H4 148 aa7.38□□□□□ -1.23
COLCA2-206ENST00000638573 SPTSSBQ8NFR3 76 aa7.38□□□□□ -1.23
COLCA2-206ENST00000638573 ANAPC13Q9BS18 74 aa7.37□□□□□ -1.23
COLCA2-206ENST00000638573 CRIPTQ9P021 101 aa7.37□□□□□ -1.23
COLCA2-206ENST00000638573 KRTAP6-3Q3LI67 103 aa7.34□□□□□ -1.23
COLCA2-206ENST00000638573 SPRR2GQ9BYE4 73 aa7.32□□□□□ -1.24
COLCA2-206ENST00000638573 KRTAP19-8Q3LI54 63 aa7.31□□□□□ -1.24
COLCA2-206ENST00000638573 A6NN06 94 aa7.29□□□□□ -1.24
COLCA2-206ENST00000638573 Q5VV11 94 aa7.29□□□□□ -1.24
COLCA2-206ENST00000638573 H7BZZ5 65 aa7.25□□□□□ -1.25
COLCA2-206ENST00000638573 CYSTM1Q9H1C7 97 aa7.22□□□□□ -1.25
COLCA2-206ENST00000638573 KRTAP10-5P60370 271 aa7.21□□□□□ -1.26
COLCA2-206ENST00000638573 COA5Q86WW8 74 aa7.21□□□□□ -1.26
COLCA2-206ENST00000638573 P0C880 135 aa7.2□□□□□ -1.26
COLCA2-206ENST00000638573 R4GN34 69 aa7.2□□□□□ -1.26
COLCA2-206ENST00000638573 CCDC179H3BU77 68 aa7.17□□□□□ -1.26
COLCA2-206ENST00000638573 M0QZ58 72 aa7.14□□□□□ -1.27
COLCA2-206ENST00000638573 ATP5EP56381 51 aaPredicted RBP7.07□□□□□ -1.28
COLCA2-206ENST00000638573 SEC61GP60059 68 aa7.04□□□□□ -1.28
COLCA2-206ENST00000638573 LINC01554Q52M75 96 aa7.03□□□□□ -1.28
COLCA2-206ENST00000638573 PLAC4Q8WY50 150 aa7.02□□□□□ -1.29
COLCA2-206ENST00000638573 NEBP20929 6669 aa7□□□□□ -1.29
COLCA2-206ENST00000638573 SERP1Q9Y6X1 66 aa7□□□□□ -1.29
COLCA2-206ENST00000638573 MUC12Q9UKN1 5478 aa6.98□□□□□ -1.29
COLCA2-206ENST00000638573 KRTAP5-9P26371 169 aa6.97□□□□□ -1.29
COLCA2-206ENST00000638573 TMEM258P61165 79 aa6.97□□□□□ -1.29
COLCA2-206ENST00000638573 MT1XP80297 61 aa6.92□□□□□ -1.3
COLCA2-206ENST00000638573 PRO2289Q9P1D8 64 aa6.91□□□□□ -1.3
COLCA2-206ENST00000638573 KMT2DO14686 5537 aa6.89□□□□□ -1.31
COLCA2-206ENST00000638573 A0A1B0GU69 56 aa6.87□□□□□ -1.31
COLCA2-206ENST00000638573 KRTAP20-1Q3LI63 56 aa6.87□□□□□ -1.31
COLCA2-206ENST00000638573 A0A1B0GU33 70 aa6.83□□□□□ -1.32
COLCA2-206ENST00000638573 KRTAP13-4Q3LI77 160 aa6.83□□□□□ -1.32
COLCA2-206ENST00000638573 MDN1Q9NU22 5596 aa6.8□□□□□ -1.32
COLCA2-206ENST00000638573 SPRR2FQ96RM1 72 aa6.79□□□□□ -1.32
COLCA2-206ENST00000638573 PRR15LQ9BU68 103 aa6.78□□□□□ -1.32
COLCA2-206ENST00000638573 LOC100996750A0A140TA64 210 aa6.76□□□□□ -1.33
COLCA2-206ENST00000638573 KRTAP4-6Q9BYQ5 205 aa6.76□□□□□ -1.33
COLCA2-206ENST00000638573 SPATA8Q6RVD6 105 aa6.75□□□□□ -1.33
COLCA2-206ENST00000638573 A0A0D9SG42 100 aa6.73□□□□□ -1.33
COLCA2-206ENST00000638573 KRTAP4-8A0A0G2JLE6 195 aa6.72□□□□□ -1.33
COLCA2-206ENST00000638573 SPRR2EP22531 72 aa6.72□□□□□ -1.33
COLCA2-206ENST00000638573 SPRR2BP35325 72 aa6.72□□□□□ -1.33
COLCA2-206ENST00000638573 SPRR2AP35326 72 aa6.72□□□□□ -1.33
COLCA2-206ENST00000638573 KRTAP4-8Q9BYQ9 185 aa6.72□□□□□ -1.33
COLCA2-206ENST00000638573 LINC01558Q9Y6Z2 57 aa6.71□□□□□ -1.34
COLCA2-206ENST00000638573 KRTAP8-1Q8IUC2 63 aa6.7□□□□□ -1.34
COLCA2-206ENST00000638573 CAMK2N1Q7Z7J9 78 aa6.69□□□□□ -1.34
COLCA2-206ENST00000638573 SMIM26A0A096LP01 95 aa6.67□□□□□ -1.34
COLCA2-206ENST00000638573 PCP4P48539 62 aa6.65□□□□□ -1.34
COLCA2-206ENST00000638573 KRTAP12-2P59991 146 aa6.65□□□□□ -1.34
COLCA2-206ENST00000638573 KRTAP10-7P60409 375 aaPredicted RBP6.64□□□□□ -1.35
COLCA2-206ENST00000638573 LCE1AQ5T7P2 110 aa6.63□□□□□ -1.35
COLCA2-206ENST00000638573 SPINT4Q6UDR6 99 aa6.63□□□□□ -1.35
COLCA2-206ENST00000638573 KRTAP2-3P0C7H8 128 aa6.62□□□□□ -1.35
COLCA2-206ENST00000638573 KRTAP2-4Q9BYR9 128 aa6.62□□□□□ -1.35
COLCA2-206ENST00000638573 V9GYY9 64 aa6.56□□□□□ -1.36
COLCA2-206ENST00000638573 A8MU10 97 aa6.55□□□□□ -1.36
COLCA2-206ENST00000638573 KRTAP12-1P59990 96 aa6.55□□□□□ -1.36
COLCA2-206ENST00000638573 UQCR11O14957 56 aa6.53□□□□□ -1.36
COLCA2-206ENST00000638573 KRTAP10-12P60413 245 aa6.51□□□□□ -1.37
COLCA2-206ENST00000638573 SPRR2DP22532 72 aa6.47□□□□□ -1.37
COLCA2-206ENST00000638573 Q1T7F1 81 aa6.47□□□□□ -1.37
COLCA2-206ENST00000638573 PSPHP1O15172 72 aa6.44□□□□□ -1.38
COLCA2-206ENST00000638573 KRTAP2-2Q9BYT5 123 aa6.41□□□□□ -1.38
COLCA2-206ENST00000638573 KRTAP2-1Q9BYU5 128 aa6.41□□□□□ -1.38
COLCA2-206ENST00000638573 RPS28P62857 69 aaKnown RBP6.4□□□□□ -1.38
COLCA2-206ENST00000638573 MIR22HGQ0VDD5 57 aa6.4□□□□□ -1.38
COLCA2-206ENST00000638573 LCE3BQ5TA77 95 aa6.3□□□□□ -1.4
COLCA2-206ENST00000638573 K7ERS5 55 aa6.29□□□□□ -1.4
COLCA2-206ENST00000638573 A6NED7 52 aa6.28□□□□□ -1.4
COLCA2-206ENST00000638573 TNP1P09430 55 aa6.23□□□□□ -1.41
COLCA2-206ENST00000638573 C10orf95Q9H7T3 257 aa6.22□□□□□ -1.41
COLCA2-206ENST00000638573 KRTAP19-7Q3SYF9 63 aa6.19□□□□□ -1.42
COLCA2-206ENST00000638573 MT1EP04732 61 aa6.12□□□□□ -1.43
COLCA2-206ENST00000638573 KRTAP4-12Q9BQ66 201 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms