RNA–Protein interactions for RNA: ENST00000636400.2

TCF4-278, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,343 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-278ENST00000636400 MT1HL1P0DM35 61 aa3.15□□□□□ -1.91
TCF4-278ENST00000636400 KRTAP23-1A1A580 65 aa3.13□□□□□ -1.91
TCF4-278ENST00000636400 KRTAP15-1Q3LI76 137 aa3.12□□□□□ -1.91
TCF4-278ENST00000636400 DNAH6Q9C0G6 4158 aa3.1□□□□□ -1.91
TCF4-278ENST00000636400 KRTAP10-4P60372 401 aaPredicted RBP3.09□□□□□ -1.91
TCF4-278ENST00000636400 PRKDCP78527 4128 aaKnown RBP3.09□□□□□ -1.92
TCF4-278ENST00000636400 DNAH2Q9P225 4427 aa3.08□□□□□ -1.92
TCF4-278ENST00000636400 KRTAP10-12P60413 245 aa3.07□□□□□ -1.92
TCF4-278ENST00000636400 KRTAP3-3Q9BYR6 98 aa3.06□□□□□ -1.92
TCF4-278ENST00000636400 INE1O15225 51 aa3.05□□□□□ -1.92
TCF4-278ENST00000636400 FRAS1Q86XX4 4008 aa3.05□□□□□ -1.92
TCF4-278ENST00000636400 KRTAP3-2Q9BYR7 98 aa3.04□□□□□ -1.92
TCF4-278ENST00000636400 DNAH9Q9NYC9 4486 aa2.98□□□□□ -1.93
TCF4-278ENST00000636400 KRTAP12-3P60328 96 aa2.95□□□□□ -1.94
TCF4-278ENST00000636400 FAT2Q9NYQ8 4349 aa2.92□□□□□ -1.94
TCF4-278ENST00000636400 KRTAP4-5Q9BYR2 181 aa2.91□□□□□ -1.94
TCF4-278ENST00000636400 DYNC2H1Q8NCM8 4307 aaKnown RBP2.9□□□□□ -1.95
TCF4-278ENST00000636400 DNAH10Q8IVF4 4471 aa2.89□□□□□ -1.95
TCF4-278ENST00000636400 VPS13DQ5THJ4 4388 aa2.85□□□□□ -1.95
TCF4-278ENST00000636400 STARD9Q9P2P6 4700 aa2.83□□□□□ -1.96
TCF4-278ENST00000636400 LCE3AQ5TA76 89 aa2.83□□□□□ -1.96
TCF4-278ENST00000636400 KRTAP19-4Q3LI73 84 aa2.82□□□□□ -1.96
TCF4-278ENST00000636400 SPRR2GQ9BYE4 73 aa2.81□□□□□ -1.96
TCF4-278ENST00000636400 KRTAP8-1Q8IUC2 63 aa2.81□□□□□ -1.96
TCF4-278ENST00000636400 RYR1P21817 5038 aa2.8□□□□□ -1.96
TCF4-278ENST00000636400 PKHD1P08F94 4074 aa2.79□□□□□ -1.96
TCF4-278ENST00000636400 FLGP20930 4061 aaPredicted RBP2.79□□□□□ -1.96
TCF4-278ENST00000636400 PLECQ15149 4684 aaKnown RBP2.79□□□□□ -1.96
TCF4-278ENST00000636400 DNAH11Q96DT5 4516 aa2.77□□□□□ -1.97
TCF4-278ENST00000636400 CRCT1Q9UGL9 99 aa2.76□□□□□ -1.97
TCF4-278ENST00000636400 MT1HP80294 61 aa2.74□□□□□ -1.97
TCF4-278ENST00000636400 LORP23490 312 aaPredicted RBP2.73□□□□□ -1.97
TCF4-278ENST00000636400 DNAH5Q8TE73 4624 aa2.72□□□□□ -1.97
TCF4-278ENST00000636400 DNAH17Q9UFH2 4485 aa2.7□□□□□ -1.98
TCF4-278ENST00000636400 MT2AP02795 61 aa2.68□□□□□ -1.98
TCF4-278ENST00000636400 KRTAP4-1Q9BYQ7 146 aa2.67□□□□□ -1.98
TCF4-278ENST00000636400 PKHD1L1Q86WI1 4243 aa2.67□□□□□ -1.98
TCF4-278ENST00000636400 DNAH8Q96JB1 4490 aa2.67□□□□□ -1.98
TCF4-278ENST00000636400 LRP1BQ9NZR2 4599 aa2.64□□□□□ -1.99
TCF4-278ENST00000636400 KRTAP10-7P60409 375 aaPredicted RBP2.64□□□□□ -1.99
TCF4-278ENST00000636400 KRTAP10-5P60370 271 aa2.63□□□□□ -1.99
TCF4-278ENST00000636400 LCE3CQ5T5A8 94 aa2.6□□□□□ -1.99
TCF4-278ENST00000636400 MT1FP04733 61 aa2.6□□□□□ -1.99
TCF4-278ENST00000636400 KRTAP19-8Q3LI54 63 aa2.57□□□□□ -2
TCF4-278ENST00000636400 SPRR2FQ96RM1 72 aa2.57□□□□□ -2
TCF4-278ENST00000636400 KRTAP19-5Q3LI72 72 aa2.56□□□□□ -2
TCF4-278ENST00000636400 PKD1P98161 4303 aa2.56□□□□□ -2
TCF4-278ENST00000636400 TNXBP22105 4242 aa2.55□□□□□ -2
TCF4-278ENST00000636400 DYNC1H1Q14204 4646 aaKnown RBP2.53□□□□□ -2
TCF4-278ENST00000636400 APOBP04114 4563 aaKnown RBP2.51□□□□□ -2.01
TCF4-278ENST00000636400 KRTAP19-1Q8IUB9 90 aa2.5□□□□□ -2.01
TCF4-278ENST00000636400 KRTAP17-1Q9BYP8 105 aa2.49□□□□□ -2.01
TCF4-278ENST00000636400 SACSQ9NZJ4 4579 aa2.49□□□□□ -2.01
TCF4-278ENST00000636400 LRP1Q07954 4544 aaKnown RBP2.49□□□□□ -2.01
TCF4-278ENST00000636400 DNHD1Q96M86 4753 aa2.48□□□□□ -2.01
TCF4-278ENST00000636400 FAT1Q14517 4588 aa2.47□□□□□ -2.01
TCF4-278ENST00000636400 HSPG2P98160 4391 aa2.47□□□□□ -2.01
TCF4-278ENST00000636400 LCE2DQ5TA82 110 aaPredicted RBP2.46□□□□□ -2.02
TCF4-278ENST00000636400 FAT3Q8TDW7 4589 aa2.45□□□□□ -2.02
TCF4-278ENST00000636400 MT1XP80297 61 aa2.44□□□□□ -2.02
TCF4-278ENST00000636400 MYCBP2O75592 4640 aa2.44□□□□□ -2.02
TCF4-278ENST00000636400 KRTAP9-8Q9BYQ0 159 aa2.42□□□□□ -2.02
TCF4-278ENST00000636400 SPRR2EP22531 72 aa2.41□□□□□ -2.02
TCF4-278ENST00000636400 SPRR2BP35325 72 aa2.41□□□□□ -2.02
TCF4-278ENST00000636400 SPRR2AP35326 72 aa2.41□□□□□ -2.02
TCF4-278ENST00000636400 KRTAP12-4P60329 112 aa2.4□□□□□ -2.03
TCF4-278ENST00000636400 LCE2BO14633 110 aa2.4□□□□□ -2.03
TCF4-278ENST00000636400 MT1GP13640 62 aa2.39□□□□□ -2.03
TCF4-278ENST00000636400 MT1BP07438 61 aa2.36□□□□□ -2.03
TCF4-278ENST00000636400 SPRR5A0A1B0GTR4 108 aa2.36□□□□□ -2.03
TCF4-278ENST00000636400 SPRR2DP22532 72 aa2.36□□□□□ -2.03
TCF4-278ENST00000636400 KRTAP9-3Q9BYQ3 159 aa2.36□□□□□ -2.03
TCF4-278ENST00000636400 LCE2CQ5TA81 110 aa2.34□□□□□ -2.04
TCF4-278ENST00000636400 LCE3BQ5TA77 95 aa2.31□□□□□ -2.04
TCF4-278ENST00000636400 LRP2P98164 4655 aa2.3□□□□□ -2.04
TCF4-278ENST00000636400 MT1LQ93083 61 aa2.3□□□□□ -2.04
TCF4-278ENST00000636400 RYR3Q15413 4870 aa2.29□□□□□ -2.04
TCF4-278ENST00000636400 KRTAP19-3Q7Z4W3 81 aa2.28□□□□□ -2.04
TCF4-278ENST00000636400 PCLOQ9Y6V0 5065 aa2.27□□□□□ -2.05
TCF4-278ENST00000636400 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
TCF4-278ENST00000636400 LPAP08519 4548 aa2.23□□□□□ -2.05
TCF4-278ENST00000636400 KRTAP19-2Q3LHN2 52 aa2.23□□□□□ -2.05
TCF4-278ENST00000636400 MT1EP04732 61 aa2.22□□□□□ -2.05
TCF4-278ENST00000636400 KRTAP19-6Q3LI70 58 aa2.21□□□□□ -2.05
TCF4-278ENST00000636400 KRTAP4-8A0A0G2JLE6 195 aa2.21□□□□□ -2.06
TCF4-278ENST00000636400 LCE3EQ5T5B0 92 aa2.21□□□□□ -2.06
TCF4-278ENST00000636400 KRTAP4-8Q9BYQ9 185 aa2.21□□□□□ -2.06
TCF4-278ENST00000636400 RYR2Q92736 4967 aa2.18□□□□□ -2.06
TCF4-278ENST00000636400 HYDINQ4G0P3 5121 aa2.14□□□□□ -2.07
TCF4-278ENST00000636400 MT1MQ8N339 61 aa2.14□□□□□ -2.07
TCF4-278ENST00000636400 MT3P25713 68 aa2.13□□□□□ -2.07
TCF4-278ENST00000636400 MUC17Q685J3 4493 aa2.12□□□□□ -2.07
TCF4-278ENST00000636400 KRTAP9-2Q9BYQ4 174 aa2.12□□□□□ -2.07
TCF4-278ENST00000636400 KIAA1109Q2LD37 5005 aa2.1□□□□□ -2.07
TCF4-278ENST00000636400 KMT2CQ8NEZ4 4911 aaKnown RBP2.09□□□□□ -2.08
TCF4-278ENST00000636400 LCE2AQ5TA79 106 aaPredicted RBP2.08□□□□□ -2.08
TCF4-278ENST00000636400 HERC2O95714 4834 aa2.07□□□□□ -2.08
TCF4-278ENST00000636400 MT4P47944 62 aa2.05□□□□□ -2.08
TCF4-278ENST00000636400 LCE1AQ5T7P2 110 aa2.04□□□□□ -2.08
TCF4-278ENST00000636400 BIRC6Q9NR09 4857 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms