RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 DNAH9Q9NYC9 4486 aa2.93□□□□□ -1.94
CHD2-221ENST00000635856 KRTAP3-3Q9BYR6 98 aa2.92□□□□□ -1.94
CHD2-221ENST00000635856 STARD9Q9P2P6 4700 aa2.92□□□□□ -1.94
CHD2-221ENST00000635856 M0R2T5 61 aa2.92□□□□□ -1.94
CHD2-221ENST00000635856 A0A1B0GVY2 172 aa2.91□□□□□ -1.94
CHD2-221ENST00000635856 DNAH7Q8WXX0 4024 aa2.91□□□□□ -1.94
CHD2-221ENST00000635856 RYR1P21817 5038 aa2.91□□□□□ -1.94
CHD2-221ENST00000635856 KMT2AQ03164 3969 aa2.9□□□□□ -1.94
CHD2-221ENST00000635856 HUWE1Q7Z6Z7 4374 aaKnown RBP2.9□□□□□ -1.95
CHD2-221ENST00000635856 KRTAP1-4P0C5Y4 121 aa2.89□□□□□ -1.95
CHD2-221ENST00000635856 PLECQ15149 4684 aaKnown RBP2.87□□□□□ -1.95
CHD2-221ENST00000635856 TNP1P09430 55 aa2.87□□□□□ -1.95
CHD2-221ENST00000635856 KIAA1109Q2LD37 5005 aa2.87□□□□□ -1.95
CHD2-221ENST00000635856 SACSQ9NZJ4 4579 aa2.87□□□□□ -1.95
CHD2-221ENST00000635856 DNAH1Q9P2D7 4330 aa2.85□□□□□ -1.95
CHD2-221ENST00000635856 RYR2Q92736 4967 aa2.84□□□□□ -1.96
CHD2-221ENST00000635856 DNAH3Q8TD57 4116 aa2.83□□□□□ -1.96
CHD2-221ENST00000635856 PCLOQ9Y6V0 5065 aa2.83□□□□□ -1.96
CHD2-221ENST00000635856 PKHD1P08F94 4074 aa2.83□□□□□ -1.96
CHD2-221ENST00000635856 SPRR5A0A1B0GTR4 108 aa2.79□□□□□ -1.96
CHD2-221ENST00000635856 VPS13DQ5THJ4 4388 aa2.78□□□□□ -1.96
CHD2-221ENST00000635856 DNAH10Q8IVF4 4471 aa2.77□□□□□ -1.97
CHD2-221ENST00000635856 HERC1Q15751 4861 aa2.76□□□□□ -1.97
CHD2-221ENST00000635856 BIRC6Q9NR09 4857 aa2.75□□□□□ -1.97
CHD2-221ENST00000635856 KRTAP17-1Q9BYP8 105 aa2.74□□□□□ -1.97
CHD2-221ENST00000635856 MYCBP2O75592 4640 aa2.74□□□□□ -1.97
CHD2-221ENST00000635856 DNAH2Q9P225 4427 aa2.73□□□□□ -1.97
CHD2-221ENST00000635856 ABCA13Q86UQ4 5058 aa2.73□□□□□ -1.97
CHD2-221ENST00000635856 FAT1Q14517 4588 aa2.73□□□□□ -1.97
CHD2-221ENST00000635856 HERC2O95714 4834 aa2.72□□□□□ -1.97
CHD2-221ENST00000635856 DNAH6Q9C0G6 4158 aa2.72□□□□□ -1.97
CHD2-221ENST00000635856 DNAH11Q96DT5 4516 aa2.7□□□□□ -1.98
CHD2-221ENST00000635856 DNAH8Q96JB1 4490 aa2.7□□□□□ -1.98
CHD2-221ENST00000635856 KRTAP4-5Q9BYR2 181 aa2.7□□□□□ -1.98
CHD2-221ENST00000635856 RNF213Q63HN8 5207 aa2.68□□□□□ -1.98
CHD2-221ENST00000635856 LCE2DQ5TA82 110 aaPredicted RBP2.68□□□□□ -1.98
CHD2-221ENST00000635856 APOBP04114 4563 aaKnown RBP2.67□□□□□ -1.98
CHD2-221ENST00000635856 HSPG2P98160 4391 aa2.67□□□□□ -1.98
CHD2-221ENST00000635856 UBR4Q5T4S7 5183 aa2.67□□□□□ -1.98
CHD2-221ENST00000635856 DYNC2H1Q8NCM8 4307 aaKnown RBP2.67□□□□□ -1.98
CHD2-221ENST00000635856 DNAH5Q8TE73 4624 aa2.67□□□□□ -1.98
CHD2-221ENST00000635856 FAT2Q9NYQ8 4349 aa2.67□□□□□ -1.98
CHD2-221ENST00000635856 FAT3Q8TDW7 4589 aa2.66□□□□□ -1.98
CHD2-221ENST00000635856 DYNC1H1Q14204 4646 aaKnown RBP2.66□□□□□ -1.98
CHD2-221ENST00000635856 LRP1BQ9NZR2 4599 aa2.66□□□□□ -1.98
CHD2-221ENST00000635856 HECTD4Q9Y4D8 3996 aa2.65□□□□□ -1.98
CHD2-221ENST00000635856 KRTAP10-4P60372 401 aaPredicted RBP2.64□□□□□ -1.99
CHD2-221ENST00000635856 LRP1Q07954 4544 aaKnown RBP2.63□□□□□ -1.99
CHD2-221ENST00000635856 DNAH17Q9UFH2 4485 aa2.63□□□□□ -1.99
CHD2-221ENST00000635856 MT1HL1P0DM35 61 aa2.63□□□□□ -1.99
CHD2-221ENST00000635856 VPS13BQ7Z7G8 4022 aa2.63□□□□□ -1.99
CHD2-221ENST00000635856 PKD1P98161 4303 aa2.63□□□□□ -1.99
CHD2-221ENST00000635856 MUC2Q02817 5179 aa2.58□□□□□ -2
CHD2-221ENST00000635856 LRP2P98164 4655 aa2.57□□□□□ -2
CHD2-221ENST00000635856 FSIP2Q5CZC0 6907 aa2.53□□□□□ -2
CHD2-221ENST00000635856 LORP23490 312 aaPredicted RBP2.53□□□□□ -2
CHD2-221ENST00000635856 LPAP08519 4548 aa2.48□□□□□ -2.01
CHD2-221ENST00000635856 KRTAP10-10P60014 251 aa2.47□□□□□ -2.01
CHD2-221ENST00000635856 LCE3AQ5TA76 89 aa2.47□□□□□ -2.01
CHD2-221ENST00000635856 LOC100996750A0A140TA64 210 aa2.45□□□□□ -2.02
CHD2-221ENST00000635856 KRTAP4-6Q9BYQ5 205 aa2.45□□□□□ -2.02
CHD2-221ENST00000635856 FAT4Q6V0I7 4981 aa2.44□□□□□ -2.02
CHD2-221ENST00000635856 HMCN2Q8NDA2 5059 aa2.43□□□□□ -2.02
CHD2-221ENST00000635856 KRTAP12-3P60328 96 aa2.4□□□□□ -2.03
CHD2-221ENST00000635856 PKHD1L1Q86WI1 4243 aa2.38□□□□□ -2.03
CHD2-221ENST00000635856 KRTAP8-1Q8IUC2 63 aa2.37□□□□□ -2.03
CHD2-221ENST00000635856 TNXBP22105 4242 aa2.3□□□□□ -2.04
CHD2-221ENST00000635856 KRTAP10-12P60413 245 aa2.29□□□□□ -2.04
CHD2-221ENST00000635856 KRTAP4-1Q9BYQ7 146 aa2.26□□□□□ -2.05
CHD2-221ENST00000635856 USH2AO75445 5202 aa2.24□□□□□ -2.05
CHD2-221ENST00000635856 MT1HP80294 61 aa2.24□□□□□ -2.05
CHD2-221ENST00000635856 LCE3CQ5T5A8 94 aa2.23□□□□□ -2.05
CHD2-221ENST00000635856 KRTAP12-4P60329 112 aa2.18□□□□□ -2.06
CHD2-221ENST00000635856 KRTAP10-5P60370 271 aa2.17□□□□□ -2.06
CHD2-221ENST00000635856 MT2AP02795 61 aa2.17□□□□□ -2.06
CHD2-221ENST00000635856 KRTAP2-3P0C7H8 128 aa2.16□□□□□ -2.06
CHD2-221ENST00000635856 SPRR2GQ9BYE4 73 aa2.16□□□□□ -2.06
CHD2-221ENST00000635856 KRTAP2-4Q9BYR9 128 aa2.16□□□□□ -2.06
CHD2-221ENST00000635856 KRTAP2-1Q9BYU5 128 aa2.16□□□□□ -2.06
CHD2-221ENST00000635856 MUC17Q685J3 4493 aa2.13□□□□□ -2.07
CHD2-221ENST00000635856 KRTAP4-8Q9BYQ9 185 aa2.12□□□□□ -2.07
CHD2-221ENST00000635856 MT1FP04733 61 aa2.12□□□□□ -2.07
CHD2-221ENST00000635856 KRTAP9-2Q9BYQ4 174 aa2.12□□□□□ -2.07
CHD2-221ENST00000635856 LCE2CQ5TA81 110 aa2.1□□□□□ -2.07
CHD2-221ENST00000635856 SSPOA2VEC9 5147 aa2.1□□□□□ -2.07
CHD2-221ENST00000635856 KRTAP19-5Q3LI72 72 aa2.06□□□□□ -2.08
CHD2-221ENST00000635856 KRTAP10-7P60409 375 aaPredicted RBP2.06□□□□□ -2.08
CHD2-221ENST00000635856 KRTAP19-2Q3LHN2 52 aa2.06□□□□□ -2.08
CHD2-221ENST00000635856 KRTAP9-8Q9BYQ0 159 aa2.06□□□□□ -2.08
CHD2-221ENST00000635856 KRTAP19-8Q3LI54 63 aa2.05□□□□□ -2.08
CHD2-221ENST00000635856 KRTAP19-1Q8IUB9 90 aa2.05□□□□□ -2.08
CHD2-221ENST00000635856 KRTAP19-4Q3LI73 84 aa2.05□□□□□ -2.08
CHD2-221ENST00000635856 SYNE2Q8WXH0 6885 aaKnown RBP2.04□□□□□ -2.08
CHD2-221ENST00000635856 KRTAP2-2Q9BYT5 123 aa2.04□□□□□ -2.08
CHD2-221ENST00000635856 LCE2AQ5TA79 106 aaPredicted RBP2.04□□□□□ -2.08
CHD2-221ENST00000635856 FLGP20930 4061 aaPredicted RBP2.03□□□□□ -2.08
CHD2-221ENST00000635856 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.02□□□□□ -2.09
CHD2-221ENST00000635856 KRTAP9-6A0A140TA67 174 aa2.02□□□□□ -2.09
CHD2-221ENST00000635856 KRTAP9-3Q9BYQ3 159 aa2.01□□□□□ -2.09
CHD2-221ENST00000635856 LCE1AQ5T7P2 110 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms