RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 LRP1BQ9NZR2 4599 aa4.34□□□□□ -1.71
SMARCA2-246ENST00000635739 M0QZ58 72 aa4.32□□□□□ -1.72
SMARCA2-246ENST00000635739 SACSQ9NZJ4 4579 aa4.32□□□□□ -1.72
SMARCA2-246ENST00000635739 P0C880 135 aa4.32□□□□□ -1.72
SMARCA2-246ENST00000635739 TPRXLQ17RH7 258 aa4.31□□□□□ -1.72
SMARCA2-246ENST00000635739 R4GN34 69 aa4.3□□□□□ -1.72
SMARCA2-246ENST00000635739 LUZP6Q538Z0 58 aa4.3□□□□□ -1.72
SMARCA2-246ENST00000635739 KRTAP10-6P60371 365 aaPredicted RBP4.29□□□□□ -1.72
SMARCA2-246ENST00000635739 VPS13BQ7Z7G8 4022 aa4.27□□□□□ -1.73
SMARCA2-246ENST00000635739 KMT2CQ8NEZ4 4911 aaKnown RBP4.27□□□□□ -1.73
SMARCA2-246ENST00000635739 KRTAP13-4Q3LI77 160 aa4.27□□□□□ -1.73
SMARCA2-246ENST00000635739 XP32Q5T750 250 aa4.25□□□□□ -1.73
SMARCA2-246ENST00000635739 KRTAP12-2P59991 146 aa4.23□□□□□ -1.73
SMARCA2-246ENST00000635739 CAMK2N1Q7Z7J9 78 aa4.22□□□□□ -1.73
SMARCA2-246ENST00000635739 FAT1Q14517 4588 aa4.2□□□□□ -1.74
SMARCA2-246ENST00000635739 KRTAP3-2Q9BYR7 98 aa4.2□□□□□ -1.74
SMARCA2-246ENST00000635739 KRTAP3-3Q9BYR6 98 aa4.2□□□□□ -1.74
SMARCA2-246ENST00000635739 A0A0A0MQY5 61 aa4.19□□□□□ -1.74
SMARCA2-246ENST00000635739 KRTAP12-1P59990 96 aa4.19□□□□□ -1.74
SMARCA2-246ENST00000635739 DYNC1H1Q14204 4646 aaKnown RBP4.18□□□□□ -1.74
SMARCA2-246ENST00000635739 KRTAP10-8P60410 259 aa4.17□□□□□ -1.74
SMARCA2-246ENST00000635739 KRTAP15-1Q3LI76 137 aa4.17□□□□□ -1.74
SMARCA2-246ENST00000635739 RYR2Q92736 4967 aa4.16□□□□□ -1.74
SMARCA2-246ENST00000635739 PLAC4Q8WY50 150 aa4.15□□□□□ -1.74
SMARCA2-246ENST00000635739 RYR3Q15413 4870 aa4.14□□□□□ -1.75
SMARCA2-246ENST00000635739 APOBP04114 4563 aaKnown RBP4.13□□□□□ -1.75
SMARCA2-246ENST00000635739 A0A1B0GVY2 172 aa4.12□□□□□ -1.75
SMARCA2-246ENST00000635739 KRTAP10-4P60372 401 aaPredicted RBP4.09□□□□□ -1.75
SMARCA2-246ENST00000635739 PP632Q6XCG6 107 aa4.07□□□□□ -1.76
SMARCA2-246ENST00000635739 LRP1Q07954 4544 aaKnown RBP4.06□□□□□ -1.76
SMARCA2-246ENST00000635739 PKHD1L1Q86WI1 4243 aa4.04□□□□□ -1.76
SMARCA2-246ENST00000635739 HSPG2P98160 4391 aa4.01□□□□□ -1.77
SMARCA2-246ENST00000635739 EPPK1P58107 5090 aaKnown RBP3.99□□□□□ -1.77
SMARCA2-246ENST00000635739 MYCBP2O75592 4640 aa3.98□□□□□ -1.77
SMARCA2-246ENST00000635739 KIAA1109Q2LD37 5005 aa3.98□□□□□ -1.77
SMARCA2-246ENST00000635739 TNP1P09430 55 aa3.97□□□□□ -1.77
SMARCA2-246ENST00000635739 KRTAP17-1Q9BYP8 105 aa3.96□□□□□ -1.78
SMARCA2-246ENST00000635739 TNXBP22105 4242 aa3.96□□□□□ -1.78
SMARCA2-246ENST00000635739 RYR1P21817 5038 aa3.93□□□□□ -1.78
SMARCA2-246ENST00000635739 FAT3Q8TDW7 4589 aa3.9□□□□□ -1.78
SMARCA2-246ENST00000635739 MT1HL1P0DM35 61 aa3.89□□□□□ -1.79
SMARCA2-246ENST00000635739 LPAP08519 4548 aa3.85□□□□□ -1.79
SMARCA2-246ENST00000635739 ABCA13Q86UQ4 5058 aa3.85□□□□□ -1.79
SMARCA2-246ENST00000635739 KRTAP10-10P60014 251 aa3.81□□□□□ -1.8
SMARCA2-246ENST00000635739 LORP23490 312 aaPredicted RBP3.8□□□□□ -1.8
SMARCA2-246ENST00000635739 LRP2P98164 4655 aa3.78□□□□□ -1.8
SMARCA2-246ENST00000635739 KRTAP4-5Q9BYR2 181 aa3.73□□□□□ -1.81
SMARCA2-246ENST00000635739 PRO2289Q9P1D8 64 aa3.7□□□□□ -1.82
SMARCA2-246ENST00000635739 KRTAP23-1A1A580 65 aa3.69□□□□□ -1.82
SMARCA2-246ENST00000635739 HERC2O95714 4834 aa3.69□□□□□ -1.82
SMARCA2-246ENST00000635739 MUC2Q02817 5179 aa3.67□□□□□ -1.82
SMARCA2-246ENST00000635739 HERC1Q15751 4861 aa3.63□□□□□ -1.83
SMARCA2-246ENST00000635739 PCLOQ9Y6V0 5065 aa3.63□□□□□ -1.83
SMARCA2-246ENST00000635739 KRTAP4-1Q9BYQ7 146 aa3.6□□□□□ -1.83
SMARCA2-246ENST00000635739 BIRC6Q9NR09 4857 aa3.58□□□□□ -1.84
SMARCA2-246ENST00000635739 MUC17Q685J3 4493 aa3.56□□□□□ -1.84
SMARCA2-246ENST00000635739 INE1O15225 51 aa3.55□□□□□ -1.84
SMARCA2-246ENST00000635739 LCE3AQ5TA76 89 aa3.5□□□□□ -1.85
SMARCA2-246ENST00000635739 SPRR5A0A1B0GTR4 108 aa3.49□□□□□ -1.85
SMARCA2-246ENST00000635739 HMCN2Q8NDA2 5059 aa3.48□□□□□ -1.85
SMARCA2-246ENST00000635739 FAT4Q6V0I7 4981 aa3.47□□□□□ -1.85
SMARCA2-246ENST00000635739 RNF213Q63HN8 5207 aa3.47□□□□□ -1.85
SMARCA2-246ENST00000635739 UBR4Q5T4S7 5183 aa3.43□□□□□ -1.86
SMARCA2-246ENST00000635739 SPRR2GQ9BYE4 73 aa3.42□□□□□ -1.86
SMARCA2-246ENST00000635739 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
SMARCA2-246ENST00000635739 KRTAP10-12P60413 245 aa3.4□□□□□ -1.87
SMARCA2-246ENST00000635739 KRTAP19-2Q3LHN2 52 aa3.38□□□□□ -1.87
SMARCA2-246ENST00000635739 FLGP20930 4061 aaPredicted RBP3.36□□□□□ -1.87
SMARCA2-246ENST00000635739 KRTAP8-1Q8IUC2 63 aa3.36□□□□□ -1.87
SMARCA2-246ENST00000635739 KRTAP19-1Q8IUB9 90 aa3.33□□□□□ -1.88
SMARCA2-246ENST00000635739 MT2AP02795 61 aa3.27□□□□□ -1.89
SMARCA2-246ENST00000635739 MT1FP04733 61 aa3.26□□□□□ -1.89
SMARCA2-246ENST00000635739 MT1HP80294 61 aa3.26□□□□□ -1.89
SMARCA2-246ENST00000635739 KRTAP19-8Q3LI54 63 aa3.22□□□□□ -1.89
SMARCA2-246ENST00000635739 LCE2CQ5TA81 110 aa3.22□□□□□ -1.89
SMARCA2-246ENST00000635739 MT1XP80297 61 aa3.17□□□□□ -1.9
SMARCA2-246ENST00000635739 KRTAP10-5P60370 271 aa3.17□□□□□ -1.9
SMARCA2-246ENST00000635739 MT1BP07438 61 aa3.14□□□□□ -1.91
SMARCA2-246ENST00000635739 KRTAP10-7P60409 375 aaPredicted RBP3.14□□□□□ -1.91
SMARCA2-246ENST00000635739 LCE3CQ5T5A8 94 aa3.13□□□□□ -1.91
SMARCA2-246ENST00000635739 KRTAP9-8Q9BYQ0 159 aa3.13□□□□□ -1.91
SMARCA2-246ENST00000635739 CRCT1Q9UGL9 99 aa3.13□□□□□ -1.91
SMARCA2-246ENST00000635739 KRTAP19-5Q3LI72 72 aa3.12□□□□□ -1.91
SMARCA2-246ENST00000635739 KRTAP9-6A0A140TA67 174 aa3.09□□□□□ -1.91
SMARCA2-246ENST00000635739 KRTAP9-2Q9BYQ4 174 aa3.09□□□□□ -1.92
SMARCA2-246ENST00000635739 USH2AO75445 5202 aa3.06□□□□□ -1.92
SMARCA2-246ENST00000635739 KRTAP9-3Q9BYQ3 159 aa3□□□□□ -1.93
SMARCA2-246ENST00000635739 SPRR2FQ96RM1 72 aa2.99□□□□□ -1.93
SMARCA2-246ENST00000635739 KRTAP19-4Q3LI73 84 aa2.97□□□□□ -1.93
SMARCA2-246ENST00000635739 KRTAP4-8A0A0G2JLE6 195 aa2.92□□□□□ -1.94
SMARCA2-246ENST00000635739 KRTAP4-8Q9BYQ9 185 aa2.92□□□□□ -1.94
SMARCA2-246ENST00000635739 KMT2DO14686 5537 aa2.92□□□□□ -1.94
SMARCA2-246ENST00000635739 LCE2DQ5TA82 110 aaPredicted RBP2.91□□□□□ -1.94
SMARCA2-246ENST00000635739 SPRR2EP22531 72 aa2.9□□□□□ -1.94
SMARCA2-246ENST00000635739 SPRR2BP35325 72 aa2.9□□□□□ -1.94
SMARCA2-246ENST00000635739 SPRR2AP35326 72 aa2.9□□□□□ -1.94
SMARCA2-246ENST00000635739 FSIP2Q5CZC0 6907 aa2.9□□□□□ -1.95
SMARCA2-246ENST00000635739 LCE2AQ5TA79 106 aaPredicted RBP2.86□□□□□ -1.95
SMARCA2-246ENST00000635739 KRTAP4-7Q9BYR0 210 aa2.85□□□□□ -1.95
SMARCA2-246ENST00000635739 LCE2BO14633 110 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms