RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 LCE2AQ5TA79 106 aaPredicted RBP6.9□□□□□ -1.3
PHACTR4-209ENST00000633371 LCA10Q71F78 164 aa6.9□□□□□ -1.3
PHACTR4-209ENST00000633371 S4R3F8 94 aa6.89□□□□□ -1.31
PHACTR4-209ENST00000633371 ATP5EP56381 51 aaPredicted RBP6.84□□□□□ -1.31
PHACTR4-209ENST00000633371 COA5Q86WW8 74 aa6.83□□□□□ -1.32
PHACTR4-209ENST00000633371 M0R2T5 61 aa6.76□□□□□ -1.33
PHACTR4-209ENST00000633371 KRTAP10-6P60371 365 aaPredicted RBP6.75□□□□□ -1.33
PHACTR4-209ENST00000633371 CSAG1Q6PB30 78 aa6.75□□□□□ -1.33
PHACTR4-209ENST00000633371 CHKB-CPT1BH3BT56 60 aa6.73□□□□□ -1.33
PHACTR4-209ENST00000633371 LORP23490 312 aaPredicted RBP6.73□□□□□ -1.33
PHACTR4-209ENST00000633371 KRTAP9-8Q9BYQ0 159 aa6.72□□□□□ -1.33
PHACTR4-209ENST00000633371 SERP1Q9Y6X1 66 aa6.7□□□□□ -1.34
PHACTR4-209ENST00000633371 MT2AP02795 61 aa6.66□□□□□ -1.34
PHACTR4-209ENST00000633371 SPTSSBQ8NFR3 76 aa6.64□□□□□ -1.35
PHACTR4-209ENST00000633371 KRTAP3-2Q9BYR7 98 aa6.63□□□□□ -1.35
PHACTR4-209ENST00000633371 MT1FP04733 61 aa6.62□□□□□ -1.35
PHACTR4-209ENST00000633371 H0YAA0 97 aa6.6□□□□□ -1.35
PHACTR4-209ENST00000633371 RPS28P62857 69 aaKnown RBP6.59□□□□□ -1.35
PHACTR4-209ENST00000633371 ADM2Q7Z4H4 148 aa6.57□□□□□ -1.36
PHACTR4-209ENST00000633371 P0C880 135 aa6.56□□□□□ -1.36
PHACTR4-209ENST00000633371 KRTAP10-10P60014 251 aa6.52□□□□□ -1.37
PHACTR4-209ENST00000633371 LINC01558Q9Y6Z2 57 aa6.51□□□□□ -1.37
PHACTR4-209ENST00000633371 KRTAP9-3Q9BYQ3 159 aa6.49□□□□□ -1.37
PHACTR4-209ENST00000633371 SMIM26A0A096LP01 95 aa6.48□□□□□ -1.37
PHACTR4-209ENST00000633371 Q1T7F1 81 aa6.44□□□□□ -1.38
PHACTR4-209ENST00000633371 KRTAP19-1Q8IUB9 90 aa6.43□□□□□ -1.38
PHACTR4-209ENST00000633371 A0A1B0GU69 56 aa6.41□□□□□ -1.38
PHACTR4-209ENST00000633371 SEC61GP60059 68 aa6.38□□□□□ -1.39
PHACTR4-209ENST00000633371 KRTAP13-4Q3LI77 160 aa6.38□□□□□ -1.39
PHACTR4-209ENST00000633371 SPRR2GQ9BYE4 73 aa6.37□□□□□ -1.39
PHACTR4-209ENST00000633371 PRR15LQ9BU68 103 aa6.36□□□□□ -1.39
PHACTR4-209ENST00000633371 CRIPTQ9P021 101 aa6.36□□□□□ -1.39
PHACTR4-209ENST00000633371 LCE2BO14633 110 aa6.35□□□□□ -1.39
PHACTR4-209ENST00000633371 V9GYY9 64 aa6.35□□□□□ -1.39
PHACTR4-209ENST00000633371 LCE2DQ5TA82 110 aaPredicted RBP6.33□□□□□ -1.4
PHACTR4-209ENST00000633371 A0A1B0GU33 70 aa6.32□□□□□ -1.4
PHACTR4-209ENST00000633371 PSPHP1O15172 72 aa6.32□□□□□ -1.4
PHACTR4-209ENST00000633371 M0QZ58 72 aa6.31□□□□□ -1.4
PHACTR4-209ENST00000633371 Q5VV11 94 aa6.31□□□□□ -1.4
PHACTR4-209ENST00000633371 R4GN34 69 aa6.29□□□□□ -1.4
PHACTR4-209ENST00000633371 KRTAP19-8Q3LI54 63 aa6.28□□□□□ -1.4
PHACTR4-209ENST00000633371 SPATA8Q6RVD6 105 aa6.27□□□□□ -1.41
PHACTR4-209ENST00000633371 MT1BP07438 61 aa6.23□□□□□ -1.41
PHACTR4-209ENST00000633371 USH2AO75445 5202 aa6.21□□□□□ -1.42
PHACTR4-209ENST00000633371 KRTAP9-2Q9BYQ4 174 aa6.2□□□□□ -1.42
PHACTR4-209ENST00000633371 LINC01554Q52M75 96 aa6.18□□□□□ -1.42
PHACTR4-209ENST00000633371 A8MU10 97 aa6.17□□□□□ -1.42
PHACTR4-209ENST00000633371 UQCR11O14957 56 aa6.17□□□□□ -1.42
PHACTR4-209ENST00000633371 A0A0D9SG42 100 aa6.14□□□□□ -1.43
PHACTR4-209ENST00000633371 A6NN06 94 aa6.1□□□□□ -1.43
PHACTR4-209ENST00000633371 MIR22HGQ0VDD5 57 aa6.1□□□□□ -1.43
PHACTR4-209ENST00000633371 KRTAP12-1P59990 96 aa6.09□□□□□ -1.43
PHACTR4-209ENST00000633371 A6NED7 52 aa6.08□□□□□ -1.44
PHACTR4-209ENST00000633371 KRTAP12-2P59991 146 aa6.05□□□□□ -1.44
PHACTR4-209ENST00000633371 SSPOA2VEC9 5147 aa6.03□□□□□ -1.44
PHACTR4-209ENST00000633371 PLAC4Q8WY50 150 aa6.01□□□□□ -1.45
PHACTR4-209ENST00000633371 KRTAP19-6Q3LI70 58 aa5.99□□□□□ -1.45
PHACTR4-209ENST00000633371 SPINT4Q6UDR6 99 aa5.99□□□□□ -1.45
PHACTR4-209ENST00000633371 CDC42SE1Q9NRR8 79 aa5.98□□□□□ -1.45
PHACTR4-209ENST00000633371 MT1XP80297 61 aa5.96□□□□□ -1.46
PHACTR4-209ENST00000633371 KRTAP10-5P60370 271 aa5.94□□□□□ -1.46
PHACTR4-209ENST00000633371 CRCT1Q9UGL9 99 aa5.93□□□□□ -1.46
PHACTR4-209ENST00000633371 FSIP2Q5CZC0 6907 aa5.9□□□□□ -1.47
PHACTR4-209ENST00000633371 CAMK2N1Q7Z7J9 78 aa5.85□□□□□ -1.47
PHACTR4-209ENST00000633371 BRK1Q8WUW1 75 aa5.84□□□□□ -1.47
PHACTR4-209ENST00000633371 FCGBPQ9Y6R7 5405 aaPredicted RBP5.82□□□□□ -1.48
PHACTR4-209ENST00000633371 C10orf95Q9H7T3 257 aa5.8□□□□□ -1.48
PHACTR4-209ENST00000633371 KRTAP9-6A0A140TA67 174 aa5.79□□□□□ -1.48
PHACTR4-209ENST00000633371 K7ERS5 55 aa5.77□□□□□ -1.49
PHACTR4-209ENST00000633371 PRO2289Q9P1D8 64 aa5.77□□□□□ -1.49
PHACTR4-209ENST00000633371 KRTAP10-7P60409 375 aaPredicted RBP5.7□□□□□ -1.5
PHACTR4-209ENST00000633371 KRTAP10-12P60413 245 aa5.64□□□□□ -1.51
PHACTR4-209ENST00000633371 PRO0628Q9UI54 55 aa5.6□□□□□ -1.51
PHACTR4-209ENST00000633371 ROMO1P60602 79 aa5.59□□□□□ -1.51
PHACTR4-209ENST00000633371 KRTAP4-8A0A0G2JLE6 195 aa5.55□□□□□ -1.52
PHACTR4-209ENST00000633371 TNP1P09430 55 aa5.55□□□□□ -1.52
PHACTR4-209ENST00000633371 KRTAP4-8Q9BYQ9 185 aa5.55□□□□□ -1.52
PHACTR4-209ENST00000633371 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.52□□□□□ -1.53
PHACTR4-209ENST00000633371 PMAIP1Q13794 54 aa5.51□□□□□ -1.53
PHACTR4-209ENST00000633371 KRTAP25-1Q3LHN0 102 aa5.51□□□□□ -1.53
PHACTR4-209ENST00000633371 KMT2DO14686 5537 aa5.48□□□□□ -1.53
PHACTR4-209ENST00000633371 LCE3AQ5TA76 89 aa5.45□□□□□ -1.54
PHACTR4-209ENST00000633371 MACF1Q9UPN3 7388 aaKnown RBP5.38□□□□□ -1.55
PHACTR4-209ENST00000633371 KRTAP8-1Q8IUC2 63 aa5.38□□□□□ -1.55
PHACTR4-209ENST00000633371 KRTAP23-1A1A580 65 aa5.34□□□□□ -1.55
PHACTR4-209ENST00000633371 KRTAP19-7Q3SYF9 63 aa5.33□□□□□ -1.56
PHACTR4-209ENST00000633371 KRTAP6-3Q3LI67 103 aa5.32□□□□□ -1.56
PHACTR4-209ENST00000633371 KRTAP5-9P26371 169 aa5.31□□□□□ -1.56
PHACTR4-209ENST00000633371 KRTAP19-5Q3LI72 72 aa5.31□□□□□ -1.56
PHACTR4-209ENST00000633371 PRAC1Q96KF2 57 aa5.28□□□□□ -1.56
PHACTR4-209ENST00000633371 KRTAP9-7A8MTY7 169 aa5.27□□□□□ -1.57
PHACTR4-209ENST00000633371 SPRR2FQ96RM1 72 aa5.24□□□□□ -1.57
PHACTR4-209ENST00000633371 MT1EP04732 61 aa5.23□□□□□ -1.57
PHACTR4-209ENST00000633371 SYNE2Q8WXH0 6885 aaKnown RBP5.23□□□□□ -1.57
PHACTR4-209ENST00000633371 PP632Q6XCG6 107 aa5.22□□□□□ -1.57
PHACTR4-209ENST00000633371 KTN1-AS1Q86SY8 53 aa5.21□□□□□ -1.58
PHACTR4-209ENST00000633371 KRTAP12-3P60328 96 aa5.2□□□□□ -1.58
PHACTR4-209ENST00000633371 MUC12Q9UKN1 5478 aa5.16□□□□□ -1.58
PHACTR4-209ENST00000633371 LCE1AQ5T7P2 110 aa5.1□□□□□ -1.59
PHACTR4-209ENST00000633371 MT1LQ93083 61 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 196 ms