RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, human

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDLIM5-223	ENST00000627587	FAT4	Q6V0I7	4981 aa		5.19	□□□□□ -1.58
PDLIM5-223	ENST00000627587	IGLV7-46	A0A075B6I9	117 aa		5.19	□□□□□ -1.58
PDLIM5-223	ENST00000627587	LINC00208	Q96KT6	92 aa		5.19	□□□□□ -1.58
PDLIM5-223	ENST00000627587	KRTAP13-3	Q3SY46	172 aa		5.18	□□□□□ -1.58
PDLIM5-223	ENST00000627587	NDUFC1	O43677	76 aa		5.17	□□□□□ -1.58
PDLIM5-223	ENST00000627587		Q5W150	140 aa		5.17	□□□□□ -1.58
PDLIM5-223	ENST00000627587	ZCCHC13	Q8WW36	166 aa	Known RBP	5.17	□□□□□ -1.58
PDLIM5-223	ENST00000627587	C1orf64	Q8NEQ6	169 aa		5.16	□□□□□ -1.58
PDLIM5-223	ENST00000627587	TPRXL	Q17RH7	258 aa		5.15	□□□□□ -1.58
PDLIM5-223	ENST00000627587	C20orf166-AS1	Q96NR2	134 aa		5.15	□□□□□ -1.58
PDLIM5-223	ENST00000627587		A8MUU9	505 aa		5.15	□□□□□ -1.59
PDLIM5-223	ENST00000627587		H7BZZ5	65 aa		5.15	□□□□□ -1.59
PDLIM5-223	ENST00000627587	LOC101927531	A0A1B0GV80	90 aa		5.12	□□□□□ -1.59
PDLIM5-223	ENST00000627587		Q75L30	129 aa		5.11	□□□□□ -1.59
PDLIM5-223	ENST00000627587	KRTAP5-3	Q6L8H2	238 aa		5.1	□□□□□ -1.59
PDLIM5-223	ENST00000627587	RBM12B-AS1	Q9P1G2	102 aa		5.1	□□□□□ -1.59
PDLIM5-223	ENST00000627587	IGKV2-30	P06310	120 aa		5.08	□□□□□ -1.6
PDLIM5-223	ENST00000627587	PCOTH	Q58A44	107 aa		5.07	□□□□□ -1.6
PDLIM5-223	ENST00000627587	CYP4F30P	Q9H0H9	118 aa		5.07	□□□□□ -1.6
PDLIM5-223	ENST00000627587	ATP5E	P56381	51 aa	Predicted RBP	5.07	□□□□□ -1.6
PDLIM5-223	ENST00000627587	RPL37	P61927	97 aa	Known RBP	5.07	□□□□□ -1.6
PDLIM5-223	ENST00000627587	IGKV2D-30	A0A075B6S6	120 aa		5.06	□□□□□ -1.6
PDLIM5-223	ENST00000627587	ATP11AUN	Q6ZP68	121 aa		5.06	□□□□□ -1.6
PDLIM5-223	ENST00000627587	C7orf65	Q6ZTY9	151 aa		5.05	□□□□□ -1.6
PDLIM5-223	ENST00000627587	KTN1-AS1	Q86SY8	53 aa		5.05	□□□□□ -1.6
PDLIM5-223	ENST00000627587	SPANXA2-OT1	Q8N9U9	137 aa		5.04	□□□□□ -1.6
PDLIM5-223	ENST00000627587	SEC61B	P60468	96 aa	Known RBP	5.03	□□□□□ -1.6
PDLIM5-223	ENST00000627587	HRES1	P13985	223 aa		5	□□□□□ -1.61
PDLIM5-223	ENST00000627587	SPINK7	P58062	85 aa		4.99	□□□□□ -1.61
PDLIM5-223	ENST00000627587		A0A0A0MQY5	61 aa		4.98	□□□□□ -1.61
PDLIM5-223	ENST00000627587	CRCT1	Q9UGL9	99 aa		4.95	□□□□□ -1.62
PDLIM5-223	ENST00000627587	DMAC1	Q96GE9	116 aa		4.92	□□□□□ -1.62
PDLIM5-223	ENST00000627587	KRTAP4-1	Q9BYQ7	146 aa		4.92	□□□□□ -1.62
PDLIM5-223	ENST00000627587	LCA10	Q71F78	164 aa		4.92	□□□□□ -1.62
PDLIM5-223	ENST00000627587	ACYP2	P14621	99 aa		4.91	□□□□□ -1.62
PDLIM5-223	ENST00000627587		A8MUN3	132 aa		4.89	□□□□□ -1.63
PDLIM5-223	ENST00000627587		Q1T7F1	81 aa		4.89	□□□□□ -1.63
PDLIM5-223	ENST00000627587	COA5	Q86WW8	74 aa		4.89	□□□□□ -1.63
PDLIM5-223	ENST00000627587	KRTAP9-8	Q9BYQ0	159 aa		4.89	□□□□□ -1.63
PDLIM5-223	ENST00000627587	MPLKIP	Q8TAP9	179 aa		4.88	□□□□□ -1.63
PDLIM5-223	ENST00000627587	KRTAP3-1	Q9BYR8	98 aa		4.88	□□□□□ -1.63
PDLIM5-223	ENST00000627587	FSIP2	Q5CZC0	6907 aa		4.87	□□□□□ -1.63
PDLIM5-223	ENST00000627587	COX6B2	Q6YFQ2	88 aa		4.86	□□□□□ -1.63
PDLIM5-223	ENST00000627587	CHKB-CPT1B	H3BT56	60 aa		4.84	□□□□□ -1.63
PDLIM5-223	ENST00000627587	MT1H	P80294	61 aa		4.82	□□□□□ -1.64
PDLIM5-223	ENST00000627587		A6NN06	94 aa		4.81	□□□□□ -1.64
PDLIM5-223	ENST00000627587	KRTAP19-2	Q3LHN2	52 aa		4.81	□□□□□ -1.64
PDLIM5-223	ENST00000627587	KRTAP10-6	P60371	365 aa	Predicted RBP	4.77	□□□□□ -1.65
PDLIM5-223	ENST00000627587	LINC01554	Q52M75	96 aa		4.76	□□□□□ -1.65
PDLIM5-223	ENST00000627587		M0R2T5	61 aa		4.75	□□□□□ -1.65
PDLIM5-223	ENST00000627587	H1FX-AS1	Q4G0G2	97 aa		4.75	□□□□□ -1.65
PDLIM5-223	ENST00000627587	SPTSSB	Q8NFR3	76 aa		4.75	□□□□□ -1.65
PDLIM5-223	ENST00000627587		S4R3F8	94 aa		4.72	□□□□□ -1.65
PDLIM5-223	ENST00000627587	PSPHP1	O15172	72 aa		4.69	□□□□□ -1.66
PDLIM5-223	ENST00000627587		Q5VV11	94 aa		4.69	□□□□□ -1.66
PDLIM5-223	ENST00000627587	LINC01558	Q9Y6Z2	57 aa		4.69	□□□□□ -1.66
PDLIM5-223	ENST00000627587	PRR15L	Q9BU68	103 aa		4.66	□□□□□ -1.66
PDLIM5-223	ENST00000627587	CDC42SE1	Q9NRR8	79 aa		4.66	□□□□□ -1.66
PDLIM5-223	ENST00000627587	FLG	P20930	4061 aa	Predicted RBP	4.66	□□□□□ -1.66
PDLIM5-223	ENST00000627587		A8MU10	97 aa		4.64	□□□□□ -1.67
PDLIM5-223	ENST00000627587		A0A1B0GU69	56 aa		4.64	□□□□□ -1.67
PDLIM5-223	ENST00000627587	CSAG1	Q6PB30	78 aa		4.62	□□□□□ -1.67
PDLIM5-223	ENST00000627587		A6NED7	52 aa		4.56	□□□□□ -1.68
PDLIM5-223	ENST00000627587	USH2A	O75445	5202 aa		4.56	□□□□□ -1.68
PDLIM5-223	ENST00000627587	SSPO	A2VEC9	5147 aa		4.55	□□□□□ -1.68
PDLIM5-223	ENST00000627587	PRAC1	Q96KF2	57 aa		4.52	□□□□□ -1.69
PDLIM5-223	ENST00000627587		H0YAA0	97 aa		4.51	□□□□□ -1.69
PDLIM5-223	ENST00000627587	UQCR11	O14957	56 aa		4.5	□□□□□ -1.69
PDLIM5-223	ENST00000627587	ADM2	Q7Z4H4	148 aa		4.5	□□□□□ -1.69
PDLIM5-223	ENST00000627587		A0A1B0GU33	70 aa		4.49	□□□□□ -1.69
PDLIM5-223	ENST00000627587		P0C880	135 aa		4.47	□□□□□ -1.69
PDLIM5-223	ENST00000627587	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.46	□□□□□ -1.7
PDLIM5-223	ENST00000627587	MT2A	P02795	61 aa		4.44	□□□□□ -1.7
PDLIM5-223	ENST00000627587	MIR22HG	Q0VDD5	57 aa		4.44	□□□□□ -1.7
PDLIM5-223	ENST00000627587	SPATA8	Q6RVD6	105 aa		4.42	□□□□□ -1.7
PDLIM5-223	ENST00000627587	KRTAP10-10	P60014	251 aa		4.41	□□□□□ -1.7
PDLIM5-223	ENST00000627587	KRTAP13-4	Q3LI77	160 aa		4.41	□□□□□ -1.7
PDLIM5-223	ENST00000627587	ROMO1	P60602	79 aa		4.41	□□□□□ -1.7
PDLIM5-223	ENST00000627587	MT1F	P04733	61 aa		4.39	□□□□□ -1.71
PDLIM5-223	ENST00000627587		M0QZ58	72 aa		4.37	□□□□□ -1.71
PDLIM5-223	ENST00000627587		R4GN34	69 aa		4.37	□□□□□ -1.71
PDLIM5-223	ENST00000627587	MACF1	Q9UPN3	7388 aa	Known RBP	4.36	□□□□□ -1.71
PDLIM5-223	ENST00000627587	KRTAP19-6	Q3LI70	58 aa		4.33	□□□□□ -1.72
PDLIM5-223	ENST00000627587	SYNE2	Q8WXH0	6885 aa	Known RBP	4.33	□□□□□ -1.72
PDLIM5-223	ENST00000627587	CRIPT	Q9P021	101 aa		4.32	□□□□□ -1.72
PDLIM5-223	ENST00000627587		A0A0D9SG42	100 aa		4.31	□□□□□ -1.72
PDLIM5-223	ENST00000627587	KRTAP6-3	Q3LI67	103 aa		4.27	□□□□□ -1.73
PDLIM5-223	ENST00000627587		K7ERS5	55 aa		4.26	□□□□□ -1.73
PDLIM5-223	ENST00000627587	KRTAP25-1	Q3LHN0	102 aa		4.22	□□□□□ -1.73
PDLIM5-223	ENST00000627587	KRTAP12-1	P59990	96 aa		4.22	□□□□□ -1.73
PDLIM5-223	ENST00000627587	SPINT4	Q6UDR6	99 aa		4.22	□□□□□ -1.73
PDLIM5-223	ENST00000627587	SPRR2G	Q9BYE4	73 aa		4.22	□□□□□ -1.73
PDLIM5-223	ENST00000627587	KRTAP12-2	P59991	146 aa		4.2	□□□□□ -1.74
PDLIM5-223	ENST00000627587	LUZP6	Q538Z0	58 aa		4.19	□□□□□ -1.74
PDLIM5-223	ENST00000627587	NEB	P20929	6669 aa		4.12	□□□□□ -1.75
PDLIM5-223	ENST00000627587	KRTAP19-8	Q3LI54	63 aa		4.11	□□□□□ -1.75
PDLIM5-223	ENST00000627587	KRTAP15-1	Q3LI76	137 aa		4.1	□□□□□ -1.75
PDLIM5-223	ENST00000627587	NDUFAF8	A1L188	74 aa		4.09	□□□□□ -1.75
PDLIM5-223	ENST00000627587	PLAC4	Q8WY50	150 aa		4.09	□□□□□ -1.75
PDLIM5-223	ENST00000627587	CAMK2N1	Q7Z7J9	78 aa		4.09	□□□□□ -1.76

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