RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 C20orf166-AS1Q96NR2 134 aa4.06□□□□□ -1.76
CTNNA1-244ENST00000627109 A0A1B0GU69 56 aa4.06□□□□□ -1.76
CTNNA1-244ENST00000627109 A8MUU9 505 aa4.05□□□□□ -1.76
CTNNA1-244ENST00000627109 SPINK7P58062 85 aa4.05□□□□□ -1.76
CTNNA1-244ENST00000627109 KRTAP4-5Q9BYR2 181 aa4.05□□□□□ -1.76
CTNNA1-244ENST00000627109 APOBP04114 4563 aaKnown RBP4.05□□□□□ -1.76
CTNNA1-244ENST00000627109 DMAC1Q96GE9 116 aa4.05□□□□□ -1.76
CTNNA1-244ENST00000627109 KRTAP25-1Q3LHN0 102 aa4.03□□□□□ -1.76
CTNNA1-244ENST00000627109 C9orf92A6NGG3 77 aa4.03□□□□□ -1.76
CTNNA1-244ENST00000627109 BIRC6Q9NR09 4857 aa4.02□□□□□ -1.77
CTNNA1-244ENST00000627109 LINC00304Q8N9R0 145 aa4.02□□□□□ -1.77
CTNNA1-244ENST00000627109 KRTAP10-4P60372 401 aaPredicted RBP4.01□□□□□ -1.77
CTNNA1-244ENST00000627109 RYR1P21817 5038 aa3.99□□□□□ -1.77
CTNNA1-244ENST00000627109 KRTAP17-1Q9BYP8 105 aa3.99□□□□□ -1.77
CTNNA1-244ENST00000627109 LORP23490 312 aaPredicted RBP3.97□□□□□ -1.77
CTNNA1-244ENST00000627109 HERC2O95714 4834 aa3.95□□□□□ -1.78
CTNNA1-244ENST00000627109 UQCR11O14957 56 aa3.95□□□□□ -1.78
CTNNA1-244ENST00000627109 HSPG2P98160 4391 aa3.94□□□□□ -1.78
CTNNA1-244ENST00000627109 MYCBP2O75592 4640 aa3.93□□□□□ -1.78
CTNNA1-244ENST00000627109 TNXBP22105 4242 aa3.92□□□□□ -1.78
CTNNA1-244ENST00000627109 ABCA13Q86UQ4 5058 aa3.9□□□□□ -1.79
CTNNA1-244ENST00000627109 LRP1Q07954 4544 aaKnown RBP3.9□□□□□ -1.79
CTNNA1-244ENST00000627109 SPATA8Q6RVD6 105 aa3.87□□□□□ -1.79
CTNNA1-244ENST00000627109 P0C880 135 aa3.87□□□□□ -1.79
CTNNA1-244ENST00000627109 CRIPTQ9P021 101 aa3.85□□□□□ -1.79
CTNNA1-244ENST00000627109 PCLOQ9Y6V0 5065 aa3.85□□□□□ -1.79
CTNNA1-244ENST00000627109 FAT3Q8TDW7 4589 aa3.85□□□□□ -1.79
CTNNA1-244ENST00000627109 KRTAP3-1Q9BYR8 98 aa3.83□□□□□ -1.8
CTNNA1-244ENST00000627109 KRTAP10-8P60410 259 aa3.82□□□□□ -1.8
CTNNA1-244ENST00000627109 MT1HL1P0DM35 61 aa3.81□□□□□ -1.8
CTNNA1-244ENST00000627109 A0A1B0GU33 70 aa3.8□□□□□ -1.8
CTNNA1-244ENST00000627109 R4GN34 69 aa3.8□□□□□ -1.8
CTNNA1-244ENST00000627109 HERC1Q15751 4861 aa3.79□□□□□ -1.8
CTNNA1-244ENST00000627109 A0A0D9SG42 100 aa3.76□□□□□ -1.81
CTNNA1-244ENST00000627109 COX6B2Q6YFQ2 88 aa3.75□□□□□ -1.81
CTNNA1-244ENST00000627109 H1FX-AS1Q4G0G2 97 aa3.73□□□□□ -1.81
CTNNA1-244ENST00000627109 H0YAA0 97 aa3.72□□□□□ -1.81
CTNNA1-244ENST00000627109 RPL37P61927 97 aaKnown RBP3.72□□□□□ -1.81
CTNNA1-244ENST00000627109 LRP2P98164 4655 aa3.68□□□□□ -1.82
CTNNA1-244ENST00000627109 XP32Q5T750 250 aa3.68□□□□□ -1.82
CTNNA1-244ENST00000627109 S4R3F8 94 aa3.68□□□□□ -1.82
CTNNA1-244ENST00000627109 KRTAP10-6P60371 365 aaPredicted RBP3.64□□□□□ -1.83
CTNNA1-244ENST00000627109 UBR4Q5T4S7 5183 aa3.61□□□□□ -1.83
CTNNA1-244ENST00000627109 LPAP08519 4548 aa3.6□□□□□ -1.83
CTNNA1-244ENST00000627109 TPRXLQ17RH7 258 aa3.6□□□□□ -1.83
CTNNA1-244ENST00000627109 RNF213Q63HN8 5207 aa3.59□□□□□ -1.84
CTNNA1-244ENST00000627109 HMCN2Q8NDA2 5059 aa3.56□□□□□ -1.84
CTNNA1-244ENST00000627109 KRTAP13-4Q3LI77 160 aa3.56□□□□□ -1.84
CTNNA1-244ENST00000627109 MUC2Q02817 5179 aa3.54□□□□□ -1.84
CTNNA1-244ENST00000627109 KRTAP15-1Q3LI76 137 aa3.52□□□□□ -1.85
CTNNA1-244ENST00000627109 C10orf95Q9H7T3 257 aa3.52□□□□□ -1.85
CTNNA1-244ENST00000627109 MUC17Q685J3 4493 aa3.52□□□□□ -1.85
CTNNA1-244ENST00000627109 M0QZ58 72 aa3.5□□□□□ -1.85
CTNNA1-244ENST00000627109 M0R2T5 61 aa3.48□□□□□ -1.85
CTNNA1-244ENST00000627109 PRO2289Q9P1D8 64 aa3.47□□□□□ -1.85
CTNNA1-244ENST00000627109 KRTAP12-2P59991 146 aa3.47□□□□□ -1.85
CTNNA1-244ENST00000627109 KRTAP19-2Q3LHN2 52 aa3.45□□□□□ -1.86
CTNNA1-244ENST00000627109 KRTAP12-1P59990 96 aa3.43□□□□□ -1.86
CTNNA1-244ENST00000627109 KRTAP4-1Q9BYQ7 146 aa3.43□□□□□ -1.86
CTNNA1-244ENST00000627109 FAT4Q6V0I7 4981 aa3.39□□□□□ -1.87
CTNNA1-244ENST00000627109 FLGP20930 4061 aaPredicted RBP3.34□□□□□ -1.88
CTNNA1-244ENST00000627109 PLAC4Q8WY50 150 aa3.33□□□□□ -1.88
CTNNA1-244ENST00000627109 FSIP2Q5CZC0 6907 aa3.27□□□□□ -1.89
CTNNA1-244ENST00000627109 PP632Q6XCG6 107 aa3.25□□□□□ -1.89
CTNNA1-244ENST00000627109 MT1HP80294 61 aa3.24□□□□□ -1.89
CTNNA1-244ENST00000627109 KRTAP10-10P60014 251 aa3.21□□□□□ -1.9
CTNNA1-244ENST00000627109 TNP1P09430 55 aa3.15□□□□□ -1.91
CTNNA1-244ENST00000627109 INE1O15225 51 aa3.14□□□□□ -1.91
CTNNA1-244ENST00000627109 SPRR2GQ9BYE4 73 aa3.13□□□□□ -1.91
CTNNA1-244ENST00000627109 LCE4AQ5TA78 99 aa3.1□□□□□ -1.91
CTNNA1-244ENST00000627109 KRTAP19-1Q8IUB9 90 aa3.08□□□□□ -1.92
CTNNA1-244ENST00000627109 MT2AP02795 61 aa3.08□□□□□ -1.92
CTNNA1-244ENST00000627109 MT1FP04733 61 aa3.06□□□□□ -1.92
CTNNA1-244ENST00000627109 KRTAP9-8Q9BYQ0 159 aa3.05□□□□□ -1.92
CTNNA1-244ENST00000627109 KRTAP19-4Q3LI73 84 aa3.04□□□□□ -1.92
CTNNA1-244ENST00000627109 KRTAP9-2Q9BYQ4 174 aa3.03□□□□□ -1.92
CTNNA1-244ENST00000627109 KRTAP19-8Q3LI54 63 aa3.02□□□□□ -1.93
CTNNA1-244ENST00000627109 USH2AO75445 5202 aa3.02□□□□□ -1.93
CTNNA1-244ENST00000627109 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
CTNNA1-244ENST00000627109 KRTAP9-6A0A140TA67 174 aa2.97□□□□□ -1.93
CTNNA1-244ENST00000627109 KRTAP9-7A8MTY7 169 aa2.97□□□□□ -1.93
CTNNA1-244ENST00000627109 KRTAP9-3Q9BYQ3 159 aa2.95□□□□□ -1.94
CTNNA1-244ENST00000627109 MT1BP07438 61 aa2.93□□□□□ -1.94
CTNNA1-244ENST00000627109 LCE3AQ5TA76 89 aa2.92□□□□□ -1.94
CTNNA1-244ENST00000627109 KRTAP10-5P60370 271 aa2.91□□□□□ -1.94
CTNNA1-244ENST00000627109 CRCT1Q9UGL9 99 aa2.91□□□□□ -1.94
CTNNA1-244ENST00000627109 MT1XP80297 61 aa2.9□□□□□ -1.95
CTNNA1-244ENST00000627109 KRTAP8-1Q8IUC2 63 aa2.89□□□□□ -1.95
CTNNA1-244ENST00000627109 KRTAP9-4Q9BYQ2 154 aa2.88□□□□□ -1.95
CTNNA1-244ENST00000627109 SSPOA2VEC9 5147 aa2.87□□□□□ -1.95
CTNNA1-244ENST00000627109 LCE3BQ5TA77 95 aa2.85□□□□□ -1.95
CTNNA1-244ENST00000627109 KRTAP10-12P60413 245 aa2.82□□□□□ -1.96
CTNNA1-244ENST00000627109 LCE3CQ5T5A8 94 aa2.81□□□□□ -1.96
CTNNA1-244ENST00000627109 KRTAP12-3P60328 96 aa2.8□□□□□ -1.96
CTNNA1-244ENST00000627109 KRTAP9-9Q9BYP9 154 aa2.79□□□□□ -1.96
CTNNA1-244ENST00000627109 FCGBPQ9Y6R7 5405 aaPredicted RBP2.79□□□□□ -1.96
CTNNA1-244ENST00000627109 LOC100996750A0A140TA64 210 aa2.78□□□□□ -1.96
CTNNA1-244ENST00000627109 KRTAP4-6Q9BYQ5 205 aa2.78□□□□□ -1.96
CTNNA1-244ENST00000627109 SYNE2Q8WXH0 6885 aaKnown RBP2.78□□□□□ -1.96
CTNNA1-244ENST00000627109 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms