RNA–Protein interactions for RNA: ENST00000625980.2

SPTAN1-211, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-211ENST00000625980 CHKB-CPT1BH3BT56 60 aa6.42□□□□□ -1.38
SPTAN1-211ENST00000625980 SMIM26A0A096LP01 95 aa6.39□□□□□ -1.39
SPTAN1-211ENST00000625980 LCA10Q71F78 164 aa6.36□□□□□ -1.39
SPTAN1-211ENST00000625980 S4R3F8 94 aa6.36□□□□□ -1.39
SPTAN1-211ENST00000625980 KRTAP3-3Q9BYR6 98 aa6.35□□□□□ -1.39
SPTAN1-211ENST00000625980 LCE2CQ5TA81 110 aa6.32□□□□□ -1.4
SPTAN1-211ENST00000625980 FLGP20930 4061 aaPredicted RBP6.29□□□□□ -1.4
SPTAN1-211ENST00000625980 SPTSSBQ8NFR3 76 aa6.27□□□□□ -1.41
SPTAN1-211ENST00000625980 FAT4Q6V0I7 4981 aa6.26□□□□□ -1.41
SPTAN1-211ENST00000625980 Q1T7F1 81 aa6.22□□□□□ -1.41
SPTAN1-211ENST00000625980 CSAG1Q6PB30 78 aa6.21□□□□□ -1.42
SPTAN1-211ENST00000625980 LINC01558Q9Y6Z2 57 aa6.21□□□□□ -1.42
SPTAN1-211ENST00000625980 MT1HP80294 61 aa6.18□□□□□ -1.42
SPTAN1-211ENST00000625980 V9GYY9 64 aa6.18□□□□□ -1.42
SPTAN1-211ENST00000625980 PSPHP1O15172 72 aa6.15□□□□□ -1.42
SPTAN1-211ENST00000625980 PRR15LQ9BU68 103 aa6.15□□□□□ -1.42
SPTAN1-211ENST00000625980 A0A1B0GU69 56 aa6.13□□□□□ -1.43
SPTAN1-211ENST00000625980 KRTAP3-2Q9BYR7 98 aa6.11□□□□□ -1.43
SPTAN1-211ENST00000625980 M0R2T5 61 aa6.1□□□□□ -1.43
SPTAN1-211ENST00000625980 Q5VV11 94 aa6.09□□□□□ -1.43
SPTAN1-211ENST00000625980 SEC61GP60059 68 aa6.08□□□□□ -1.44
SPTAN1-211ENST00000625980 ADM2Q7Z4H4 148 aa6.08□□□□□ -1.44
SPTAN1-211ENST00000625980 KRTAP10-6P60371 365 aaPredicted RBP6.08□□□□□ -1.44
SPTAN1-211ENST00000625980 P0C880 135 aa6.06□□□□□ -1.44
SPTAN1-211ENST00000625980 H0YAA0 97 aa6.05□□□□□ -1.44
SPTAN1-211ENST00000625980 BRK1Q8WUW1 75 aa6.01□□□□□ -1.45
SPTAN1-211ENST00000625980 LCE2AQ5TA79 106 aaPredicted RBP5.99□□□□□ -1.45
SPTAN1-211ENST00000625980 A0A1B0GU33 70 aa5.97□□□□□ -1.45
SPTAN1-211ENST00000625980 LORP23490 312 aaPredicted RBP5.96□□□□□ -1.45
SPTAN1-211ENST00000625980 KRTAP9-8Q9BYQ0 159 aa5.95□□□□□ -1.46
SPTAN1-211ENST00000625980 A6NED7 52 aa5.94□□□□□ -1.46
SPTAN1-211ENST00000625980 MT2AP02795 61 aa5.93□□□□□ -1.46
SPTAN1-211ENST00000625980 KRTAP13-4Q3LI77 160 aa5.93□□□□□ -1.46
SPTAN1-211ENST00000625980 PRO0628Q9UI54 55 aa5.92□□□□□ -1.46
SPTAN1-211ENST00000625980 UQCR11O14957 56 aa5.91□□□□□ -1.46
SPTAN1-211ENST00000625980 SPATA8Q6RVD6 105 aa5.91□□□□□ -1.46
SPTAN1-211ENST00000625980 MT1FP04733 61 aa5.9□□□□□ -1.47
SPTAN1-211ENST00000625980 A8MU10 97 aa5.86□□□□□ -1.47
SPTAN1-211ENST00000625980 KRTAP10-10P60014 251 aa5.86□□□□□ -1.47
SPTAN1-211ENST00000625980 MIR22HGQ0VDD5 57 aa5.86□□□□□ -1.47
SPTAN1-211ENST00000625980 M0QZ58 72 aa5.85□□□□□ -1.47
SPTAN1-211ENST00000625980 R4GN34 69 aa5.85□□□□□ -1.47
SPTAN1-211ENST00000625980 CDC42SE1Q9NRR8 79 aa5.84□□□□□ -1.47
SPTAN1-211ENST00000625980 A0A0D9SG42 100 aa5.79□□□□□ -1.48
SPTAN1-211ENST00000625980 CRIPTQ9P021 101 aa5.79□□□□□ -1.48
SPTAN1-211ENST00000625980 LINC01554Q52M75 96 aa5.77□□□□□ -1.49
SPTAN1-211ENST00000625980 KRTAP19-1Q8IUB9 90 aa5.77□□□□□ -1.49
SPTAN1-211ENST00000625980 SPRR2GQ9BYE4 73 aa5.74□□□□□ -1.49
SPTAN1-211ENST00000625980 KRTAP9-3Q9BYQ3 159 aa5.74□□□□□ -1.49
SPTAN1-211ENST00000625980 KRTAP12-1P59990 96 aa5.67□□□□□ -1.5
SPTAN1-211ENST00000625980 PMAIP1Q13794 54 aa5.67□□□□□ -1.5
SPTAN1-211ENST00000625980 KRTAP12-2P59991 146 aa5.66□□□□□ -1.5
SPTAN1-211ENST00000625980 SPINT4Q6UDR6 99 aa5.65□□□□□ -1.51
SPTAN1-211ENST00000625980 KRTAP19-8Q3LI54 63 aa5.61□□□□□ -1.51
SPTAN1-211ENST00000625980 A6NN06 94 aa5.6□□□□□ -1.51
SPTAN1-211ENST00000625980 LCE2BO14633 110 aa5.6□□□□□ -1.51
SPTAN1-211ENST00000625980 K7ERS5 55 aa5.57□□□□□ -1.52
SPTAN1-211ENST00000625980 MT1BP07438 61 aa5.57□□□□□ -1.52
SPTAN1-211ENST00000625980 PLAC4Q8WY50 150 aa5.52□□□□□ -1.53
SPTAN1-211ENST00000625980 USH2AO75445 5202 aa5.47□□□□□ -1.53
SPTAN1-211ENST00000625980 CAMK2N1Q7Z7J9 78 aa5.47□□□□□ -1.53
SPTAN1-211ENST00000625980 KTN1-AS1Q86SY8 53 aa5.47□□□□□ -1.53
SPTAN1-211ENST00000625980 LCE2DQ5TA82 110 aaPredicted RBP5.45□□□□□ -1.54
SPTAN1-211ENST00000625980 C10orf95Q9H7T3 257 aa5.38□□□□□ -1.55
SPTAN1-211ENST00000625980 ROMO1P60602 79 aa5.37□□□□□ -1.55
SPTAN1-211ENST00000625980 MT1XP80297 61 aa5.37□□□□□ -1.55
SPTAN1-211ENST00000625980 KRTAP10-5P60370 271 aa5.35□□□□□ -1.55
SPTAN1-211ENST00000625980 PRAC1Q96KF2 57 aa5.33□□□□□ -1.56
SPTAN1-211ENST00000625980 SSPOA2VEC9 5147 aa5.31□□□□□ -1.56
SPTAN1-211ENST00000625980 KRTAP9-2Q9BYQ4 174 aa5.29□□□□□ -1.56
SPTAN1-211ENST00000625980 FSIP2Q5CZC0 6907 aa5.25□□□□□ -1.57
SPTAN1-211ENST00000625980 PRO2289Q9P1D8 64 aa5.25□□□□□ -1.57
SPTAN1-211ENST00000625980 KRTAP19-6Q3LI70 58 aa5.24□□□□□ -1.57
SPTAN1-211ENST00000625980 TNP1P09430 55 aa5.18□□□□□ -1.58
SPTAN1-211ENST00000625980 KRTAP25-1Q3LHN0 102 aa5.17□□□□□ -1.58
SPTAN1-211ENST00000625980 KRTAP10-7P60409 375 aaPredicted RBP5.16□□□□□ -1.58
SPTAN1-211ENST00000625980 FCGBPQ9Y6R7 5405 aaPredicted RBP5.1□□□□□ -1.59
SPTAN1-211ENST00000625980 CRCT1Q9UGL9 99 aa5.09□□□□□ -1.6
SPTAN1-211ENST00000625980 KRTAP10-12P60413 245 aa5.07□□□□□ -1.6
SPTAN1-211ENST00000625980 LCE3AQ5TA76 89 aa5.03□□□□□ -1.6
SPTAN1-211ENST00000625980 H3BS24 57 aa5.01□□□□□ -1.61
SPTAN1-211ENST00000625980 KRTAP4-8A0A0G2JLE6 195 aa4.99□□□□□ -1.61
SPTAN1-211ENST00000625980 KMT2DO14686 5537 aa4.99□□□□□ -1.61
SPTAN1-211ENST00000625980 KRTAP4-8Q9BYQ9 185 aa4.99□□□□□ -1.61
SPTAN1-211ENST00000625980 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
SPTAN1-211ENST00000625980 PP632Q6XCG6 107 aa4.95□□□□□ -1.62
SPTAN1-211ENST00000625980 A0A0A0MQY5 61 aa4.94□□□□□ -1.62
SPTAN1-211ENST00000625980 KRTAP9-6A0A140TA67 174 aa4.93□□□□□ -1.62
SPTAN1-211ENST00000625980 KRTAP8-1Q8IUC2 63 aa4.88□□□□□ -1.63
SPTAN1-211ENST00000625980 KRTAP19-5Q3LI72 72 aa4.83□□□□□ -1.64
SPTAN1-211ENST00000625980 MACF1Q9UPN3 7388 aaKnown RBP4.81□□□□□ -1.64
SPTAN1-211ENST00000625980 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
SPTAN1-211ENST00000625980 KRTAP19-7Q3SYF9 63 aa4.78□□□□□ -1.64
SPTAN1-211ENST00000625980 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.72□□□□□ -1.65
SPTAN1-211ENST00000625980 MT1EP04732 61 aa4.7□□□□□ -1.66
SPTAN1-211ENST00000625980 SYNE2Q8WXH0 6885 aaKnown RBP4.68□□□□□ -1.66
SPTAN1-211ENST00000625980 KRTAP15-1Q3LI76 137 aa4.68□□□□□ -1.66
SPTAN1-211ENST00000625980 SPRR2FQ96RM1 72 aa4.66□□□□□ -1.66
SPTAN1-211ENST00000625980 MUC12Q9UKN1 5478 aa4.64□□□□□ -1.67
SPTAN1-211ENST00000625980 KRTAP5-9P26371 169 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms