RNA–Protein interactions for RNA: ENST00000625980.2

SPTAN1-211, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-211ENST00000625980 NISCHQ9Y2I1 1504 aa29.62■■■□□ 2.33
SPTAN1-211ENST00000625980 CCDC180Q9P1Z9 1646 aa25.84■■□□□ 1.73
SPTAN1-211ENST00000625980 ZCCHC6Q5VYS8 1495 aaKnown RBP24.83■■□□□ 1.57
SPTAN1-211ENST00000625980 ABCC9O60706 1549 aa24.7■■□□□ 1.54
SPTAN1-211ENST00000625980 DCAF8L2P0C7V8 631 aa24.58■■□□□ 1.53
SPTAN1-211ENST00000625980 DCAF1Q9Y4B6 1507 aa24.45■■□□□ 1.5
SPTAN1-211ENST00000625980 MYO15BQ96JP2 1530 aa24.21■■□□□ 1.47
SPTAN1-211ENST00000625980 NACADO15069 1562 aa24.14■■□□□ 1.45
SPTAN1-211ENST00000625980 SHROOM4Q9ULL8 1493 aa24.11■■□□□ 1.45
SPTAN1-211ENST00000625980 RB1CC1Q8TDY2 1594 aa23.98■■□□□ 1.43
SPTAN1-211ENST00000625980 SCRIBQ14160 1630 aa23.82■■□□□ 1.4
SPTAN1-211ENST00000625980 UNC13AQ9UPW8 1703 aa23.49■■□□□ 1.35
SPTAN1-211ENST00000625980 BICRAQ9NZM4 1560 aa23.3■■□□□ 1.32
SPTAN1-211ENST00000625980 PABPN1Q86U42 306 aaKnown RBP eCLIP23.3■■□□□ 1.32
SPTAN1-211ENST00000625980 SUPT5HO00267 1087 aaKnown RBP23.11■■□□□ 1.29
SPTAN1-211ENST00000625980 CECR2Q9BXF3 1484 aa23.08■■□□□ 1.28
SPTAN1-211ENST00000625980 RSF1Q96T23 1441 aaPredicted RBP22.93■■□□□ 1.26
SPTAN1-211ENST00000625980 MROH2BQ7Z745 1585 aa22.9■■□□□ 1.26
SPTAN1-211ENST00000625980 BAZ1AQ9NRL2 1556 aaPredicted RBP22.86■■□□□ 1.25
SPTAN1-211ENST00000625980 SMARCA4P51532 1647 aa22.79■■□□□ 1.24
SPTAN1-211ENST00000625980 WIZO95785 1651 aa22.69■■□□□ 1.22
SPTAN1-211ENST00000625980 EIF4G1Q04637 1599 aaKnown RBP22.59■■□□□ 1.21
SPTAN1-211ENST00000625980 PEG3Q9GZU2 1588 aa22.5■■□□□ 1.19
SPTAN1-211ENST00000625980 ATAD2BQ9ULI0 1458 aa22.49■■□□□ 1.19
SPTAN1-211ENST00000625980 SMARCA2P51531 1590 aa22.43■■□□□ 1.18
SPTAN1-211ENST00000625980 TOP2AP11388 1531 aaKnown RBP22.43■■□□□ 1.18
SPTAN1-211ENST00000625980 BAZ1BQ9UIG0 1483 aaKnown RBP22.34■■□□□ 1.17
SPTAN1-211ENST00000625980 CC2D2AQ9P2K1 1620 aa22.32■■□□□ 1.16
SPTAN1-211ENST00000625980 NCAPD3P42695 1498 aa22.3■■□□□ 1.16
SPTAN1-211ENST00000625980 HMGXB3Q12766 1538 aa22.23■■□□□ 1.15
SPTAN1-211ENST00000625980 CCDC88BA6NC98 1476 aa22.23■■□□□ 1.15
SPTAN1-211ENST00000625980 CHIC1Q5VXU3 224 aa22.02■■□□□ 1.12
SPTAN1-211ENST00000625980 DNAJC5BQ9UF47 199 aa22■■□□□ 1.11
SPTAN1-211ENST00000625980 CFTRP13569 1480 aa21.77■■□□□ 1.08
SPTAN1-211ENST00000625980 CADPSQ9ULU8 1353 aa21.74■■□□□ 1.07
SPTAN1-211ENST00000625980 ABCC8Q09428 1581 aa21.71■■□□□ 1.07
SPTAN1-211ENST00000625980 TRIM41Q8WV44 630 aa21.7■■□□□ 1.06
SPTAN1-211ENST00000625980 NESP48681 1621 aa21.64■■□□□ 1.05
SPTAN1-211ENST00000625980 WRNQ14191 1432 aaPredicted RBP eCLIP21.57■■□□□ 1.04
SPTAN1-211ENST00000625980 PRDM2Q13029 1718 aa21.57■■□□□ 1.04
SPTAN1-211ENST00000625980 LAMC3Q9Y6N6 1575 aa21.55■■□□□ 1.04
SPTAN1-211ENST00000625980 FANCD2Q9BXW9 1451 aa21.5■■□□□ 1.03
SPTAN1-211ENST00000625980 SYNJ1O43426 1573 aa21.5■■□□□ 1.03
SPTAN1-211ENST00000625980 CUX1P39880 1505 aa21.42■■□□□ 1.02
SPTAN1-211ENST00000625980 PDS5BQ9NTI5 1447 aa21.41■■□□□ 1.02
SPTAN1-211ENST00000625980 TOP2BQ02880 1626 aa21.39■■□□□ 1.02
SPTAN1-211ENST00000625980 BIVM-ERCC5R4GMW8 1640 aa21.36■■□□□ 1.01
SPTAN1-211ENST00000625980 CEP164Q9UPV0 1460 aa21.36■■□□□ 1.01
SPTAN1-211ENST00000625980 FAM9AQ8IZU1 332 aaPredicted RBP21.35■■□□□ 1.01
SPTAN1-211ENST00000625980 KIF21AQ7Z4S6 1674 aa21.32■■□□□ 1
SPTAN1-211ENST00000625980 SOGA1O94964 1423 aa21.29■■□□□ 1
SPTAN1-211ENST00000625980 URB2Q14146 1524 aaKnown RBP21.26■□□□□ 0.99
SPTAN1-211ENST00000625980 DNMBPQ6XZF7 1577 aa21.25■□□□□ 0.99
SPTAN1-211ENST00000625980 TOPBP1Q92547 1522 aa21.25■□□□□ 0.99
SPTAN1-211ENST00000625980 RUSC2Q8N2Y8 1516 aa21.23■□□□□ 0.99
SPTAN1-211ENST00000625980 LOC105371045A0A1W2PR82 267 aa21.21■□□□□ 0.99
SPTAN1-211ENST00000625980 FGD5Q6ZNL6 1462 aa21.21■□□□□ 0.99
SPTAN1-211ENST00000625980 ERCC6Q03468 1493 aa21.16■□□□□ 0.98
SPTAN1-211ENST00000625980 MRC2Q9UBG0 1479 aa21.15■□□□□ 0.98
SPTAN1-211ENST00000625980 POLA1P09884 1462 aaPredicted RBP21.13■□□□□ 0.97
SPTAN1-211ENST00000625980 EEA1Q15075 1411 aa21.12■□□□□ 0.97
SPTAN1-211ENST00000625980 RAD54L2Q9Y4B4 1467 aa21.1■□□□□ 0.97
SPTAN1-211ENST00000625980 CSRNP3Q8WYN3 585 aa21.09■□□□□ 0.97
SPTAN1-211ENST00000625980 EHMT2Q96KQ7 1210 aa21.09■□□□□ 0.97
SPTAN1-211ENST00000625980 CUX2O14529 1486 aa21.05■□□□□ 0.96
SPTAN1-211ENST00000625980 WDR62O43379 1518 aa21.04■□□□□ 0.96
SPTAN1-211ENST00000625980 KIF27Q86VH2 1401 aa21.03■□□□□ 0.96
SPTAN1-211ENST00000625980 THOC2Q8NI27 1593 aaKnown RBP21.02■□□□□ 0.96
SPTAN1-211ENST00000625980 ABCA10Q8WWZ4 1543 aa21■□□□□ 0.95
SPTAN1-211ENST00000625980 TARBP1Q13395 1621 aaKnown RBP20.93■□□□□ 0.94
SPTAN1-211ENST00000625980 WDR97A6NE52 1622 aa20.92■□□□□ 0.94
SPTAN1-211ENST00000625980 IGF1RP08069 1367 aa20.9■□□□□ 0.94
SPTAN1-211ENST00000625980 TDRD9Q8NDG6 1382 aaKnown RBP20.9■□□□□ 0.94
SPTAN1-211ENST00000625980 KIF21BO75037 1637 aa20.87■□□□□ 0.93
SPTAN1-211ENST00000625980 IFT140Q96RY7 1462 aa20.86■□□□□ 0.93
SPTAN1-211ENST00000625980 PRXQ9BXM0 1461 aa20.86■□□□□ 0.93
SPTAN1-211ENST00000625980 GOLGA3Q08378 1498 aa20.85■□□□□ 0.93
SPTAN1-211ENST00000625980 RAPGEF2Q9Y4G8 1499 aa20.84■□□□□ 0.93
SPTAN1-211ENST00000625980 ABCA5Q8WWZ7 1642 aa20.83■□□□□ 0.93
SPTAN1-211ENST00000625980 GAPVD1Q14C86 1478 aa20.82■□□□□ 0.92
SPTAN1-211ENST00000625980 ZNF608Q9ULD9 1512 aaPredicted RBP20.81■□□□□ 0.92
SPTAN1-211ENST00000625980 UBTFP17480 764 aaKnown RBP20.81■□□□□ 0.92
SPTAN1-211ENST00000625980 AQRO60306 1485 aaKnown RBP eCLIP20.8■□□□□ 0.92
SPTAN1-211ENST00000625980 CARMIL1Q5VZK9 1371 aa20.78■□□□□ 0.92
SPTAN1-211ENST00000625980 TNIKQ9UKE5 1360 aa20.77■□□□□ 0.92
SPTAN1-211ENST00000625980 ERICH3Q5RHP9 1530 aa20.76■□□□□ 0.91
SPTAN1-211ENST00000625980 CUL7Q14999 1698 aa20.68■□□□□ 0.9
SPTAN1-211ENST00000625980 EIF4G3O43432 1585 aaKnown RBP20.68■□□□□ 0.9
SPTAN1-211ENST00000625980 PBRM1Q86U86 1689 aa20.68■□□□□ 0.9
SPTAN1-211ENST00000625980 GRIN2BQ13224 1484 aa20.68■□□□□ 0.9
SPTAN1-211ENST00000625980 CEP162Q5TB80 1403 aa20.65■□□□□ 0.9
SPTAN1-211ENST00000625980 FHAD1B1AJZ9 1412 aa20.59■□□□□ 0.89
SPTAN1-211ENST00000625980 SNAPC4Q5SXM2 1469 aa20.58■□□□□ 0.88
SPTAN1-211ENST00000625980 RANGAP1P46060 587 aaPredicted RBP20.58■□□□□ 0.88
SPTAN1-211ENST00000625980 ADAMTS12P58397 1594 aa20.58■□□□□ 0.88
SPTAN1-211ENST00000625980 CLIP1P30622 1438 aa20.53■□□□□ 0.88
SPTAN1-211ENST00000625980 MAGI1Q96QZ7 1491 aaPredicted RBP20.5■□□□□ 0.87
SPTAN1-211ENST00000625980 SYNJ2O15056 1496 aa20.44■□□□□ 0.86
SPTAN1-211ENST00000625980 CHMP7Q8WUX9 453 aaPredicted RBP20.43■□□□□ 0.86
SPTAN1-211ENST00000625980 GRIN2AQ12879 1464 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms