RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 DMBT1Q9UGM3 2413 aaPredicted RBP6.46□□□□□ -1.37
ATRX-213ENST00000624032 IGKV2D-30A0A075B6S6 120 aa6.41□□□□□ -1.38
ATRX-213ENST00000624032 KRTAP16-1A8MUX0 517 aa6.4□□□□□ -1.38
ATRX-213ENST00000624032 RPS29P62273 56 aaKnown RBP6.4□□□□□ -1.39
ATRX-213ENST00000624032 PCLOQ9Y6V0 5065 aa6.38□□□□□ -1.39
ATRX-213ENST00000624032 CSAG1Q6PB30 78 aa6.37□□□□□ -1.39
ATRX-213ENST00000624032 J3QL48 77 aa6.36□□□□□ -1.39
ATRX-213ENST00000624032 C9orf92A6NGG3 77 aa6.28□□□□□ -1.4
ATRX-213ENST00000624032 H3BS24 57 aa6.24□□□□□ -1.41
ATRX-213ENST00000624032 A8MUU9 505 aa6.22□□□□□ -1.41
ATRX-213ENST00000624032 H0YAA0 97 aa6.22□□□□□ -1.41
ATRX-213ENST00000624032 HERC1Q15751 4861 aa6.2□□□□□ -1.42
ATRX-213ENST00000624032 LPAP08519 4548 aa6.17□□□□□ -1.42
ATRX-213ENST00000624032 KRTAP25-1Q3LHN0 102 aa6.17□□□□□ -1.42
ATRX-213ENST00000624032 A0A1B0GU33 70 aa6.17□□□□□ -1.42
ATRX-213ENST00000624032 H1FX-AS1Q4G0G2 97 aa6.12□□□□□ -1.43
ATRX-213ENST00000624032 XP32Q5T750 250 aa6.12□□□□□ -1.43
ATRX-213ENST00000624032 TPRXLQ17RH7 258 aa6.11□□□□□ -1.43
ATRX-213ENST00000624032 C20orf166-AS1Q96NR2 134 aa6.1□□□□□ -1.43
ATRX-213ENST00000624032 LRP2P98164 4655 aa6.09□□□□□ -1.43
ATRX-213ENST00000624032 ROMO1P60602 79 aa6.08□□□□□ -1.44
ATRX-213ENST00000624032 KRTAP3-1Q9BYR8 98 aa6.08□□□□□ -1.44
ATRX-213ENST00000624032 HMCN2Q8NDA2 5059 aa6.07□□□□□ -1.44
ATRX-213ENST00000624032 K7ERS5 55 aa6.07□□□□□ -1.44
ATRX-213ENST00000624032 RPL37P61927 97 aaKnown RBP6.05□□□□□ -1.44
ATRX-213ENST00000624032 COX6B2Q6YFQ2 88 aa6□□□□□ -1.45
ATRX-213ENST00000624032 CRIPTQ9P021 101 aa6□□□□□ -1.45
ATRX-213ENST00000624032 SEC61BP60468 96 aaKnown RBP5.9□□□□□ -1.46
ATRX-213ENST00000624032 KRTAP4-1Q9BYQ7 146 aa5.89□□□□□ -1.47
ATRX-213ENST00000624032 P0C880 135 aa5.88□□□□□ -1.47
ATRX-213ENST00000624032 MUC17Q685J3 4493 aa5.87□□□□□ -1.47
ATRX-213ENST00000624032 UBR4Q5T4S7 5183 aa5.85□□□□□ -1.47
ATRX-213ENST00000624032 KRTAP10-6P60371 365 aaPredicted RBP5.85□□□□□ -1.47
ATRX-213ENST00000624032 A0A0D9SG42 100 aa5.83□□□□□ -1.48
ATRX-213ENST00000624032 KRTAP13-4Q3LI77 160 aa5.82□□□□□ -1.48
ATRX-213ENST00000624032 MUC2Q02817 5179 aa5.82□□□□□ -1.48
ATRX-213ENST00000624032 SPINT4Q6UDR6 99 aa5.81□□□□□ -1.48
ATRX-213ENST00000624032 KRTAP3-3Q9BYR6 98 aa5.8□□□□□ -1.48
ATRX-213ENST00000624032 KRTAP3-2Q9BYR7 98 aa5.78□□□□□ -1.48
ATRX-213ENST00000624032 RNF213Q63HN8 5207 aa5.78□□□□□ -1.48
ATRX-213ENST00000624032 C10orf95Q9H7T3 257 aa5.73□□□□□ -1.49
ATRX-213ENST00000624032 S4R3F8 94 aa5.73□□□□□ -1.49
ATRX-213ENST00000624032 KRTAP15-1Q3LI76 137 aa5.68□□□□□ -1.5
ATRX-213ENST00000624032 KRTAP19-2Q3LHN2 52 aa5.67□□□□□ -1.5
ATRX-213ENST00000624032 KRTAP12-2P59991 146 aa5.66□□□□□ -1.5
ATRX-213ENST00000624032 NDUFAF8A1L188 74 aa5.64□□□□□ -1.51
ATRX-213ENST00000624032 KRTAP12-1P59990 96 aa5.61□□□□□ -1.51
ATRX-213ENST00000624032 LCE2CQ5TA81 110 aa5.59□□□□□ -1.51
ATRX-213ENST00000624032 FAT4Q6V0I7 4981 aa5.59□□□□□ -1.52
ATRX-213ENST00000624032 M0QZ58 72 aa5.54□□□□□ -1.52
ATRX-213ENST00000624032 FLGP20930 4061 aaPredicted RBP5.51□□□□□ -1.53
ATRX-213ENST00000624032 MT1HP80294 61 aa5.48□□□□□ -1.53
ATRX-213ENST00000624032 M0R2T5 61 aa5.43□□□□□ -1.54
ATRX-213ENST00000624032 R4GN34 69 aa5.34□□□□□ -1.55
ATRX-213ENST00000624032 PLAC4Q8WY50 150 aa5.33□□□□□ -1.56
ATRX-213ENST00000624032 LCE2AQ5TA79 106 aaPredicted RBP5.32□□□□□ -1.56
ATRX-213ENST00000624032 KRTAP9-8Q9BYQ0 159 aa5.26□□□□□ -1.57
ATRX-213ENST00000624032 LORP23490 312 aaPredicted RBP5.25□□□□□ -1.57
ATRX-213ENST00000624032 MT2AP02795 61 aa5.24□□□□□ -1.57
ATRX-213ENST00000624032 MT1FP04733 61 aa5.22□□□□□ -1.57
ATRX-213ENST00000624032 KRTAP10-10P60014 251 aa5.2□□□□□ -1.58
ATRX-213ENST00000624032 PP632Q6XCG6 107 aa5.18□□□□□ -1.58
ATRX-213ENST00000624032 LUZP6Q538Z0 58 aa5.17□□□□□ -1.58
ATRX-213ENST00000624032 CAMK2N1Q7Z7J9 78 aa5.12□□□□□ -1.59
ATRX-213ENST00000624032 A0A0A0MQY5 61 aa5.1□□□□□ -1.59
ATRX-213ENST00000624032 KRTAP19-1Q8IUB9 90 aa5.07□□□□□ -1.6
ATRX-213ENST00000624032 KRTAP9-3Q9BYQ3 159 aa5.07□□□□□ -1.6
ATRX-213ENST00000624032 SPRR2GQ9BYE4 73 aa5.03□□□□□ -1.6
ATRX-213ENST00000624032 LCE2BO14633 110 aa4.98□□□□□ -1.61
ATRX-213ENST00000624032 TNP1P09430 55 aa4.95□□□□□ -1.62
ATRX-213ENST00000624032 KRTAP23-1A1A580 65 aa4.93□□□□□ -1.62
ATRX-213ENST00000624032 KRTAP19-8Q3LI54 63 aa4.92□□□□□ -1.62
ATRX-213ENST00000624032 SPRR5A0A1B0GTR4 108 aa4.91□□□□□ -1.62
ATRX-213ENST00000624032 MT1BP07438 61 aa4.91□□□□□ -1.62
ATRX-213ENST00000624032 USH2AO75445 5202 aa4.9□□□□□ -1.63
ATRX-213ENST00000624032 LCE2DQ5TA82 110 aaPredicted RBP4.84□□□□□ -1.63
ATRX-213ENST00000624032 FSIP2Q5CZC0 6907 aa4.83□□□□□ -1.64
ATRX-213ENST00000624032 KRTAP9-2Q9BYQ4 174 aa4.77□□□□□ -1.65
ATRX-213ENST00000624032 SSPOA2VEC9 5147 aa4.77□□□□□ -1.65
ATRX-213ENST00000624032 MT1XP80297 61 aa4.72□□□□□ -1.65
ATRX-213ENST00000624032 KRTAP10-5P60370 271 aa4.71□□□□□ -1.66
ATRX-213ENST00000624032 KRTAP19-6Q3LI70 58 aa4.64□□□□□ -1.67
ATRX-213ENST00000624032 LCE3AQ5TA76 89 aa4.64□□□□□ -1.67
ATRX-213ENST00000624032 PRO2289Q9P1D8 64 aa4.61□□□□□ -1.67
ATRX-213ENST00000624032 CRCT1Q9UGL9 99 aa4.57□□□□□ -1.68
ATRX-213ENST00000624032 FCGBPQ9Y6R7 5405 aaPredicted RBP4.57□□□□□ -1.68
ATRX-213ENST00000624032 KRTAP10-7P60409 375 aaPredicted RBP4.55□□□□□ -1.68
ATRX-213ENST00000624032 INE1O15225 51 aa4.54□□□□□ -1.68
ATRX-213ENST00000624032 KRTAP8-1Q8IUC2 63 aa4.53□□□□□ -1.68
ATRX-213ENST00000624032 KMT2DO14686 5537 aa4.46□□□□□ -1.7
ATRX-213ENST00000624032 KRTAP10-12P60413 245 aa4.44□□□□□ -1.7
ATRX-213ENST00000624032 KRTAP4-8A0A0G2JLE6 195 aa4.43□□□□□ -1.7
ATRX-213ENST00000624032 KRTAP9-6A0A140TA67 174 aa4.43□□□□□ -1.7
ATRX-213ENST00000624032 KRTAP4-8Q9BYQ9 185 aa4.43□□□□□ -1.7
ATRX-213ENST00000624032 KRTAP12-3P60328 96 aa4.42□□□□□ -1.7
ATRX-213ENST00000624032 MACF1Q9UPN3 7388 aaKnown RBP4.36□□□□□ -1.71
ATRX-213ENST00000624032 SYNE2Q8WXH0 6885 aaKnown RBP4.28□□□□□ -1.73
ATRX-213ENST00000624032 KRTAP19-5Q3LI72 72 aa4.25□□□□□ -1.73
ATRX-213ENST00000624032 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.24□□□□□ -1.73
ATRX-213ENST00000624032 KRTAP19-7Q3SYF9 63 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms