RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 MT1HP80294 61 aa2.49□□□□□ -2.01
CDKL5-205ENST00000623535 BSNQ9UPA5 3926 aa2.47□□□□□ -2.01
CDKL5-205ENST00000623535 LCE2CQ5TA81 110 aa2.45□□□□□ -2.02
CDKL5-205ENST00000623535 SPRR5A0A1B0GTR4 108 aa2.43□□□□□ -2.02
CDKL5-205ENST00000623535 SMG1Q96Q15 3661 aaKnown RBP2.42□□□□□ -2.02
CDKL5-205ENST00000623535 CSMD2Q7Z408 3487 aa2.41□□□□□ -2.02
CDKL5-205ENST00000623535 LCE2DQ5TA82 110 aaPredicted RBP2.4□□□□□ -2.03
CDKL5-205ENST00000623535 KRTAP3-3Q9BYR6 98 aa2.4□□□□□ -2.03
CDKL5-205ENST00000623535 SPRR2GQ9BYE4 73 aa2.39□□□□□ -2.03
CDKL5-205ENST00000623535 KRTAP3-2Q9BYR7 98 aa2.39□□□□□ -2.03
CDKL5-205ENST00000623535 MT2AP02795 61 aa2.38□□□□□ -2.03
CDKL5-205ENST00000623535 LAMA5O15230 3695 aa2.38□□□□□ -2.03
CDKL5-205ENST00000623535 CSMD1Q96PZ7 3565 aa2.37□□□□□ -2.03
CDKL5-205ENST00000623535 KRTAP19-5Q3LI72 72 aa2.36□□□□□ -2.03
CDKL5-205ENST00000623535 LCE3CQ5T5A8 94 aa2.35□□□□□ -2.03
CDKL5-205ENST00000623535 TRRAPQ9Y4A5 3859 aa2.34□□□□□ -2.03
CDKL5-205ENST00000623535 SVEP1Q4LDE5 3571 aa2.33□□□□□ -2.04
CDKL5-205ENST00000623535 LOC400499M0QZD8 3231 aa2.32□□□□□ -2.04
CDKL5-205ENST00000623535 AKAP9Q99996 3911 aa2.32□□□□□ -2.04
CDKL5-205ENST00000623535 LCE3BQ5TA77 95 aa2.3□□□□□ -2.04
CDKL5-205ENST00000623535 MT1GP13640 62 aa2.28□□□□□ -2.04
CDKL5-205ENST00000623535 MT1FP04733 61 aa2.27□□□□□ -2.05
CDKL5-205ENST00000623535 KRTAP20-1Q3LI63 56 aa2.27□□□□□ -2.05
CDKL5-205ENST00000623535 KRTAP9-6A0A140TA67 174 aa2.24□□□□□ -2.05
CDKL5-205ENST00000623535 CUBNO60494 3623 aa2.23□□□□□ -2.05
CDKL5-205ENST00000623535 VPS13CQ709C8 3753 aa2.23□□□□□ -2.05
CDKL5-205ENST00000623535 DNAH2Q9P225 4427 aa2.22□□□□□ -2.05
CDKL5-205ENST00000623535 KRTAP19-1Q8IUB9 90 aa2.22□□□□□ -2.05
CDKL5-205ENST00000623535 DNAH7Q8WXX0 4024 aa2.22□□□□□ -2.05
CDKL5-205ENST00000623535 KRTAP9-2Q9BYQ4 174 aa2.21□□□□□ -2.06
CDKL5-205ENST00000623535 MT4P47944 62 aa2.21□□□□□ -2.06
CDKL5-205ENST00000623535 LCE3DQ9BYE3 92 aa2.2□□□□□ -2.06
CDKL5-205ENST00000623535 DNAH10Q8IVF4 4471 aa2.19□□□□□ -2.06
CDKL5-205ENST00000623535 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
CDKL5-205ENST00000623535 VPS13BQ7Z7G8 4022 aa2.18□□□□□ -2.06
CDKL5-205ENST00000623535 FRAS1Q86XX4 4008 aa2.18□□□□□ -2.06
CDKL5-205ENST00000623535 ZNF469Q96JG9 3925 aaPredicted RBP2.18□□□□□ -2.06
CDKL5-205ENST00000623535 KRTAP4-1Q9BYQ7 146 aa2.17□□□□□ -2.06
CDKL5-205ENST00000623535 HECTD4Q9Y4D8 3996 aa2.17□□□□□ -2.06
CDKL5-205ENST00000623535 ANK2Q01484 3957 aa2.17□□□□□ -2.06
CDKL5-205ENST00000623535 DNAH3Q8TD57 4116 aa2.16□□□□□ -2.06
CDKL5-205ENST00000623535 LRP1Q07954 4544 aaKnown RBP2.15□□□□□ -2.06
CDKL5-205ENST00000623535 MT3P25713 68 aa2.15□□□□□ -2.06
CDKL5-205ENST00000623535 KRTAP19-8Q3LI54 63 aa2.15□□□□□ -2.07
CDKL5-205ENST00000623535 PKHD1L1Q86WI1 4243 aa2.15□□□□□ -2.07
CDKL5-205ENST00000623535 ANK3Q12955 4377 aaKnown RBP2.14□□□□□ -2.07
CDKL5-205ENST00000623535 KRTAP19-3Q7Z4W3 81 aa2.12□□□□□ -2.07
CDKL5-205ENST00000623535 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
CDKL5-205ENST00000623535 LCE1DQ5T752 114 aa2.11□□□□□ -2.07
CDKL5-205ENST00000623535 CMYA5Q8N3K9 4069 aa2.1□□□□□ -2.07
CDKL5-205ENST00000623535 DNAH17Q9UFH2 4485 aa2.1□□□□□ -2.07
CDKL5-205ENST00000623535 PLECQ15149 4684 aaKnown RBP2.1□□□□□ -2.07
CDKL5-205ENST00000623535 DNAH11Q96DT5 4516 aa2.09□□□□□ -2.08
CDKL5-205ENST00000623535 KRTAP9-7A8MTY7 169 aa2.09□□□□□ -2.08
CDKL5-205ENST00000623535 KRTAP2-3P0C7H8 128 aa2.09□□□□□ -2.08
CDKL5-205ENST00000623535 KRTAP2-4Q9BYR9 128 aa2.09□□□□□ -2.08
CDKL5-205ENST00000623535 RYR2Q92736 4967 aa2.08□□□□□ -2.08
CDKL5-205ENST00000623535 LCE5AQ5TCM9 118 aa2.08□□□□□ -2.08
CDKL5-205ENST00000623535 DNAH6Q9C0G6 4158 aa2.07□□□□□ -2.08
CDKL5-205ENST00000623535 FAT2Q9NYQ8 4349 aa2.07□□□□□ -2.08
CDKL5-205ENST00000623535 KMT2AQ03164 3969 aa2.06□□□□□ -2.08
CDKL5-205ENST00000623535 RYR1P21817 5038 aa2.06□□□□□ -2.08
CDKL5-205ENST00000623535 LYSTQ99698 3801 aa2.04□□□□□ -2.08
CDKL5-205ENST00000623535 PRKDCP78527 4128 aaKnown RBP2.03□□□□□ -2.08
CDKL5-205ENST00000623535 DNAH5Q8TE73 4624 aa2.03□□□□□ -2.09
CDKL5-205ENST00000623535 KRTAP19-6Q3LI70 58 aa2.02□□□□□ -2.09
CDKL5-205ENST00000623535 MT1LQ93083 61 aa2.02□□□□□ -2.09
CDKL5-205ENST00000623535 MT1XP80297 61 aa2.02□□□□□ -2.09
CDKL5-205ENST00000623535 KRTAP17-1Q9BYP8 105 aa2.01□□□□□ -2.09
CDKL5-205ENST00000623535 LCE1CQ5T751 118 aa2.01□□□□□ -2.09
CDKL5-205ENST00000623535 LCE1EQ5T753 118 aa2.01□□□□□ -2.09
CDKL5-205ENST00000623535 LCE1FQ5T754 118 aa2.01□□□□□ -2.09
CDKL5-205ENST00000623535 LCE1AQ5T7P2 110 aa2.01□□□□□ -2.09
CDKL5-205ENST00000623535 MT1BP07438 61 aa2□□□□□ -2.09
CDKL5-205ENST00000623535 MYCBP2O75592 4640 aa2□□□□□ -2.09
CDKL5-205ENST00000623535 DYNC1H1Q14204 4646 aaKnown RBP2□□□□□ -2.09
CDKL5-205ENST00000623535 LCE4AQ5TA78 99 aa1.99□□□□□ -2.09
CDKL5-205ENST00000623535 FAT3Q8TDW7 4589 aa1.97□□□□□ -2.09
CDKL5-205ENST00000623535 KRTAP2-2Q9BYT5 123 aa1.97□□□□□ -2.09
CDKL5-205ENST00000623535 KRTAP2-1Q9BYU5 128 aa1.97□□□□□ -2.09
CDKL5-205ENST00000623535 KRTAP6-3Q3LI67 103 aa1.96□□□□□ -2.09
CDKL5-205ENST00000623535 DNAH9Q9NYC9 4486 aa1.96□□□□□ -2.1
CDKL5-205ENST00000623535 KRTAP9-3Q9BYQ3 159 aa1.96□□□□□ -2.1
CDKL5-205ENST00000623535 KRTAP9-8Q9BYQ0 159 aa1.95□□□□□ -2.1
CDKL5-205ENST00000623535 KRTAP9-9Q9BYP9 154 aa1.95□□□□□ -2.1
CDKL5-205ENST00000623535 FLGP20930 4061 aaPredicted RBP1.95□□□□□ -2.1
CDKL5-205ENST00000623535 PKD1P98161 4303 aa1.95□□□□□ -2.1
CDKL5-205ENST00000623535 SACSQ9NZJ4 4579 aa1.95□□□□□ -2.1
CDKL5-205ENST00000623535 DYNC2H1Q8NCM8 4307 aaKnown RBP1.94□□□□□ -2.1
CDKL5-205ENST00000623535 DNAH8Q96JB1 4490 aa1.94□□□□□ -2.1
CDKL5-205ENST00000623535 CSMD3Q7Z407 3707 aa1.94□□□□□ -2.1
CDKL5-205ENST00000623535 APOBP04114 4563 aaKnown RBP1.93□□□□□ -2.1
CDKL5-205ENST00000623535 MT1MQ8N339 61 aa1.93□□□□□ -2.1
CDKL5-205ENST00000623535 KRTAP4-8A0A0G2JLE6 195 aa1.92□□□□□ -2.1
CDKL5-205ENST00000623535 KRTAP4-8Q9BYQ9 185 aa1.92□□□□□ -2.1
CDKL5-205ENST00000623535 DNHD1Q96M86 4753 aa1.91□□□□□ -2.1
CDKL5-205ENST00000623535 MT1EP04732 61 aa1.9□□□□□ -2.11
CDKL5-205ENST00000623535 PCLOQ9Y6V0 5065 aa1.9□□□□□ -2.11
CDKL5-205ENST00000623535 VPS13DQ5THJ4 4388 aa1.9□□□□□ -2.11
CDKL5-205ENST00000623535 PKHD1P08F94 4074 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 161.3 ms