RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 MUC2Q02817 5179 aa5.41□□□□□ -1.54
SNORD3D-201ENST00000619178 MT1HP80294 61 aa5.41□□□□□ -1.54
SNORD3D-201ENST00000619178 LCA10Q71F78 164 aa5.39□□□□□ -1.55
SNORD3D-201ENST00000619178 COA5Q86WW8 74 aa5.36□□□□□ -1.55
SNORD3D-201ENST00000619178 LCE2AQ5TA79 106 aaPredicted RBP5.34□□□□□ -1.55
SNORD3D-201ENST00000619178 KRTAP3-3Q9BYR6 98 aa5.29□□□□□ -1.56
SNORD3D-201ENST00000619178 SERP1Q9Y6X1 66 aa5.29□□□□□ -1.56
SNORD3D-201ENST00000619178 FLGP20930 4061 aaPredicted RBP5.26□□□□□ -1.57
SNORD3D-201ENST00000619178 H0YAA0 97 aa5.26□□□□□ -1.57
SNORD3D-201ENST00000619178 KRTAP10-6P60371 365 aaPredicted RBP5.26□□□□□ -1.57
SNORD3D-201ENST00000619178 FAT4Q6V0I7 4981 aa5.25□□□□□ -1.57
SNORD3D-201ENST00000619178 SEC61GP60059 68 aa5.25□□□□□ -1.57
SNORD3D-201ENST00000619178 LORP23490 312 aaPredicted RBP5.22□□□□□ -1.57
SNORD3D-201ENST00000619178 RPS28P62857 69 aaKnown RBP5.18□□□□□ -1.58
SNORD3D-201ENST00000619178 KRTAP10-10P60014 251 aa5.17□□□□□ -1.58
SNORD3D-201ENST00000619178 ADM2Q7Z4H4 148 aa5.17□□□□□ -1.58
SNORD3D-201ENST00000619178 PRR15LQ9BU68 103 aa5.17□□□□□ -1.58
SNORD3D-201ENST00000619178 CRIPTQ9P021 101 aa5.17□□□□□ -1.58
SNORD3D-201ENST00000619178 V9GYY9 64 aa5.17□□□□□ -1.58
SNORD3D-201ENST00000619178 KRTAP9-8Q9BYQ0 159 aa5.15□□□□□ -1.59
SNORD3D-201ENST00000619178 A0A1B0GU69 56 aa5.14□□□□□ -1.59
SNORD3D-201ENST00000619178 MT2AP02795 61 aa5.14□□□□□ -1.59
SNORD3D-201ENST00000619178 SMIM26A0A096LP01 95 aa5.13□□□□□ -1.59
SNORD3D-201ENST00000619178 LINC01558Q9Y6Z2 57 aa5.1□□□□□ -1.59
SNORD3D-201ENST00000619178 LCE2DQ5TA82 110 aaPredicted RBP5.09□□□□□ -1.59
SNORD3D-201ENST00000619178 MT1FP04733 61 aa5.08□□□□□ -1.6
SNORD3D-201ENST00000619178 R4GN34 69 aa5.08□□□□□ -1.6
SNORD3D-201ENST00000619178 Q1T7F1 81 aa5.06□□□□□ -1.6
SNORD3D-201ENST00000619178 M0QZ58 72 aa5.05□□□□□ -1.6
SNORD3D-201ENST00000619178 P0C880 135 aa5.05□□□□□ -1.6
SNORD3D-201ENST00000619178 KRTAP3-2Q9BYR7 98 aa5.04□□□□□ -1.6
SNORD3D-201ENST00000619178 A0A1B0GU33 70 aa5.02□□□□□ -1.61
SNORD3D-201ENST00000619178 SPRR2GQ9BYE4 73 aa4.99□□□□□ -1.61
SNORD3D-201ENST00000619178 Q5VV11 94 aa4.98□□□□□ -1.61
SNORD3D-201ENST00000619178 KRTAP9-3Q9BYQ3 159 aa4.98□□□□□ -1.61
SNORD3D-201ENST00000619178 UQCR11O14957 56 aa4.96□□□□□ -1.62
SNORD3D-201ENST00000619178 PSPHP1O15172 72 aa4.94□□□□□ -1.62
SNORD3D-201ENST00000619178 LINC01554Q52M75 96 aa4.91□□□□□ -1.62
SNORD3D-201ENST00000619178 KRTAP19-1Q8IUB9 90 aa4.91□□□□□ -1.62
SNORD3D-201ENST00000619178 A6NN06 94 aa4.88□□□□□ -1.63
SNORD3D-201ENST00000619178 PLAC4Q8WY50 150 aa4.88□□□□□ -1.63
SNORD3D-201ENST00000619178 KRTAP19-8Q3LI54 63 aa4.87□□□□□ -1.63
SNORD3D-201ENST00000619178 KRTAP9-2Q9BYQ4 174 aa4.87□□□□□ -1.63
SNORD3D-201ENST00000619178 A6NED7 52 aa4.86□□□□□ -1.63
SNORD3D-201ENST00000619178 SPATA8Q6RVD6 105 aa4.86□□□□□ -1.63
SNORD3D-201ENST00000619178 MIR22HGQ0VDD5 57 aa4.85□□□□□ -1.63
SNORD3D-201ENST00000619178 LCE2BO14633 110 aa4.84□□□□□ -1.63
SNORD3D-201ENST00000619178 KRTAP13-4Q3LI77 160 aa4.84□□□□□ -1.63
SNORD3D-201ENST00000619178 A0A0D9SG42 100 aa4.81□□□□□ -1.64
SNORD3D-201ENST00000619178 K7ERS5 55 aa4.8□□□□□ -1.64
SNORD3D-201ENST00000619178 MT1BP07438 61 aa4.76□□□□□ -1.65
SNORD3D-201ENST00000619178 SPINT4Q6UDR6 99 aa4.76□□□□□ -1.65
SNORD3D-201ENST00000619178 CAMK2N1Q7Z7J9 78 aa4.75□□□□□ -1.65
SNORD3D-201ENST00000619178 PRO2289Q9P1D8 64 aa4.75□□□□□ -1.65
SNORD3D-201ENST00000619178 A8MU10 97 aa4.74□□□□□ -1.65
SNORD3D-201ENST00000619178 CDC42SE1Q9NRR8 79 aa4.73□□□□□ -1.65
SNORD3D-201ENST00000619178 KRTAP12-1P59990 96 aa4.71□□□□□ -1.66
SNORD3D-201ENST00000619178 CRCT1Q9UGL9 99 aa4.69□□□□□ -1.66
SNORD3D-201ENST00000619178 KRTAP19-6Q3LI70 58 aa4.68□□□□□ -1.66
SNORD3D-201ENST00000619178 KRTAP12-2P59991 146 aa4.66□□□□□ -1.66
SNORD3D-201ENST00000619178 KRTAP10-5P60370 271 aa4.63□□□□□ -1.67
SNORD3D-201ENST00000619178 BRK1Q8WUW1 75 aa4.63□□□□□ -1.67
SNORD3D-201ENST00000619178 KRTAP9-6A0A140TA67 174 aa4.59□□□□□ -1.67
SNORD3D-201ENST00000619178 USH2AO75445 5202 aa4.58□□□□□ -1.68
SNORD3D-201ENST00000619178 MT1XP80297 61 aa4.57□□□□□ -1.68
SNORD3D-201ENST00000619178 FSIP2Q5CZC0 6907 aa4.52□□□□□ -1.69
SNORD3D-201ENST00000619178 SSPOA2VEC9 5147 aa4.51□□□□□ -1.69
SNORD3D-201ENST00000619178 TNP1P09430 55 aa4.48□□□□□ -1.69
SNORD3D-201ENST00000619178 ROMO1P60602 79 aa4.44□□□□□ -1.7
SNORD3D-201ENST00000619178 C10orf95Q9H7T3 257 aa4.44□□□□□ -1.7
SNORD3D-201ENST00000619178 KRTAP25-1Q3LHN0 102 aa4.43□□□□□ -1.7
SNORD3D-201ENST00000619178 PRO0628Q9UI54 55 aa4.43□□□□□ -1.7
SNORD3D-201ENST00000619178 PMAIP1Q13794 54 aa4.4□□□□□ -1.71
SNORD3D-201ENST00000619178 KRTAP10-12P60413 245 aa4.38□□□□□ -1.71
SNORD3D-201ENST00000619178 FCGBPQ9Y6R7 5405 aaPredicted RBP4.35□□□□□ -1.71
SNORD3D-201ENST00000619178 KRTAP10-7P60409 375 aaPredicted RBP4.35□□□□□ -1.71
SNORD3D-201ENST00000619178 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.32□□□□□ -1.72
SNORD3D-201ENST00000619178 KRTAP23-1A1A580 65 aa4.3□□□□□ -1.72
SNORD3D-201ENST00000619178 KRTAP8-1Q8IUC2 63 aa4.29□□□□□ -1.72
SNORD3D-201ENST00000619178 PP632Q6XCG6 107 aa4.28□□□□□ -1.72
SNORD3D-201ENST00000619178 KRTAP4-8A0A0G2JLE6 195 aa4.21□□□□□ -1.74
SNORD3D-201ENST00000619178 KRTAP6-3Q3LI67 103 aa4.21□□□□□ -1.74
SNORD3D-201ENST00000619178 LCE3AQ5TA76 89 aa4.21□□□□□ -1.74
SNORD3D-201ENST00000619178 KRTAP4-8Q9BYQ9 185 aa4.21□□□□□ -1.74
SNORD3D-201ENST00000619178 KRTAP9-7A8MTY7 169 aa4.18□□□□□ -1.74
SNORD3D-201ENST00000619178 KRTAP5-9P26371 169 aa4.16□□□□□ -1.74
SNORD3D-201ENST00000619178 MACF1Q9UPN3 7388 aaKnown RBP4.15□□□□□ -1.74
SNORD3D-201ENST00000619178 SPRR2FQ96RM1 72 aa4.15□□□□□ -1.75
SNORD3D-201ENST00000619178 KTN1-AS1Q86SY8 53 aa4.14□□□□□ -1.75
SNORD3D-201ENST00000619178 KRTAP12-3P60328 96 aa4.1□□□□□ -1.75
SNORD3D-201ENST00000619178 KRTAP19-5Q3LI72 72 aa4.09□□□□□ -1.75
SNORD3D-201ENST00000619178 KRTAP19-7Q3SYF9 63 aa4.06□□□□□ -1.76
SNORD3D-201ENST00000619178 KMT2DO14686 5537 aa4.04□□□□□ -1.76
SNORD3D-201ENST00000619178 MT1EP04732 61 aa4.03□□□□□ -1.76
SNORD3D-201ENST00000619178 KRTAP19-4Q3LI73 84 aa4.03□□□□□ -1.76
SNORD3D-201ENST00000619178 PRAC1Q96KF2 57 aa4.01□□□□□ -1.77
SNORD3D-201ENST00000619178 SPRR2EP22531 72 aa4□□□□□ -1.77
SNORD3D-201ENST00000619178 SPRR2BP35325 72 aa4□□□□□ -1.77
SNORD3D-201ENST00000619178 SPRR2AP35326 72 aa4□□□□□ -1.77
SNORD3D-201ENST00000619178 SYNE2Q8WXH0 6885 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms