RNA–Protein interactions for RNA: ENST00000619151.4

BRF1-221, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5 BASIC

Gene BRF1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-221ENST00000619151 Q1T7F1 81 aa14.02□□□□□ -0.16
BRF1-221ENST00000619151 H1FX-AS1Q4G0G2 97 aa14.01□□□□□ -0.17
BRF1-221ENST00000619151 S4R3F8 94 aa13.93□□□□□ -0.18
BRF1-221ENST00000619151 LINC01558Q9Y6Z2 57 aa13.9□□□□□ -0.19
BRF1-221ENST00000619151 LCA10Q71F78 164 aa13.84□□□□□ -0.19
BRF1-221ENST00000619151 PRR15LQ9BU68 103 aa13.77□□□□□ -0.21
BRF1-221ENST00000619151 PSPHP1O15172 72 aa13.74□□□□□ -0.21
BRF1-221ENST00000619151 KRTAP19-2Q3LHN2 52 aa13.73□□□□□ -0.21
BRF1-221ENST00000619151 KRTAP3-3Q9BYR6 98 aa13.73□□□□□ -0.21
BRF1-221ENST00000619151 A0A1B0GU69 56 aa13.69□□□□□ -0.22
BRF1-221ENST00000619151 SEC61GP60059 68 aa13.67□□□□□ -0.22
BRF1-221ENST00000619151 LCE2CQ5TA81 110 aa13.62□□□□□ -0.23
BRF1-221ENST00000619151 CSAG1Q6PB30 78 aa13.62□□□□□ -0.23
BRF1-221ENST00000619151 Q5VV11 94 aa13.61□□□□□ -0.23
BRF1-221ENST00000619151 FAT4Q6V0I7 4981 aa13.59□□□□□ -0.23
BRF1-221ENST00000619151 FLGP20930 4061 aaPredicted RBP13.46□□□□□ -0.25
BRF1-221ENST00000619151 A6NED7 52 aa13.38□□□□□ -0.27
BRF1-221ENST00000619151 LCE2AQ5TA79 106 aaPredicted RBP13.38□□□□□ -0.27
BRF1-221ENST00000619151 MT1HP80294 61 aa13.37□□□□□ -0.27
BRF1-221ENST00000619151 H0YAA0 97 aa13.33□□□□□ -0.28
BRF1-221ENST00000619151 UQCR11O14957 56 aa13.29□□□□□ -0.28
BRF1-221ENST00000619151 ADM2Q7Z4H4 148 aa13.29□□□□□ -0.28
BRF1-221ENST00000619151 A0A1B0GU33 70 aa13.26□□□□□ -0.29
BRF1-221ENST00000619151 KRTAP3-2Q9BYR7 98 aa13.26□□□□□ -0.29
BRF1-221ENST00000619151 KRTAP10-6P60371 365 aaPredicted RBP13.25□□□□□ -0.29
BRF1-221ENST00000619151 BRK1Q8WUW1 75 aa13.23□□□□□ -0.29
BRF1-221ENST00000619151 P0C880 135 aa13.15□□□□□ -0.3
BRF1-221ENST00000619151 M0R2T5 61 aa13.14□□□□□ -0.31
BRF1-221ENST00000619151 CDC42SE1Q9NRR8 79 aa13.14□□□□□ -0.31
BRF1-221ENST00000619151 MIR22HGQ0VDD5 57 aa13.13□□□□□ -0.31
BRF1-221ENST00000619151 SPATA8Q6RVD6 105 aa13.08□□□□□ -0.31
BRF1-221ENST00000619151 LORP23490 312 aaPredicted RBP12.96□□□□□ -0.33
BRF1-221ENST00000619151 PRO0628Q9UI54 55 aa12.95□□□□□ -0.34
BRF1-221ENST00000619151 M0QZ58 72 aa12.93□□□□□ -0.34
BRF1-221ENST00000619151 A8MU10 97 aa12.92□□□□□ -0.34
BRF1-221ENST00000619151 KRTAP13-4Q3LI77 160 aa12.87□□□□□ -0.35
BRF1-221ENST00000619151 R4GN34 69 aa12.84□□□□□ -0.35
BRF1-221ENST00000619151 KRTAP9-8Q9BYQ0 159 aa12.8□□□□□ -0.36
BRF1-221ENST00000619151 CRIPTQ9P021 101 aa12.78□□□□□ -0.36
BRF1-221ENST00000619151 A0A0D9SG42 100 aa12.7□□□□□ -0.38
BRF1-221ENST00000619151 MT2AP02795 61 aa12.68□□□□□ -0.38
BRF1-221ENST00000619151 K7ERS5 55 aa12.63□□□□□ -0.39
BRF1-221ENST00000619151 MT1FP04733 61 aa12.58□□□□□ -0.4
BRF1-221ENST00000619151 LINC01554Q52M75 96 aa12.57□□□□□ -0.4
BRF1-221ENST00000619151 KRTAP10-10P60014 251 aa12.56□□□□□ -0.4
BRF1-221ENST00000619151 PMAIP1Q13794 54 aa12.51□□□□□ -0.41
BRF1-221ENST00000619151 KRTAP12-1P59990 96 aa12.43□□□□□ -0.42
BRF1-221ENST00000619151 SPINT4Q6UDR6 99 aa12.43□□□□□ -0.42
BRF1-221ENST00000619151 LCE2DQ5TA82 110 aaPredicted RBP12.42□□□□□ -0.42
BRF1-221ENST00000619151 SPRR2GQ9BYE4 73 aa12.41□□□□□ -0.42
BRF1-221ENST00000619151 A6NN06 94 aa12.4□□□□□ -0.42
BRF1-221ENST00000619151 KRTAP12-2P59991 146 aa12.38□□□□□ -0.43
BRF1-221ENST00000619151 KRTAP9-3Q9BYQ3 159 aa12.38□□□□□ -0.43
BRF1-221ENST00000619151 KRTAP19-1Q8IUB9 90 aa12.32□□□□□ -0.44
BRF1-221ENST00000619151 KRTAP9-2Q9BYQ4 174 aa12.24□□□□□ -0.45
BRF1-221ENST00000619151 LCE2BO14633 110 aa12.12□□□□□ -0.47
BRF1-221ENST00000619151 PLAC4Q8WY50 150 aa12.09□□□□□ -0.47
BRF1-221ENST00000619151 KRTAP19-8Q3LI54 63 aa12.08□□□□□ -0.48
BRF1-221ENST00000619151 CAMK2N1Q7Z7J9 78 aa12.05□□□□□ -0.48
BRF1-221ENST00000619151 ROMO1P60602 79 aa12.02□□□□□ -0.48
BRF1-221ENST00000619151 KTN1-AS1Q86SY8 53 aa12.01□□□□□ -0.49
BRF1-221ENST00000619151 USH2AO75445 5202 aa11.95□□□□□ -0.5
BRF1-221ENST00000619151 MT1BP07438 61 aa11.86□□□□□ -0.51
BRF1-221ENST00000619151 SVIPQ8NHG7 77 aa11.83□□□□□ -0.52
BRF1-221ENST00000619151 FSIP2Q5CZC0 6907 aa11.81□□□□□ -0.52
BRF1-221ENST00000619151 C10orf95Q9H7T3 257 aa11.74□□□□□ -0.53
BRF1-221ENST00000619151 CRCT1Q9UGL9 99 aa11.71□□□□□ -0.53
BRF1-221ENST00000619151 SSPOA2VEC9 5147 aa11.65□□□□□ -0.54
BRF1-221ENST00000619151 PRAC1Q96KF2 57 aa11.65□□□□□ -0.55
BRF1-221ENST00000619151 KRTAP19-6Q3LI70 58 aa11.57□□□□□ -0.56
BRF1-221ENST00000619151 KRTAP9-6A0A140TA67 174 aa11.55□□□□□ -0.56
BRF1-221ENST00000619151 KRTAP25-1Q3LHN0 102 aa11.54□□□□□ -0.56
BRF1-221ENST00000619151 PRO2289Q9P1D8 64 aa11.51□□□□□ -0.57
BRF1-221ENST00000619151 MT1XP80297 61 aa11.5□□□□□ -0.57
BRF1-221ENST00000619151 TNP1P09430 55 aa11.48□□□□□ -0.57
BRF1-221ENST00000619151 KRTAP10-5P60370 271 aa11.47□□□□□ -0.57
BRF1-221ENST00000619151 FCGBPQ9Y6R7 5405 aaPredicted RBP11.31□□□□□ -0.6
BRF1-221ENST00000619151 PP632Q6XCG6 107 aa11.19□□□□□ -0.62
BRF1-221ENST00000619151 KRTAP23-1A1A580 65 aa11.15□□□□□ -0.62
BRF1-221ENST00000619151 KRTAP10-7P60409 375 aaPredicted RBP11.02□□□□□ -0.65
BRF1-221ENST00000619151 KRTAP10-12P60413 245 aa10.99□□□□□ -0.65
BRF1-221ENST00000619151 LCE3AQ5TA76 89 aa10.9□□□□□ -0.66
BRF1-221ENST00000619151 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.86□□□□□ -0.67
BRF1-221ENST00000619151 MACF1Q9UPN3 7388 aaKnown RBP10.8□□□□□ -0.68
BRF1-221ENST00000619151 KRTAP8-1Q8IUC2 63 aa10.71□□□□□ -0.69
BRF1-221ENST00000619151 SYNE2Q8WXH0 6885 aaKnown RBP10.55□□□□□ -0.72
BRF1-221ENST00000619151 KRTAP4-8A0A0G2JLE6 195 aa10.54□□□□□ -0.72
BRF1-221ENST00000619151 KRTAP4-8Q9BYQ9 185 aa10.54□□□□□ -0.72
BRF1-221ENST00000619151 KRTAP12-3P60328 96 aa10.5□□□□□ -0.73
BRF1-221ENST00000619151 KMT2DO14686 5537 aa10.48□□□□□ -0.73
BRF1-221ENST00000619151 KRTAP9-7A8MTY7 169 aa10.48□□□□□ -0.73
BRF1-221ENST00000619151 KRTAP6-3Q3LI67 103 aa10.45□□□□□ -0.74
BRF1-221ENST00000619151 KRTAP19-5Q3LI72 72 aa10.4□□□□□ -0.74
BRF1-221ENST00000619151 KRTAP5-9P26371 169 aa10.33□□□□□ -0.76
BRF1-221ENST00000619151 KRTAP15-1Q3LI76 137 aa10.31□□□□□ -0.76
BRF1-221ENST00000619151 KRTAP19-7Q3SYF9 63 aa10.24□□□□□ -0.77
BRF1-221ENST00000619151 SPRR2FQ96RM1 72 aa10.16□□□□□ -0.78
BRF1-221ENST00000619151 MT1EP04732 61 aa10.1□□□□□ -0.79
BRF1-221ENST00000619151 MUC12Q9UKN1 5478 aa9.99□□□□□ -0.81
BRF1-221ENST00000619151 KRTAP19-4Q3LI73 84 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms