RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 FAT1Q14517 4588 aa6.36□□□□□ -1.39
MATR3-227ENST00000618441 PKHD1P08F94 4074 aa6.35□□□□□ -1.39
MATR3-227ENST00000618441 LRP1BQ9NZR2 4599 aa6.34□□□□□ -1.39
MATR3-227ENST00000618441 KRTAP10-6P60371 365 aaPredicted RBP6.32□□□□□ -1.4
MATR3-227ENST00000618441 PLAC4Q8WY50 150 aa6.32□□□□□ -1.4
MATR3-227ENST00000618441 Q5VSD8 79 aa6.3□□□□□ -1.4
MATR3-227ENST00000618441 DYNC2H1Q8NCM8 4307 aaKnown RBP6.29□□□□□ -1.4
MATR3-227ENST00000618441 DNAH5Q8TE73 4624 aa6.28□□□□□ -1.4
MATR3-227ENST00000618441 KRTAP1-4P0C5Y4 121 aa6.28□□□□□ -1.4
MATR3-227ENST00000618441 HECTD4Q9Y4D8 3996 aa6.26□□□□□ -1.41
MATR3-227ENST00000618441 KRTAP10-8P60410 259 aa6.25□□□□□ -1.41
MATR3-227ENST00000618441 SACSQ9NZJ4 4579 aa6.24□□□□□ -1.41
MATR3-227ENST00000618441 KRTAP12-1P59990 96 aa6.2□□□□□ -1.42
MATR3-227ENST00000618441 PRO2289Q9P1D8 64 aa6.19□□□□□ -1.42
MATR3-227ENST00000618441 KIAA1109Q2LD37 5005 aa6.19□□□□□ -1.42
MATR3-227ENST00000618441 DYNC1H1Q14204 4646 aaKnown RBP6.18□□□□□ -1.42
MATR3-227ENST00000618441 KRTAP3-2Q9BYR7 98 aa6.18□□□□□ -1.42
MATR3-227ENST00000618441 VPS13BQ7Z7G8 4022 aa6.17□□□□□ -1.42
MATR3-227ENST00000618441 FAT2Q9NYQ8 4349 aa6.16□□□□□ -1.42
MATR3-227ENST00000618441 XP32Q5T750 250 aa6.14□□□□□ -1.43
MATR3-227ENST00000618441 KRTAP3-3Q9BYR6 98 aa6.12□□□□□ -1.43
MATR3-227ENST00000618441 A0A1B0GVY2 172 aa6.1□□□□□ -1.43
MATR3-227ENST00000618441 LRP1Q07954 4544 aaKnown RBP6.1□□□□□ -1.43
MATR3-227ENST00000618441 RYR3Q15413 4870 aa6.1□□□□□ -1.43
MATR3-227ENST00000618441 MYCBP2O75592 4640 aa6.1□□□□□ -1.43
MATR3-227ENST00000618441 M0QZ58 72 aa6.09□□□□□ -1.43
MATR3-227ENST00000618441 APOBP04114 4563 aaKnown RBP6.07□□□□□ -1.44
MATR3-227ENST00000618441 RYR2Q92736 4967 aa6.07□□□□□ -1.44
MATR3-227ENST00000618441 FAT3Q8TDW7 4589 aa6.05□□□□□ -1.44
MATR3-227ENST00000618441 PKD1P98161 4303 aa6.04□□□□□ -1.44
MATR3-227ENST00000618441 RYR1P21817 5038 aa6□□□□□ -1.45
MATR3-227ENST00000618441 EPPK1P58107 5090 aaKnown RBP5.98□□□□□ -1.45
MATR3-227ENST00000618441 KRTAP17-1Q9BYP8 105 aa5.96□□□□□ -1.46
MATR3-227ENST00000618441 KRTAP4-5Q9BYR2 181 aa5.94□□□□□ -1.46
MATR3-227ENST00000618441 KRTAP10-4P60372 401 aaPredicted RBP5.9□□□□□ -1.47
MATR3-227ENST00000618441 RPS29P62273 56 aaKnown RBP5.89□□□□□ -1.47
MATR3-227ENST00000618441 M0R2T5 61 aa5.82□□□□□ -1.48
MATR3-227ENST00000618441 HSPG2P98160 4391 aa5.81□□□□□ -1.48
MATR3-227ENST00000618441 LRP2P98164 4655 aa5.72□□□□□ -1.49
MATR3-227ENST00000618441 MT1HL1P0DM35 61 aa5.7□□□□□ -1.5
MATR3-227ENST00000618441 PP632Q6XCG6 107 aa5.7□□□□□ -1.5
MATR3-227ENST00000618441 ABCA13Q86UQ4 5058 aa5.7□□□□□ -1.5
MATR3-227ENST00000618441 HERC2O95714 4834 aa5.69□□□□□ -1.5
MATR3-227ENST00000618441 LPAP08519 4548 aa5.68□□□□□ -1.5
MATR3-227ENST00000618441 INE1O15225 51 aa5.68□□□□□ -1.5
MATR3-227ENST00000618441 PKHD1L1Q86WI1 4243 aa5.67□□□□□ -1.5
MATR3-227ENST00000618441 LORP23490 312 aaPredicted RBP5.64□□□□□ -1.51
MATR3-227ENST00000618441 LCE2CQ5TA81 110 aa5.62□□□□□ -1.51
MATR3-227ENST00000618441 MUC2Q02817 5179 aa5.61□□□□□ -1.51
MATR3-227ENST00000618441 HERC1Q15751 4861 aa5.56□□□□□ -1.52
MATR3-227ENST00000618441 TNP1P09430 55 aa5.55□□□□□ -1.52
MATR3-227ENST00000618441 TNXBP22105 4242 aa5.52□□□□□ -1.53
MATR3-227ENST00000618441 PCLOQ9Y6V0 5065 aa5.49□□□□□ -1.53
MATR3-227ENST00000618441 RNF213Q63HN8 5207 aa5.47□□□□□ -1.53
MATR3-227ENST00000618441 LCE2AQ5TA79 106 aaPredicted RBP5.44□□□□□ -1.54
MATR3-227ENST00000618441 BIRC6Q9NR09 4857 aa5.42□□□□□ -1.54
MATR3-227ENST00000618441 LCE2DQ5TA82 110 aaPredicted RBP5.4□□□□□ -1.55
MATR3-227ENST00000618441 FAT4Q6V0I7 4981 aa5.35□□□□□ -1.55
MATR3-227ENST00000618441 UBR4Q5T4S7 5183 aa5.34□□□□□ -1.56
MATR3-227ENST00000618441 KRTAP4-1Q9BYQ7 146 aa5.33□□□□□ -1.56
MATR3-227ENST00000618441 LCE2BO14633 110 aa5.32□□□□□ -1.56
MATR3-227ENST00000618441 SPRR5A0A1B0GTR4 108 aa5.25□□□□□ -1.57
MATR3-227ENST00000618441 KRTAP10-10P60014 251 aa5.19□□□□□ -1.58
MATR3-227ENST00000618441 LCE3AQ5TA76 89 aa5.13□□□□□ -1.59
MATR3-227ENST00000618441 HMCN2Q8NDA2 5059 aa5.1□□□□□ -1.59
MATR3-227ENST00000618441 FSIP2Q5CZC0 6907 aa5.03□□□□□ -1.6
MATR3-227ENST00000618441 MUC17Q685J3 4493 aa4.96□□□□□ -1.62
MATR3-227ENST00000618441 KRTAP19-2Q3LHN2 52 aa4.86□□□□□ -1.63
MATR3-227ENST00000618441 KRTAP12-3P60328 96 aa4.84□□□□□ -1.64
MATR3-227ENST00000618441 MT1HP80294 61 aa4.82□□□□□ -1.64
MATR3-227ENST00000618441 USH2AO75445 5202 aa4.82□□□□□ -1.64
MATR3-227ENST00000618441 FLGP20930 4061 aaPredicted RBP4.78□□□□□ -1.64
MATR3-227ENST00000618441 MT1FP04733 61 aa4.72□□□□□ -1.65
MATR3-227ENST00000618441 KRTAP8-1Q8IUC2 63 aa4.7□□□□□ -1.66
MATR3-227ENST00000618441 MT2AP02795 61 aa4.69□□□□□ -1.66
MATR3-227ENST00000618441 KRTAP10-12P60413 245 aa4.69□□□□□ -1.66
MATR3-227ENST00000618441 KRTAP19-1Q8IUB9 90 aa4.6□□□□□ -1.67
MATR3-227ENST00000618441 KRTAP9-8Q9BYQ0 159 aa4.59□□□□□ -1.67
MATR3-227ENST00000618441 SPRR2GQ9BYE4 73 aa4.53□□□□□ -1.68
MATR3-227ENST00000618441 KMT2DO14686 5537 aa4.52□□□□□ -1.69
MATR3-227ENST00000618441 KRTAP10-7P60409 375 aaPredicted RBP4.49□□□□□ -1.69
MATR3-227ENST00000618441 LCE3CQ5T5A8 94 aa4.46□□□□□ -1.69
MATR3-227ENST00000618441 KRTAP19-5Q3LI72 72 aa4.43□□□□□ -1.7
MATR3-227ENST00000618441 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
MATR3-227ENST00000618441 KRTAP10-5P60370 271 aa4.4□□□□□ -1.71
MATR3-227ENST00000618441 MT1BP07438 61 aa4.39□□□□□ -1.71
MATR3-227ENST00000618441 MT1XP80297 61 aa4.39□□□□□ -1.71
MATR3-227ENST00000618441 KRTAP9-3Q9BYQ3 159 aa4.39□□□□□ -1.71
MATR3-227ENST00000618441 KRTAP4-7Q9BYR0 210 aa4.37□□□□□ -1.71
MATR3-227ENST00000618441 KRTAP9-6A8MVA2 160 aa4.36□□□□□ -1.71
MATR3-227ENST00000618441 LCE1AQ5T7P2 110 aa4.33□□□□□ -1.72
MATR3-227ENST00000618441 CRCT1Q9UGL9 99 aa4.31□□□□□ -1.72
MATR3-227ENST00000618441 LCE1FQ5T754 118 aa4.3□□□□□ -1.72
MATR3-227ENST00000618441 KRTAP12-4P60329 112 aa4.28□□□□□ -1.72
MATR3-227ENST00000618441 KRTAP19-8Q3LI54 63 aa4.26□□□□□ -1.73
MATR3-227ENST00000618441 KRTAP4-8A0A0G2JLE6 195 aa4.26□□□□□ -1.73
MATR3-227ENST00000618441 KRTAP4-8Q9BYQ9 185 aa4.26□□□□□ -1.73
MATR3-227ENST00000618441 KRTAP2-2Q9BYT5 123 aa4.26□□□□□ -1.73
MATR3-227ENST00000618441 DSTQ03001 7570 aaKnown RBP4.26□□□□□ -1.73
MATR3-227ENST00000618441 LCE5AQ5TCM9 118 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms