RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 FLG2Q5D862 2391 aaPredicted RBP7.94□□□□□ -1.14
GPN1-212ENST00000616939 A0A1B0GVY2 172 aa7.94□□□□□ -1.14
GPN1-212ENST00000616939 A0A0D9SG42 100 aa7.89□□□□□ -1.15
GPN1-212ENST00000616939 TNXBP22105 4242 aa7.86□□□□□ -1.15
GPN1-212ENST00000616939 FAT3Q8TDW7 4589 aa7.85□□□□□ -1.15
GPN1-212ENST00000616939 SPINT4Q6UDR6 99 aa7.85□□□□□ -1.15
GPN1-212ENST00000616939 FAT1Q14517 4588 aa7.84□□□□□ -1.15
GPN1-212ENST00000616939 DNHD1Q96M86 4753 aa7.81□□□□□ -1.16
GPN1-212ENST00000616939 KRTAP10-8P60410 259 aa7.81□□□□□ -1.16
GPN1-212ENST00000616939 LRP1Q07954 4544 aaKnown RBP7.81□□□□□ -1.16
GPN1-212ENST00000616939 KRTAP15-1Q3LI76 137 aa7.8□□□□□ -1.16
GPN1-212ENST00000616939 XP32Q5T750 250 aa7.8□□□□□ -1.16
GPN1-212ENST00000616939 HSPG2P98160 4391 aa7.77□□□□□ -1.17
GPN1-212ENST00000616939 KRTAP12-2P59991 146 aa7.77□□□□□ -1.17
GPN1-212ENST00000616939 C10orf95Q9H7T3 257 aa7.76□□□□□ -1.17
GPN1-212ENST00000616939 KRTAP12-1P59990 96 aa7.75□□□□□ -1.17
GPN1-212ENST00000616939 DMBT1Q9UGM3 2413 aaPredicted RBP7.72□□□□□ -1.17
GPN1-212ENST00000616939 M0QZ58 72 aa7.7□□□□□ -1.18
GPN1-212ENST00000616939 NDUFAF8A1L188 74 aa7.59□□□□□ -1.19
GPN1-212ENST00000616939 KRTAP21-3Q3LHN1 58 aa7.57□□□□□ -1.2
GPN1-212ENST00000616939 Q5VSD8 79 aa7.54□□□□□ -1.2
GPN1-212ENST00000616939 RYR2Q92736 4967 aa7.5□□□□□ -1.21
GPN1-212ENST00000616939 MT1HL1P0DM35 61 aa7.43□□□□□ -1.22
GPN1-212ENST00000616939 MYCBP2O75592 4640 aa7.39□□□□□ -1.23
GPN1-212ENST00000616939 R4GN34 69 aa7.33□□□□□ -1.24
GPN1-212ENST00000616939 RYR1P21817 5038 aa7.31□□□□□ -1.24
GPN1-212ENST00000616939 PLAC4Q8WY50 150 aa7.27□□□□□ -1.25
GPN1-212ENST00000616939 KRTAP17-1Q9BYP8 105 aa7.25□□□□□ -1.25
GPN1-212ENST00000616939 KMT2CQ8NEZ4 4911 aaKnown RBP7.23□□□□□ -1.25
GPN1-212ENST00000616939 PP632Q6XCG6 107 aa7.22□□□□□ -1.25
GPN1-212ENST00000616939 LRP2P98164 4655 aa7.15□□□□□ -1.27
GPN1-212ENST00000616939 LPAP08519 4548 aa7.14□□□□□ -1.27
GPN1-212ENST00000616939 LORP23490 312 aaPredicted RBP7.13□□□□□ -1.27
GPN1-212ENST00000616939 SEC61BP60468 96 aaKnown RBP7.13□□□□□ -1.27
GPN1-212ENST00000616939 MUC17Q685J3 4493 aa7.04□□□□□ -1.28
GPN1-212ENST00000616939 LUZP6Q538Z0 58 aa7.01□□□□□ -1.29
GPN1-212ENST00000616939 RYR3Q15413 4870 aa6.99□□□□□ -1.29
GPN1-212ENST00000616939 KRTAP23-1A1A580 65 aa6.98□□□□□ -1.29
GPN1-212ENST00000616939 CAMK2N1Q7Z7J9 78 aa6.98□□□□□ -1.29
GPN1-212ENST00000616939 KRTAP19-2Q3LHN2 52 aa6.97□□□□□ -1.29
GPN1-212ENST00000616939 KRTAP4-1Q9BYQ7 146 aa6.95□□□□□ -1.3
GPN1-212ENST00000616939 KIAA1109Q2LD37 5005 aa6.94□□□□□ -1.3
GPN1-212ENST00000616939 A0A0A0MQY5 61 aa6.9□□□□□ -1.3
GPN1-212ENST00000616939 SPRR5A0A1B0GTR4 108 aa6.85□□□□□ -1.31
GPN1-212ENST00000616939 TNP1P09430 55 aa6.83□□□□□ -1.32
GPN1-212ENST00000616939 HERC1Q15751 4861 aa6.81□□□□□ -1.32
GPN1-212ENST00000616939 ABCA13Q86UQ4 5058 aa6.75□□□□□ -1.33
GPN1-212ENST00000616939 KRTAP4-5Q9BYR2 181 aa6.74□□□□□ -1.33
GPN1-212ENST00000616939 FLGP20930 4061 aaPredicted RBP6.73□□□□□ -1.33
GPN1-212ENST00000616939 J3QL48 77 aa6.63□□□□□ -1.35
GPN1-212ENST00000616939 EPPK1P58107 5090 aaKnown RBP6.58□□□□□ -1.36
GPN1-212ENST00000616939 SPRR2GQ9BYE4 73 aa6.54□□□□□ -1.36
GPN1-212ENST00000616939 BIRC6Q9NR09 4857 aa6.53□□□□□ -1.36
GPN1-212ENST00000616939 KRTAP19-1Q8IUB9 90 aa6.43□□□□□ -1.38
GPN1-212ENST00000616939 LCE3AQ5TA76 89 aa6.39□□□□□ -1.39
GPN1-212ENST00000616939 LCE2CQ5TA81 110 aa6.39□□□□□ -1.39
GPN1-212ENST00000616939 HERC2O95714 4834 aa6.34□□□□□ -1.39
GPN1-212ENST00000616939 KRTAP8-1Q8IUC2 63 aa6.34□□□□□ -1.4
GPN1-212ENST00000616939 PRO2289Q9P1D8 64 aa6.33□□□□□ -1.4
GPN1-212ENST00000616939 INE1O15225 51 aa6.29□□□□□ -1.4
GPN1-212ENST00000616939 KRTAP19-8Q3LI54 63 aa6.24□□□□□ -1.41
GPN1-212ENST00000616939 PCLOQ9Y6V0 5065 aa6.2□□□□□ -1.42
GPN1-212ENST00000616939 MT2AP02795 61 aa6.18□□□□□ -1.42
GPN1-212ENST00000616939 MT1HP80294 61 aa6.17□□□□□ -1.42
GPN1-212ENST00000616939 MT1FP04733 61 aa6.16□□□□□ -1.42
GPN1-212ENST00000616939 M0R2T5 61 aa6.13□□□□□ -1.43
GPN1-212ENST00000616939 KRTAP10-10P60014 251 aa6.12□□□□□ -1.43
GPN1-212ENST00000616939 MUC2Q02817 5179 aa6.11□□□□□ -1.43
GPN1-212ENST00000616939 KRTAP10-5P60370 271 aa6.1□□□□□ -1.43
GPN1-212ENST00000616939 HMCN2Q8NDA2 5059 aa6.09□□□□□ -1.43
GPN1-212ENST00000616939 KRTAP12-3P60328 96 aa6.09□□□□□ -1.43
GPN1-212ENST00000616939 MT1XP80297 61 aa6.09□□□□□ -1.44
GPN1-212ENST00000616939 KRTAP9-8Q9BYQ0 159 aa6.09□□□□□ -1.44
GPN1-212ENST00000616939 MT1BP07438 61 aa6.07□□□□□ -1.44
GPN1-212ENST00000616939 KRTAP10-12P60413 245 aa6.07□□□□□ -1.44
GPN1-212ENST00000616939 UBR4Q5T4S7 5183 aa5.89□□□□□ -1.47
GPN1-212ENST00000616939 KRTAP10-7P60409 375 aaPredicted RBP5.88□□□□□ -1.47
GPN1-212ENST00000616939 FAT4Q6V0I7 4981 aa5.88□□□□□ -1.47
GPN1-212ENST00000616939 RNF213Q63HN8 5207 aa5.84□□□□□ -1.47
GPN1-212ENST00000616939 KRTAP9-3Q9BYQ3 159 aa5.83□□□□□ -1.48
GPN1-212ENST00000616939 LCE3CQ5T5A8 94 aa5.77□□□□□ -1.49
GPN1-212ENST00000616939 LCE2DQ5TA82 110 aaPredicted RBP5.72□□□□□ -1.49
GPN1-212ENST00000616939 KRTAP19-5Q3LI72 72 aa5.71□□□□□ -1.49
GPN1-212ENST00000616939 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
GPN1-212ENST00000616939 KRTAP2-3P0C7H8 128 aa5.57□□□□□ -1.52
GPN1-212ENST00000616939 KRTAP2-4Q9BYR9 128 aa5.57□□□□□ -1.52
GPN1-212ENST00000616939 KRTAP2-1Q9BYU5 128 aa5.57□□□□□ -1.52
GPN1-212ENST00000616939 KRTAP9-6A8MVA2 160 aa5.53□□□□□ -1.52
GPN1-212ENST00000616939 LCE2BO14633 110 aa5.51□□□□□ -1.53
GPN1-212ENST00000616939 KRTAP19-7Q3SYF9 63 aa5.42□□□□□ -1.54
GPN1-212ENST00000616939 KRTAP4-8A0A0G2JLE6 195 aa5.38□□□□□ -1.55
GPN1-212ENST00000616939 KRTAP4-8Q9BYQ9 185 aa5.38□□□□□ -1.55
GPN1-212ENST00000616939 MT1LQ93083 61 aa5.31□□□□□ -1.56
GPN1-212ENST00000616939 MT1EP04732 61 aa5.27□□□□□ -1.57
GPN1-212ENST00000616939 KRTAP4-7Q9BYR0 210 aa5.27□□□□□ -1.57
GPN1-212ENST00000616939 LCE2AQ5TA79 106 aaPredicted RBP5.22□□□□□ -1.57
GPN1-212ENST00000616939 KMT2DO14686 5537 aa5.13□□□□□ -1.59
GPN1-212ENST00000616939 KRTAP9-6A0A140TA67 174 aa5.1□□□□□ -1.59
GPN1-212ENST00000616939 KRTAP9-2Q9BYQ4 174 aa5.09□□□□□ -1.59
GPN1-212ENST00000616939 USH2AO75445 5202 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 395.7 ms