RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, humanhuman

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-223ENST00000616010 LCA10Q71F78 164 aa11.54□□□□□ -0.56
CCND3-223ENST00000616010 FAT4Q6V0I7 4981 aa11.51□□□□□ -0.57
CCND3-223ENST00000616010 FLGP20930 4061 aaPredicted RBP11.5□□□□□ -0.57
CCND3-223ENST00000616010 KRTAP3-3Q9BYR6 98 aa11.45□□□□□ -0.58
CCND3-223ENST00000616010 RPS28P62857 69 aaKnown RBP11.4□□□□□ -0.58
CCND3-223ENST00000616010 SPTSSBQ8NFR3 76 aa11.37□□□□□ -0.59
CCND3-223ENST00000616010 MT1HP80294 61 aa11.35□□□□□ -0.59
CCND3-223ENST00000616010 CSAG1Q6PB30 78 aa11.32□□□□□ -0.6
CCND3-223ENST00000616010 M0R2T5 61 aa11.25□□□□□ -0.61
CCND3-223ENST00000616010 SMIM26A0A096LP01 95 aa11.23□□□□□ -0.61
CCND3-223ENST00000616010 LINC01558Q9Y6Z2 57 aa11.09□□□□□ -0.63
CCND3-223ENST00000616010 Q1T7F1 81 aa11.08□□□□□ -0.64
CCND3-223ENST00000616010 LCE2AQ5TA79 106 aaPredicted RBP11.06□□□□□ -0.64
CCND3-223ENST00000616010 V9GYY9 64 aa11.05□□□□□ -0.64
CCND3-223ENST00000616010 A0A1B0GU69 56 aa11.03□□□□□ -0.64
CCND3-223ENST00000616010 ADM2Q7Z4H4 148 aa11.03□□□□□ -0.64
CCND3-223ENST00000616010 H0YAA0 97 aa11.02□□□□□ -0.64
CCND3-223ENST00000616010 SEC61GP60059 68 aa11.02□□□□□ -0.64
CCND3-223ENST00000616010 PRR15LQ9BU68 103 aa10.99□□□□□ -0.65
CCND3-223ENST00000616010 KRTAP3-2Q9BYR7 98 aa10.97□□□□□ -0.65
CCND3-223ENST00000616010 KRTAP10-6P60371 365 aaPredicted RBP10.96□□□□□ -0.65
CCND3-223ENST00000616010 PSPHP1O15172 72 aa10.95□□□□□ -0.66
CCND3-223ENST00000616010 P0C880 135 aa10.94□□□□□ -0.66
CCND3-223ENST00000616010 LORP23490 312 aaPredicted RBP10.9□□□□□ -0.66
CCND3-223ENST00000616010 KRTAP9-8Q9BYQ0 159 aa10.88□□□□□ -0.67
CCND3-223ENST00000616010 MT2AP02795 61 aa10.84□□□□□ -0.67
CCND3-223ENST00000616010 Q5VV11 94 aa10.83□□□□□ -0.68
CCND3-223ENST00000616010 MT1FP04733 61 aa10.79□□□□□ -0.68
CCND3-223ENST00000616010 A0A1B0GU33 70 aa10.75□□□□□ -0.69
CCND3-223ENST00000616010 KRTAP10-10P60014 251 aa10.75□□□□□ -0.69
CCND3-223ENST00000616010 R4GN34 69 aa10.67□□□□□ -0.7
CCND3-223ENST00000616010 M0QZ58 72 aa10.64□□□□□ -0.71
CCND3-223ENST00000616010 KRTAP13-4Q3LI77 160 aa10.64□□□□□ -0.71
CCND3-223ENST00000616010 UQCR11O14957 56 aa10.63□□□□□ -0.71
CCND3-223ENST00000616010 CRIPTQ9P021 101 aa10.63□□□□□ -0.71
CCND3-223ENST00000616010 SPATA8Q6RVD6 105 aa10.62□□□□□ -0.71
CCND3-223ENST00000616010 A6NED7 52 aa10.61□□□□□ -0.71
CCND3-223ENST00000616010 MIR22HGQ0VDD5 57 aa10.51□□□□□ -0.73
CCND3-223ENST00000616010 KRTAP19-1Q8IUB9 90 aa10.49□□□□□ -0.73
CCND3-223ENST00000616010 KRTAP9-3Q9BYQ3 159 aa10.49□□□□□ -0.73
CCND3-223ENST00000616010 SPRR2GQ9BYE4 73 aa10.48□□□□□ -0.73
CCND3-223ENST00000616010 LINC01554Q52M75 96 aa10.48□□□□□ -0.73
CCND3-223ENST00000616010 SVIPQ8NHG7 77 aa10.46□□□□□ -0.73
CCND3-223ENST00000616010 A0A0D9SG42 100 aa10.44□□□□□ -0.74
CCND3-223ENST00000616010 A8MU10 97 aa10.44□□□□□ -0.74
CCND3-223ENST00000616010 CDC42SE1Q9NRR8 79 aa10.36□□□□□ -0.75
CCND3-223ENST00000616010 BRK1Q8WUW1 75 aa10.32□□□□□ -0.76
CCND3-223ENST00000616010 LCE2BO14633 110 aa10.26□□□□□ -0.77
CCND3-223ENST00000616010 KRTAP19-8Q3LI54 63 aa10.24□□□□□ -0.77
CCND3-223ENST00000616010 A6NN06 94 aa10.21□□□□□ -0.78
CCND3-223ENST00000616010 KRTAP12-1P59990 96 aa10.21□□□□□ -0.78
CCND3-223ENST00000616010 SPINT4Q6UDR6 99 aa10.2□□□□□ -0.78
CCND3-223ENST00000616010 KRTAP12-2P59991 146 aa10.19□□□□□ -0.78
CCND3-223ENST00000616010 MT1BP07438 61 aa10.14□□□□□ -0.79
CCND3-223ENST00000616010 LCE2DQ5TA82 110 aaPredicted RBP10.11□□□□□ -0.79
CCND3-223ENST00000616010 PLAC4Q8WY50 150 aa10.09□□□□□ -0.79
CCND3-223ENST00000616010 K7ERS5 55 aa10.07□□□□□ -0.8
CCND3-223ENST00000616010 USH2AO75445 5202 aa10.06□□□□□ -0.8
CCND3-223ENST00000616010 CAMK2N1Q7Z7J9 78 aa9.96□□□□□ -0.81
CCND3-223ENST00000616010 PRO0628Q9UI54 55 aa9.92□□□□□ -0.82
CCND3-223ENST00000616010 KRTAP9-2Q9BYQ4 174 aa9.89□□□□□ -0.83
CCND3-223ENST00000616010 FSIP2Q5CZC0 6907 aa9.84□□□□□ -0.83
CCND3-223ENST00000616010 SSPOA2VEC9 5147 aa9.78□□□□□ -0.84
CCND3-223ENST00000616010 MT1XP80297 61 aa9.77□□□□□ -0.85
CCND3-223ENST00000616010 KRTAP10-5P60370 271 aa9.74□□□□□ -0.85
CCND3-223ENST00000616010 PMAIP1Q13794 54 aa9.72□□□□□ -0.85
CCND3-223ENST00000616010 PRO2289Q9P1D8 64 aa9.68□□□□□ -0.86
CCND3-223ENST00000616010 KRTAP19-6Q3LI70 58 aa9.67□□□□□ -0.86
CCND3-223ENST00000616010 C10orf95Q9H7T3 257 aa9.66□□□□□ -0.86
CCND3-223ENST00000616010 ROMO1P60602 79 aa9.61□□□□□ -0.87
CCND3-223ENST00000616010 CRCT1Q9UGL9 99 aa9.49□□□□□ -0.89
CCND3-223ENST00000616010 TNP1P09430 55 aa9.41□□□□□ -0.9
CCND3-223ENST00000616010 FCGBPQ9Y6R7 5405 aaPredicted RBP9.4□□□□□ -0.9
CCND3-223ENST00000616010 KRTAP10-7P60409 375 aaPredicted RBP9.38□□□□□ -0.91
CCND3-223ENST00000616010 KRTAP25-1Q3LHN0 102 aa9.35□□□□□ -0.91
CCND3-223ENST00000616010 KRTAP10-12P60413 245 aa9.24□□□□□ -0.93
CCND3-223ENST00000616010 KTN1-AS1Q86SY8 53 aa9.24□□□□□ -0.93
CCND3-223ENST00000616010 KRTAP9-6A0A140TA67 174 aa9.19□□□□□ -0.94
CCND3-223ENST00000616010 PRAC1Q96KF2 57 aa9.17□□□□□ -0.94
CCND3-223ENST00000616010 KMT2DO14686 5537 aa9.14□□□□□ -0.95
CCND3-223ENST00000616010 LCE3AQ5TA76 89 aa9.09□□□□□ -0.95
CCND3-223ENST00000616010 KRTAP4-8A0A0G2JLE6 195 aa9.07□□□□□ -0.96
CCND3-223ENST00000616010 KRTAP4-8Q9BYQ9 185 aa9.07□□□□□ -0.96
CCND3-223ENST00000616010 MACF1Q9UPN3 7388 aaKnown RBP9.02□□□□□ -0.97
CCND3-223ENST00000616010 KRTAP23-1A1A580 65 aa9□□□□□ -0.97
CCND3-223ENST00000616010 PP632Q6XCG6 107 aa8.97□□□□□ -0.97
CCND3-223ENST00000616010 KRTAP8-1Q8IUC2 63 aa8.88□□□□□ -0.99
CCND3-223ENST00000616010 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.8□□□□□ -1
CCND3-223ENST00000616010 SYNE2Q8WXH0 6885 aaKnown RBP8.79□□□□□ -1
CCND3-223ENST00000616010 KRTAP19-5Q3LI72 72 aa8.78□□□□□ -1
CCND3-223ENST00000616010 KRTAP12-3P60328 96 aa8.71□□□□□ -1.01
CCND3-223ENST00000616010 KRTAP19-7Q3SYF9 63 aa8.71□□□□□ -1.02
CCND3-223ENST00000616010 SPRR2FQ96RM1 72 aa8.61□□□□□ -1.03
CCND3-223ENST00000616010 MT1EP04732 61 aa8.58□□□□□ -1.04
CCND3-223ENST00000616010 KRTAP5-9P26371 169 aa8.55□□□□□ -1.04
CCND3-223ENST00000616010 KRTAP6-3Q3LI67 103 aa8.5□□□□□ -1.05
CCND3-223ENST00000616010 MUC12Q9UKN1 5478 aa8.5□□□□□ -1.05
CCND3-223ENST00000616010 KRTAP15-1Q3LI76 137 aa8.46□□□□□ -1.05
CCND3-223ENST00000616010 KRTAP9-7A8MTY7 169 aa8.39□□□□□ -1.07
CCND3-223ENST00000616010 MT1LQ93083 61 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms