RNA–Protein interactions for RNA: ENST00000614285.4

CACNA1A-214, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-214ENST00000614285 KRTAP3-3Q9BYR6 98 aa7.22□□□□□ -1.25
CACNA1A-214ENST00000614285 CMYA5Q8N3K9 4069 aa7.19□□□□□ -1.26
CACNA1A-214ENST00000614285 LORP23490 312 aaPredicted RBP7.19□□□□□ -1.26
CACNA1A-214ENST00000614285 FRAS1Q86XX4 4008 aa7.04□□□□□ -1.28
CACNA1A-214ENST00000614285 KMT2AQ03164 3969 aa6.97□□□□□ -1.29
CACNA1A-214ENST00000614285 DNAH7Q8WXX0 4024 aa6.96□□□□□ -1.29
CACNA1A-214ENST00000614285 DNAH3Q8TD57 4116 aa6.94□□□□□ -1.3
CACNA1A-214ENST00000614285 MT1HL1P0DM35 61 aa6.93□□□□□ -1.3
CACNA1A-214ENST00000614285 ZNF469Q96JG9 3925 aaPredicted RBP6.92□□□□□ -1.3
CACNA1A-214ENST00000614285 ANK2Q01484 3957 aa6.9□□□□□ -1.31
CACNA1A-214ENST00000614285 DNAH2Q9P225 4427 aa6.86□□□□□ -1.31
CACNA1A-214ENST00000614285 KRTAP10-4P60372 401 aaPredicted RBP6.85□□□□□ -1.31
CACNA1A-214ENST00000614285 VPS13BQ7Z7G8 4022 aa6.78□□□□□ -1.32
CACNA1A-214ENST00000614285 HECTD4Q9Y4D8 3996 aa6.76□□□□□ -1.33
CACNA1A-214ENST00000614285 DNAH1Q9P2D7 4330 aa6.74□□□□□ -1.33
CACNA1A-214ENST00000614285 SPRR2FQ96RM1 72 aa6.72□□□□□ -1.33
CACNA1A-214ENST00000614285 HUWE1Q7Z6Z7 4374 aaKnown RBP6.7□□□□□ -1.34
CACNA1A-214ENST00000614285 DNAH6Q9C0G6 4158 aa6.66□□□□□ -1.34
CACNA1A-214ENST00000614285 KRTAP19-4Q3LI73 84 aa6.65□□□□□ -1.35
CACNA1A-214ENST00000614285 LCE3CQ5T5A8 94 aa6.62□□□□□ -1.35
CACNA1A-214ENST00000614285 FLGP20930 4061 aaPredicted RBP6.58□□□□□ -1.36
CACNA1A-214ENST00000614285 LCE3BQ5TA77 95 aa6.55□□□□□ -1.36
CACNA1A-214ENST00000614285 KRTAP19-5Q3LI72 72 aa6.52□□□□□ -1.37
CACNA1A-214ENST00000614285 ANK3Q12955 4377 aaKnown RBP6.47□□□□□ -1.37
CACNA1A-214ENST00000614285 KRTAP4-5Q9BYR2 181 aa6.45□□□□□ -1.38
CACNA1A-214ENST00000614285 SPRR2GQ9BYE4 73 aa6.43□□□□□ -1.38
CACNA1A-214ENST00000614285 KRTAP12-4P60329 112 aa6.39□□□□□ -1.39
CACNA1A-214ENST00000614285 SPRR2EP22531 72 aa6.32□□□□□ -1.4
CACNA1A-214ENST00000614285 SPRR2BP35325 72 aa6.32□□□□□ -1.4
CACNA1A-214ENST00000614285 SPRR2AP35326 72 aa6.32□□□□□ -1.4
CACNA1A-214ENST00000614285 MT1HP80294 61 aa6.25□□□□□ -1.41
CACNA1A-214ENST00000614285 PRKDCP78527 4128 aaKnown RBP6.13□□□□□ -1.43
CACNA1A-214ENST00000614285 LCE2BO14633 110 aa6.13□□□□□ -1.43
CACNA1A-214ENST00000614285 SPRR2DP22532 72 aa6.12□□□□□ -1.43
CACNA1A-214ENST00000614285 MT2AP02795 61 aa6.12□□□□□ -1.43
CACNA1A-214ENST00000614285 LCE3DQ9BYE3 92 aa6.1□□□□□ -1.43
CACNA1A-214ENST00000614285 MT3P25713 68 aa6.05□□□□□ -1.44
CACNA1A-214ENST00000614285 LCE3EQ5T5B0 92 aa6.04□□□□□ -1.44
CACNA1A-214ENST00000614285 MT1GP13640 62 aa6.03□□□□□ -1.44
CACNA1A-214ENST00000614285 FAT2Q9NYQ8 4349 aa6.02□□□□□ -1.45
CACNA1A-214ENST00000614285 DNAH8Q96JB1 4490 aa5.95□□□□□ -1.46
CACNA1A-214ENST00000614285 MT1FP04733 61 aa5.93□□□□□ -1.46
CACNA1A-214ENST00000614285 KRTAP4-1Q9BYQ7 146 aa5.91□□□□□ -1.46
CACNA1A-214ENST00000614285 VPS13DQ5THJ4 4388 aa5.87□□□□□ -1.47
CACNA1A-214ENST00000614285 DNAH10Q8IVF4 4471 aa5.85□□□□□ -1.47
CACNA1A-214ENST00000614285 LCE2CQ5TA81 110 aa5.84□□□□□ -1.47
CACNA1A-214ENST00000614285 DNAH17Q9UFH2 4485 aa5.84□□□□□ -1.48
CACNA1A-214ENST00000614285 DYNC2H1Q8NCM8 4307 aaKnown RBP5.75□□□□□ -1.49
CACNA1A-214ENST00000614285 DNAH9Q9NYC9 4486 aa5.75□□□□□ -1.49
CACNA1A-214ENST00000614285 PKHD1L1Q86WI1 4243 aa5.72□□□□□ -1.49
CACNA1A-214ENST00000614285 PKHD1P08F94 4074 aa5.72□□□□□ -1.49
CACNA1A-214ENST00000614285 PRM1P04553 51 aa5.7□□□□□ -1.5
CACNA1A-214ENST00000614285 LCE2DQ5TA82 110 aaPredicted RBP5.68□□□□□ -1.5
CACNA1A-214ENST00000614285 DNAH11Q96DT5 4516 aa5.65□□□□□ -1.5
CACNA1A-214ENST00000614285 KRTAP19-8Q3LI54 63 aa5.64□□□□□ -1.51
CACNA1A-214ENST00000614285 LCE1BQ5T7P3 118 aa5.61□□□□□ -1.51
CACNA1A-214ENST00000614285 MT1XP80297 61 aa5.58□□□□□ -1.52
CACNA1A-214ENST00000614285 SPRR5A0A1B0GTR4 108 aa5.56□□□□□ -1.52
CACNA1A-214ENST00000614285 MT4P47944 62 aa5.56□□□□□ -1.52
CACNA1A-214ENST00000614285 LCE1DQ5T752 114 aa5.53□□□□□ -1.52
CACNA1A-214ENST00000614285 DNAH5Q8TE73 4624 aa5.52□□□□□ -1.53
CACNA1A-214ENST00000614285 PLECQ15149 4684 aaKnown RBP5.52□□□□□ -1.53
CACNA1A-214ENST00000614285 KRTAP19-1Q8IUB9 90 aa5.49□□□□□ -1.53
CACNA1A-214ENST00000614285 MT1LQ93083 61 aa5.48□□□□□ -1.53
CACNA1A-214ENST00000614285 LRP1Q07954 4544 aaKnown RBP5.44□□□□□ -1.54
CACNA1A-214ENST00000614285 PKD1P98161 4303 aa5.44□□□□□ -1.54
CACNA1A-214ENST00000614285 FAT1Q14517 4588 aa5.41□□□□□ -1.54
CACNA1A-214ENST00000614285 STARD9Q9P2P6 4700 aa5.41□□□□□ -1.54
CACNA1A-214ENST00000614285 KRTAP4-8A0A0G2JLE6 195 aa5.41□□□□□ -1.54
CACNA1A-214ENST00000614285 KRTAP4-8Q9BYQ9 185 aa5.41□□□□□ -1.54
CACNA1A-214ENST00000614285 KRTAP19-3Q7Z4W3 81 aa5.41□□□□□ -1.54
CACNA1A-214ENST00000614285 LRP1BQ9NZR2 4599 aa5.3□□□□□ -1.56
CACNA1A-214ENST00000614285 APOBP04114 4563 aaKnown RBP5.28□□□□□ -1.56
CACNA1A-214ENST00000614285 LCE5AQ5TCM9 118 aa5.27□□□□□ -1.57
CACNA1A-214ENST00000614285 MT1BP07438 61 aa5.21□□□□□ -1.58
CACNA1A-214ENST00000614285 SACSQ9NZJ4 4579 aa5.17□□□□□ -1.58
CACNA1A-214ENST00000614285 KRTAP9-8Q9BYQ0 159 aa5.16□□□□□ -1.58
CACNA1A-214ENST00000614285 MYCBP2O75592 4640 aa5.16□□□□□ -1.58
CACNA1A-214ENST00000614285 TNXBP22105 4242 aa5.16□□□□□ -1.58
CACNA1A-214ENST00000614285 KRTAP4-7Q9BYR0 210 aa5.13□□□□□ -1.59
CACNA1A-214ENST00000614285 LCE1CQ5T751 118 aa5.12□□□□□ -1.59
CACNA1A-214ENST00000614285 LCE1EQ5T753 118 aa5.12□□□□□ -1.59
CACNA1A-214ENST00000614285 LCE1FQ5T754 118 aa5.12□□□□□ -1.59
CACNA1A-214ENST00000614285 LCE1AQ5T7P2 110 aa5.12□□□□□ -1.59
CACNA1A-214ENST00000614285 MT1EP04732 61 aa5.11□□□□□ -1.59
CACNA1A-214ENST00000614285 FAT3Q8TDW7 4589 aa5.1□□□□□ -1.59
CACNA1A-214ENST00000614285 HSPG2P98160 4391 aa5.09□□□□□ -1.59
CACNA1A-214ENST00000614285 LOC100996750A0A140TA64 210 aa5.04□□□□□ -1.6
CACNA1A-214ENST00000614285 KRTAP9-3Q9BYQ3 159 aa5.03□□□□□ -1.6
CACNA1A-214ENST00000614285 MT1MQ8N339 61 aa5.01□□□□□ -1.61
CACNA1A-214ENST00000614285 DYNC1H1Q14204 4646 aaKnown RBP4.99□□□□□ -1.61
CACNA1A-214ENST00000614285 LCE4AQ5TA78 99 aa4.95□□□□□ -1.62
CACNA1A-214ENST00000614285 SYNE2Q8WXH0 6885 aaKnown RBP4.9□□□□□ -1.62
CACNA1A-214ENST00000614285 RYR1P21817 5038 aa4.84□□□□□ -1.63
CACNA1A-214ENST00000614285 KRTAP4-9Q9BYQ8 210 aa4.84□□□□□ -1.64
CACNA1A-214ENST00000614285 KRTAP2-3P0C7H8 128 aa4.81□□□□□ -1.64
CACNA1A-214ENST00000614285 KRTAP2-4Q9BYR9 128 aa4.81□□□□□ -1.64
CACNA1A-214ENST00000614285 KRTAP2-1Q9BYU5 128 aa4.81□□□□□ -1.64
CACNA1A-214ENST00000614285 DNHD1Q96M86 4753 aa4.81□□□□□ -1.64
CACNA1A-214ENST00000614285 LPAP08519 4548 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms