RNA–Protein interactions for RNA: ENST00000612991.4

RELA-226, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 1 (best) BASIC

Gene RELA, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-226ENST00000612991 LCA10Q71F78 164 aa9.42□□□□□ -0.9
RELA-226ENST00000612991 A0A1B0GU69 56 aa9.42□□□□□ -0.9
RELA-226ENST00000612991 HMCN2Q8NDA2 5059 aa9.41□□□□□ -0.9
RELA-226ENST00000612991 COX6B2Q6YFQ2 88 aa9.36□□□□□ -0.91
RELA-226ENST00000612991 CDC42SE1Q9NRR8 79 aa9.3□□□□□ -0.92
RELA-226ENST00000612991 SPTSSBQ8NFR3 76 aa9.3□□□□□ -0.92
RELA-226ENST00000612991 SEC61GP60059 68 aa9.19□□□□□ -0.94
RELA-226ENST00000612991 SEC61BP60468 96 aaKnown RBP9.19□□□□□ -0.94
RELA-226ENST00000612991 PMAIP1Q13794 54 aa9.17□□□□□ -0.94
RELA-226ENST00000612991 UQCR11O14957 56 aa9.16□□□□□ -0.94
RELA-226ENST00000612991 MUC2Q02817 5179 aa9.15□□□□□ -0.95
RELA-226ENST00000612991 KRTAP4-1Q9BYQ7 146 aa9.15□□□□□ -0.95
RELA-226ENST00000612991 MIR22HGQ0VDD5 57 aa9.13□□□□□ -0.95
RELA-226ENST00000612991 KRTAP3-3Q9BYR6 98 aa9.12□□□□□ -0.95
RELA-226ENST00000612991 MUC17Q685J3 4493 aa9.11□□□□□ -0.95
RELA-226ENST00000612991 SPATA8Q6RVD6 105 aa9.11□□□□□ -0.95
RELA-226ENST00000612991 UBR4Q5T4S7 5183 aa9.09□□□□□ -0.95
RELA-226ENST00000612991 S4R3F8 94 aa9.08□□□□□ -0.96
RELA-226ENST00000612991 A6NN06 94 aa9.03□□□□□ -0.96
RELA-226ENST00000612991 H1FX-AS1Q4G0G2 97 aa9.02□□□□□ -0.96
RELA-226ENST00000612991 A0A1B0GU33 70 aa9.01□□□□□ -0.97
RELA-226ENST00000612991 H0YAA0 97 aa9□□□□□ -0.97
RELA-226ENST00000612991 RNF213Q63HN8 5207 aa8.98□□□□□ -0.97
RELA-226ENST00000612991 RBM12B-AS1Q9P1G2 102 aa8.97□□□□□ -0.97
RELA-226ENST00000612991 KRTAP10-6P60371 365 aaPredicted RBP8.91□□□□□ -0.98
RELA-226ENST00000612991 KRTAP3-2Q9BYR7 98 aa8.89□□□□□ -0.99
RELA-226ENST00000612991 KRTAP19-2Q3LHN2 52 aa8.84□□□□□ -0.99
RELA-226ENST00000612991 P0C880 135 aa8.84□□□□□ -0.99
RELA-226ENST00000612991 KTN1-AS1Q86SY8 53 aa8.84□□□□□ -0.99
RELA-226ENST00000612991 KRTAP13-4Q3LI77 160 aa8.8□□□□□ -1
RELA-226ENST00000612991 CSAG1Q6PB30 78 aa8.79□□□□□ -1
RELA-226ENST00000612991 ADM2Q7Z4H4 148 aa8.79□□□□□ -1
RELA-226ENST00000612991 FAT4Q6V0I7 4981 aa8.75□□□□□ -1.01
RELA-226ENST00000612991 A0A0D9SG42 100 aa8.72□□□□□ -1.01
RELA-226ENST00000612991 LCE2CQ5TA81 110 aa8.68□□□□□ -1.02
RELA-226ENST00000612991 PRAC1Q96KF2 57 aa8.68□□□□□ -1.02
RELA-226ENST00000612991 FLGP20930 4061 aaPredicted RBP8.64□□□□□ -1.03
RELA-226ENST00000612991 K7ERS5 55 aa8.56□□□□□ -1.04
RELA-226ENST00000612991 MT1HP80294 61 aa8.5□□□□□ -1.05
RELA-226ENST00000612991 KRTAP12-2P59991 146 aa8.47□□□□□ -1.05
RELA-226ENST00000612991 LORP23490 312 aaPredicted RBP8.46□□□□□ -1.05
RELA-226ENST00000612991 M0QZ58 72 aa8.45□□□□□ -1.06
RELA-226ENST00000612991 SPINT4Q6UDR6 99 aa8.43□□□□□ -1.06
RELA-226ENST00000612991 LINC01554Q52M75 96 aa8.42□□□□□ -1.06
RELA-226ENST00000612991 KRTAP12-1P59990 96 aa8.41□□□□□ -1.06
RELA-226ENST00000612991 M0R2T5 61 aa8.41□□□□□ -1.06
RELA-226ENST00000612991 R4GN34 69 aa8.41□□□□□ -1.06
RELA-226ENST00000612991 CRIPTQ9P021 101 aa8.36□□□□□ -1.07
RELA-226ENST00000612991 ROMO1P60602 79 aa8.33□□□□□ -1.08
RELA-226ENST00000612991 LCE2AQ5TA79 106 aaPredicted RBP8.22□□□□□ -1.09
RELA-226ENST00000612991 KRTAP25-1Q3LHN0 102 aa8.22□□□□□ -1.09
RELA-226ENST00000612991 KRTAP9-8Q9BYQ0 159 aa8.18□□□□□ -1.1
RELA-226ENST00000612991 MT2AP02795 61 aa8.14□□□□□ -1.11
RELA-226ENST00000612991 MT1FP04733 61 aa8.11□□□□□ -1.11
RELA-226ENST00000612991 C10orf95Q9H7T3 257 aa8.1□□□□□ -1.11
RELA-226ENST00000612991 KRTAP10-10P60014 251 aa8.07□□□□□ -1.12
RELA-226ENST00000612991 H3BS24 57 aa7.99□□□□□ -1.13
RELA-226ENST00000612991 CAMK2N1Q7Z7J9 78 aa7.94□□□□□ -1.14
RELA-226ENST00000612991 KRTAP19-1Q8IUB9 90 aa7.92□□□□□ -1.14
RELA-226ENST00000612991 SPRR2GQ9BYE4 73 aa7.89□□□□□ -1.15
RELA-226ENST00000612991 KRTAP9-3Q9BYQ3 159 aa7.87□□□□□ -1.15
RELA-226ENST00000612991 LCE2BO14633 110 aa7.71□□□□□ -1.18
RELA-226ENST00000612991 PLAC4Q8WY50 150 aa7.7□□□□□ -1.18
RELA-226ENST00000612991 KRTAP19-8Q3LI54 63 aa7.68□□□□□ -1.18
RELA-226ENST00000612991 MT1BP07438 61 aa7.64□□□□□ -1.19
RELA-226ENST00000612991 USH2AO75445 5202 aa7.63□□□□□ -1.19
RELA-226ENST00000612991 TNP1P09430 55 aa7.55□□□□□ -1.2
RELA-226ENST00000612991 FSIP2Q5CZC0 6907 aa7.5□□□□□ -1.21
RELA-226ENST00000612991 PP632Q6XCG6 107 aa7.45□□□□□ -1.22
RELA-226ENST00000612991 LCE2DQ5TA82 110 aaPredicted RBP7.44□□□□□ -1.22
RELA-226ENST00000612991 KRTAP15-1Q3LI76 137 aa7.39□□□□□ -1.23
RELA-226ENST00000612991 MT1XP80297 61 aa7.38□□□□□ -1.23
RELA-226ENST00000612991 KRTAP10-5P60370 271 aa7.38□□□□□ -1.23
RELA-226ENST00000612991 SSPOA2VEC9 5147 aa7.37□□□□□ -1.23
RELA-226ENST00000612991 KRTAP9-2Q9BYQ4 174 aa7.28□□□□□ -1.24
RELA-226ENST00000612991 KRTAP23-1A1A580 65 aa7.27□□□□□ -1.24
RELA-226ENST00000612991 LCE3AQ5TA76 89 aa7.27□□□□□ -1.25
RELA-226ENST00000612991 PRO2289Q9P1D8 64 aa7.21□□□□□ -1.25
RELA-226ENST00000612991 KRTAP19-6Q3LI70 58 aa7.18□□□□□ -1.26
RELA-226ENST00000612991 KRTAP10-7P60409 375 aaPredicted RBP7.17□□□□□ -1.26
RELA-226ENST00000612991 KRTAP10-12P60413 245 aa7.1□□□□□ -1.27
RELA-226ENST00000612991 NDUFAF8A1L188 74 aa7.08□□□□□ -1.28
RELA-226ENST00000612991 FCGBPQ9Y6R7 5405 aaPredicted RBP7.07□□□□□ -1.28
RELA-226ENST00000612991 KRTAP8-1Q8IUC2 63 aa7.02□□□□□ -1.29
RELA-226ENST00000612991 KMT2DO14686 5537 aa7.01□□□□□ -1.29
RELA-226ENST00000612991 CRCT1Q9UGL9 99 aa6.98□□□□□ -1.29
RELA-226ENST00000612991 KRTAP12-3P60328 96 aa6.92□□□□□ -1.3
RELA-226ENST00000612991 KRTAP4-8A0A0G2JLE6 195 aa6.89□□□□□ -1.31
RELA-226ENST00000612991 KRTAP4-8Q9BYQ9 185 aa6.89□□□□□ -1.31
RELA-226ENST00000612991 SPRR5A0A1B0GTR4 108 aa6.83□□□□□ -1.32
RELA-226ENST00000612991 LUZP6Q538Z0 58 aa6.81□□□□□ -1.32
RELA-226ENST00000612991 KRTAP19-5Q3LI72 72 aa6.79□□□□□ -1.32
RELA-226ENST00000612991 MACF1Q9UPN3 7388 aaKnown RBP6.76□□□□□ -1.33
RELA-226ENST00000612991 A0A0A0MQY5 61 aa6.73□□□□□ -1.33
RELA-226ENST00000612991 KRTAP9-6A0A140TA67 174 aa6.71□□□□□ -1.34
RELA-226ENST00000612991 SYNE2Q8WXH0 6885 aaKnown RBP6.61□□□□□ -1.35
RELA-226ENST00000612991 KRTAP19-7Q3SYF9 63 aa6.59□□□□□ -1.36
RELA-226ENST00000612991 MUC12Q9UKN1 5478 aa6.49□□□□□ -1.37
RELA-226ENST00000612991 LCE3CQ5T5A8 94 aa6.48□□□□□ -1.37
RELA-226ENST00000612991 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms