RNA–Protein interactions for RNA: ENST00000612991.4

RELA-226, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 1 (best) BASIC

Gene RELA, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-226ENST00000612991 NISCHQ9Y2I1 1504 aa40.71■■■■■ 4.11
RELA-226ENST00000612991 CCDC180Q9P1Z9 1646 aa35.55■■■■□ 3.28
RELA-226ENST00000612991 ZCCHC6Q5VYS8 1495 aaKnown RBP34.14■■■■□ 3.06
RELA-226ENST00000612991 ABCC9O60706 1549 aa33.97■■■■□ 3.03
RELA-226ENST00000612991 DCAF8L2P0C7V8 631 aa33.84■■■■□ 3.01
RELA-226ENST00000612991 DCAF1Q9Y4B6 1507 aa33.57■■■□□ 2.96
RELA-226ENST00000612991 MYO15BQ96JP2 1530 aa33.23■■■□□ 2.91
RELA-226ENST00000612991 SHROOM4Q9ULL8 1493 aa33.21■■■□□ 2.91
RELA-226ENST00000612991 NACADO15069 1562 aa33.16■■■□□ 2.9
RELA-226ENST00000612991 RB1CC1Q8TDY2 1594 aa32.96■■■□□ 2.87
RELA-226ENST00000612991 SCRIBQ14160 1630 aa32.79■■■□□ 2.84
RELA-226ENST00000612991 UNC13AQ9UPW8 1703 aa32.41■■■□□ 2.78
RELA-226ENST00000612991 BICRAQ9NZM4 1560 aa32.04■■■□□ 2.72
RELA-226ENST00000612991 PABPN1Q86U42 306 aaKnown RBP eCLIP32.03■■■□□ 2.724e-10■□□□□ 10.7
RELA-226ENST00000612991 SUPT5HO00267 1087 aaKnown RBP31.95■■■□□ 2.71
RELA-226ENST00000612991 CECR2Q9BXF3 1484 aa31.74■■■□□ 2.67
RELA-226ENST00000612991 RSF1Q96T23 1441 aaPredicted RBP31.52■■■□□ 2.64
RELA-226ENST00000612991 MROH2BQ7Z745 1585 aa31.5■■■□□ 2.63
RELA-226ENST00000612991 BAZ1AQ9NRL2 1556 aaPredicted RBP31.43■■■□□ 2.62
RELA-226ENST00000612991 SMARCA4P51532 1647 aa31.36■■■□□ 2.61
RELA-226ENST00000612991 WIZO95785 1651 aa31.26■■■□□ 2.59
RELA-226ENST00000612991 EIF4G1Q04637 1599 aaKnown RBP31.08■■■□□ 2.57
RELA-226ENST00000612991 PEG3Q9GZU2 1588 aa30.93■■■□□ 2.54
RELA-226ENST00000612991 ATAD2BQ9ULI0 1458 aa30.89■■■□□ 2.54
RELA-226ENST00000612991 TOP2AP11388 1531 aaKnown RBP30.83■■■□□ 2.53
RELA-226ENST00000612991 SMARCA2P51531 1590 aa30.82■■■□□ 2.52
RELA-226ENST00000612991 CHIC1Q5VXU3 224 aa30.72■■■□□ 2.51
RELA-226ENST00000612991 BAZ1BQ9UIG0 1483 aaKnown RBP30.7■■■□□ 2.51
RELA-226ENST00000612991 CC2D2AQ9P2K1 1620 aa30.7■■■□□ 2.51
RELA-226ENST00000612991 NCAPD3P42695 1498 aa30.63■■■□□ 2.49
RELA-226ENST00000612991 CCDC88BA6NC98 1476 aa30.56■■■□□ 2.48
RELA-226ENST00000612991 HMGXB3Q12766 1538 aa30.56■■■□□ 2.48
RELA-226ENST00000612991 DNAJC5BQ9UF47 199 aa30.23■■■□□ 2.43
RELA-226ENST00000612991 ABCC8Q09428 1581 aa29.92■■■□□ 2.38
RELA-226ENST00000612991 CFTRP13569 1480 aa29.91■■■□□ 2.38
RELA-226ENST00000612991 CADPSQ9ULU8 1353 aa29.85■■■□□ 2.37
RELA-226ENST00000612991 TRIM41Q8WV44 630 aa29.85■■■□□ 2.37
RELA-226ENST00000612991 LOC105371045A0A1W2PR82 267 aa29.78■■■□□ 2.36
RELA-226ENST00000612991 NESP48681 1621 aa29.77■■■□□ 2.36
RELA-226ENST00000612991 PRDM2Q13029 1718 aa29.75■■■□□ 2.35
RELA-226ENST00000612991 WRNQ14191 1432 aaPredicted RBP eCLIP29.66■■■□□ 2.34
RELA-226ENST00000612991 LAMC3Q9Y6N6 1575 aa29.63■■■□□ 2.33
RELA-226ENST00000612991 SYNJ1O43426 1573 aa29.6■■■□□ 2.33
RELA-226ENST00000612991 FANCD2Q9BXW9 1451 aa29.55■■■□□ 2.32
RELA-226ENST00000612991 FAM9AQ8IZU1 332 aaPredicted RBP29.55■■■□□ 2.32
RELA-226ENST00000612991 CUX1P39880 1505 aa29.46■■■□□ 2.31
RELA-226ENST00000612991 TOP2BQ02880 1626 aa29.44■■■□□ 2.3
RELA-226ENST00000612991 BIVM-ERCC5R4GMW8 1640 aa29.41■■■□□ 2.3
RELA-226ENST00000612991 PDS5BQ9NTI5 1447 aa29.4■■■□□ 2.3
RELA-226ENST00000612991 KIF21AQ7Z4S6 1674 aa29.39■■■□□ 2.3
RELA-226ENST00000612991 CEP164Q9UPV0 1460 aa29.37■■■□□ 2.29
RELA-226ENST00000612991 EHMT2Q96KQ7 1210 aa29.32■■■□□ 2.28
RELA-226ENST00000612991 SOGA1O94964 1423 aa29.29■■■□□ 2.28
RELA-226ENST00000612991 RUSC2Q8N2Y8 1516 aa29.22■■■□□ 2.27
RELA-226ENST00000612991 URB2Q14146 1524 aaKnown RBP29.22■■■□□ 2.27
RELA-226ENST00000612991 DNMBPQ6XZF7 1577 aa29.21■■■□□ 2.27
RELA-226ENST00000612991 TOPBP1Q92547 1522 aa29.2■■■□□ 2.27
RELA-226ENST00000612991 FGD5Q6ZNL6 1462 aa29.16■■■□□ 2.26
RELA-226ENST00000612991 ERCC6Q03468 1493 aa29.09■■■□□ 2.25
RELA-226ENST00000612991 POLA1P09884 1462 aaPredicted RBP29.05■■■□□ 2.24
RELA-226ENST00000612991 MRC2Q9UBG0 1479 aa29.05■■■□□ 2.24
RELA-226ENST00000612991 PCGF6Q9BYE7 350 aa29.03■■■□□ 2.24
RELA-226ENST00000612991 EEA1Q15075 1411 aa29.01■■■□□ 2.24
RELA-226ENST00000612991 RAD54L2Q9Y4B4 1467 aa29■■■□□ 2.23
RELA-226ENST00000612991 CSRNP3Q8WYN3 585 aa28.98■■■□□ 2.23
RELA-226ENST00000612991 CUX2O14529 1486 aa28.93■■■□□ 2.22
RELA-226ENST00000612991 THOC2Q8NI27 1593 aaKnown RBP28.92■■■□□ 2.22
RELA-226ENST00000612991 WDR62O43379 1518 aa28.91■■■□□ 2.22
RELA-226ENST00000612991 KIF27Q86VH2 1401 aa28.9■■■□□ 2.22
RELA-226ENST00000612991 ABCA10Q8WWZ4 1543 aa28.85■■■□□ 2.21
RELA-226ENST00000612991 WDR97A6NE52 1622 aa28.81■■■□□ 2.2
RELA-226ENST00000612991 TARBP1Q13395 1621 aaKnown RBP28.79■■■□□ 2.2
RELA-226ENST00000612991 TDRD9Q8NDG6 1382 aaKnown RBP28.74■■■□□ 2.19
RELA-226ENST00000612991 KIF21BO75037 1637 aa28.72■■■□□ 2.19
RELA-226ENST00000612991 IGF1RP08069 1367 aa28.71■■■□□ 2.19
RELA-226ENST00000612991 RAPGEF2Q9Y4G8 1499 aa28.68■■■□□ 2.18
RELA-226ENST00000612991 GOLGA3Q08378 1498 aa28.67■■■□□ 2.18
RELA-226ENST00000612991 PRXQ9BXM0 1461 aa28.66■■■□□ 2.18
RELA-226ENST00000612991 ABCA5Q8WWZ7 1642 aa28.66■■■□□ 2.18
RELA-226ENST00000612991 IFT140Q96RY7 1462 aa28.65■■■□□ 2.18
RELA-226ENST00000612991 TRIM26Q12899 539 aaPredicted RBP28.64■■■□□ 2.18
RELA-226ENST00000612991 UBTFP17480 764 aaKnown RBP28.63■■■□□ 2.17
RELA-226ENST00000612991 GAPVD1Q14C86 1478 aa28.62■■■□□ 2.17
RELA-226ENST00000612991 ZNF608Q9ULD9 1512 aaPredicted RBP28.61■■■□□ 2.17
RELA-226ENST00000612991 AQRO60306 1485 aaKnown RBP eCLIP28.6■■■□□ 2.175e-7■■■■■ 31.2
RELA-226ENST00000612991 CARMIL1Q5VZK9 1371 aa28.55■■■□□ 2.16
RELA-226ENST00000612991 ERICH3Q5RHP9 1530 aa28.54■■■□□ 2.16
RELA-226ENST00000612991 TNIKQ9UKE5 1360 aa28.54■■■□□ 2.16
RELA-226ENST00000612991 HRCP23327 699 aa28.52■■■□□ 2.16
RELA-226ENST00000612991 PBRM1Q86U86 1689 aa28.5■■■□□ 2.15
RELA-226ENST00000612991 PPARGC1BQ86YN6 1023 aaKnown RBP28.49■■■□□ 2.15
RELA-226ENST00000612991 EIF4G3O43432 1585 aaKnown RBP28.47■■■□□ 2.15
RELA-226ENST00000612991 CEP162Q5TB80 1403 aa28.46■■■□□ 2.15
RELA-226ENST00000612991 CUL7Q14999 1698 aa28.46■■■□□ 2.15
RELA-226ENST00000612991 GRIN2BQ13224 1484 aa28.4■■■□□ 2.14
RELA-226ENST00000612991 RANGAP1P46060 587 aaPredicted RBP28.36■■■□□ 2.13
RELA-226ENST00000612991 ADAMTS12P58397 1594 aa28.3■■■□□ 2.12
RELA-226ENST00000612991 SNAPC4Q5SXM2 1469 aa28.29■■■□□ 2.12
RELA-226ENST00000612991 FHAD1B1AJZ9 1412 aa28.27■■■□□ 2.12
RELA-226ENST00000612991 CLIP1P30622 1438 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms