RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 LRP1Q07954 4544 aaKnown RBP10.22□□□□□ -0.77
SEMA3B-210ENST00000611067 H3BS24 57 aa10.22□□□□□ -0.77
SEMA3B-210ENST00000611067 C20orf166-AS1Q96NR2 134 aa10.22□□□□□ -0.77
SEMA3B-210ENST00000611067 TNXBP22105 4242 aa10.17□□□□□ -0.78
SEMA3B-210ENST00000611067 C9orf92A6NGG3 77 aa10.14□□□□□ -0.79
SEMA3B-210ENST00000611067 FAT3Q8TDW7 4589 aa10.13□□□□□ -0.79
SEMA3B-210ENST00000611067 MT1HL1P0DM35 61 aa10.09□□□□□ -0.79
SEMA3B-210ENST00000611067 DMBT1Q9UGM3 2413 aaPredicted RBP10.09□□□□□ -0.79
SEMA3B-210ENST00000611067 MYCBP2O75592 4640 aa10.08□□□□□ -0.8
SEMA3B-210ENST00000611067 K7ERS5 55 aa10.08□□□□□ -0.8
SEMA3B-210ENST00000611067 ROMO1P60602 79 aa10.07□□□□□ -0.8
SEMA3B-210ENST00000611067 KRTAP4-5Q9BYR2 181 aa10.05□□□□□ -0.8
SEMA3B-210ENST00000611067 COX6B2Q6YFQ2 88 aa10.05□□□□□ -0.8
SEMA3B-210ENST00000611067 CRIPTQ9P021 101 aa9.94□□□□□ -0.82
SEMA3B-210ENST00000611067 BIRC6Q9NR09 4857 aa9.91□□□□□ -0.82
SEMA3B-210ENST00000611067 RPL37P61927 97 aaKnown RBP9.86□□□□□ -0.83
SEMA3B-210ENST00000611067 KRTAP10-6P60371 365 aaPredicted RBP9.84□□□□□ -0.83
SEMA3B-210ENST00000611067 ABCA13Q86UQ4 5058 aa9.83□□□□□ -0.84
SEMA3B-210ENST00000611067 J3QL48 77 aa9.83□□□□□ -0.84
SEMA3B-210ENST00000611067 HERC2O95714 4834 aa9.81□□□□□ -0.84
SEMA3B-210ENST00000611067 XP32Q5T750 250 aa9.79□□□□□ -0.84
SEMA3B-210ENST00000611067 KRTAP3-3Q9BYR6 98 aa9.79□□□□□ -0.84
SEMA3B-210ENST00000611067 KRTAP13-4Q3LI77 160 aa9.77□□□□□ -0.84
SEMA3B-210ENST00000611067 P0C880 135 aa9.76□□□□□ -0.85
SEMA3B-210ENST00000611067 TPRXLQ17RH7 258 aa9.73□□□□□ -0.85
SEMA3B-210ENST00000611067 KRTAP3-2Q9BYR7 98 aa9.73□□□□□ -0.85
SEMA3B-210ENST00000611067 A0A0D9SG42 100 aa9.71□□□□□ -0.85
SEMA3B-210ENST00000611067 S4R3F8 94 aa9.64□□□□□ -0.87
SEMA3B-210ENST00000611067 SPINT4Q6UDR6 99 aa9.61□□□□□ -0.87
SEMA3B-210ENST00000611067 C10orf95Q9H7T3 257 aa9.56□□□□□ -0.88
SEMA3B-210ENST00000611067 LPAP08519 4548 aa9.5□□□□□ -0.89
SEMA3B-210ENST00000611067 KRTAP12-2P59991 146 aa9.49□□□□□ -0.89
SEMA3B-210ENST00000611067 LRP2P98164 4655 aa9.48□□□□□ -0.89
SEMA3B-210ENST00000611067 PCLOQ9Y6V0 5065 aa9.47□□□□□ -0.89
SEMA3B-210ENST00000611067 KRTAP15-1Q3LI76 137 aa9.45□□□□□ -0.9
SEMA3B-210ENST00000611067 KRTAP12-1P59990 96 aa9.42□□□□□ -0.9
SEMA3B-210ENST00000611067 SEC61BP60468 96 aaKnown RBP9.41□□□□□ -0.9
SEMA3B-210ENST00000611067 NDUFAF8A1L188 74 aa9.31□□□□□ -0.92
SEMA3B-210ENST00000611067 M0QZ58 72 aa9.3□□□□□ -0.92
SEMA3B-210ENST00000611067 HERC1Q15751 4861 aa9.26□□□□□ -0.93
SEMA3B-210ENST00000611067 HMCN2Q8NDA2 5059 aa9.16□□□□□ -0.94
SEMA3B-210ENST00000611067 KRTAP4-1Q9BYQ7 146 aa9.15□□□□□ -0.95
SEMA3B-210ENST00000611067 MUC17Q685J3 4493 aa9.12□□□□□ -0.95
SEMA3B-210ENST00000611067 R4GN34 69 aa8.96□□□□□ -0.97
SEMA3B-210ENST00000611067 MUC2Q02817 5179 aa8.94□□□□□ -0.98
SEMA3B-210ENST00000611067 KRTAP19-2Q3LHN2 52 aa8.89□□□□□ -0.99
SEMA3B-210ENST00000611067 PLAC4Q8WY50 150 aa8.86□□□□□ -0.99
SEMA3B-210ENST00000611067 UBR4Q5T4S7 5183 aa8.81□□□□□ -1
SEMA3B-210ENST00000611067 LORP23490 312 aaPredicted RBP8.77□□□□□ -1.01
SEMA3B-210ENST00000611067 RNF213Q63HN8 5207 aa8.72□□□□□ -1.01
SEMA3B-210ENST00000611067 FLGP20930 4061 aaPredicted RBP8.7□□□□□ -1.02
SEMA3B-210ENST00000611067 PP632Q6XCG6 107 aa8.67□□□□□ -1.02
SEMA3B-210ENST00000611067 LCE2CQ5TA81 110 aa8.65□□□□□ -1.03
SEMA3B-210ENST00000611067 LUZP6Q538Z0 58 aa8.54□□□□□ -1.04
SEMA3B-210ENST00000611067 CAMK2N1Q7Z7J9 78 aa8.54□□□□□ -1.04
SEMA3B-210ENST00000611067 FAT4Q6V0I7 4981 aa8.54□□□□□ -1.04
SEMA3B-210ENST00000611067 M0R2T5 61 aa8.52□□□□□ -1.05
SEMA3B-210ENST00000611067 MT1HP80294 61 aa8.5□□□□□ -1.05
SEMA3B-210ENST00000611067 A0A0A0MQY5 61 aa8.36□□□□□ -1.07
SEMA3B-210ENST00000611067 KRTAP23-1A1A580 65 aa8.31□□□□□ -1.08
SEMA3B-210ENST00000611067 TNP1P09430 55 aa8.29□□□□□ -1.08
SEMA3B-210ENST00000611067 SPRR5A0A1B0GTR4 108 aa8.23□□□□□ -1.09
SEMA3B-210ENST00000611067 MT2AP02795 61 aa8.19□□□□□ -1.1
SEMA3B-210ENST00000611067 KRTAP9-8Q9BYQ0 159 aa8.18□□□□□ -1.1
SEMA3B-210ENST00000611067 KRTAP10-10P60014 251 aa8.18□□□□□ -1.1
SEMA3B-210ENST00000611067 MT1FP04733 61 aa8.15□□□□□ -1.1
SEMA3B-210ENST00000611067 SPRR2GQ9BYE4 73 aa8.09□□□□□ -1.11
SEMA3B-210ENST00000611067 KRTAP19-1Q8IUB9 90 aa8.05□□□□□ -1.12
SEMA3B-210ENST00000611067 LCE2AQ5TA79 106 aaPredicted RBP8.04□□□□□ -1.12
SEMA3B-210ENST00000611067 KRTAP9-3Q9BYQ3 159 aa7.88□□□□□ -1.15
SEMA3B-210ENST00000611067 KRTAP19-8Q3LI54 63 aa7.84□□□□□ -1.15
SEMA3B-210ENST00000611067 LCE3AQ5TA76 89 aa7.8□□□□□ -1.16
SEMA3B-210ENST00000611067 MT1BP07438 61 aa7.73□□□□□ -1.17
SEMA3B-210ENST00000611067 LCE2BO14633 110 aa7.65□□□□□ -1.18
SEMA3B-210ENST00000611067 KRTAP8-1Q8IUC2 63 aa7.63□□□□□ -1.19
SEMA3B-210ENST00000611067 PRO2289Q9P1D8 64 aa7.62□□□□□ -1.19
SEMA3B-210ENST00000611067 INE1O15225 51 aa7.53□□□□□ -1.2
SEMA3B-210ENST00000611067 MT1XP80297 61 aa7.52□□□□□ -1.21
SEMA3B-210ENST00000611067 KRTAP10-5P60370 271 aa7.51□□□□□ -1.21
SEMA3B-210ENST00000611067 USH2AO75445 5202 aa7.43□□□□□ -1.22
SEMA3B-210ENST00000611067 KRTAP12-3P60328 96 aa7.41□□□□□ -1.22
SEMA3B-210ENST00000611067 KRTAP10-12P60413 245 aa7.37□□□□□ -1.23
SEMA3B-210ENST00000611067 LCE2DQ5TA82 110 aaPredicted RBP7.25□□□□□ -1.25
SEMA3B-210ENST00000611067 KRTAP10-7P60409 375 aaPredicted RBP7.24□□□□□ -1.25
SEMA3B-210ENST00000611067 SSPOA2VEC9 5147 aa7.15□□□□□ -1.26
SEMA3B-210ENST00000611067 KRTAP19-6Q3LI70 58 aa7.14□□□□□ -1.27
SEMA3B-210ENST00000611067 FSIP2Q5CZC0 6907 aa7.12□□□□□ -1.27
SEMA3B-210ENST00000611067 LCE3CQ5T5A8 94 aa7.01□□□□□ -1.29
SEMA3B-210ENST00000611067 KRTAP19-5Q3LI72 72 aa6.97□□□□□ -1.29
SEMA3B-210ENST00000611067 KMT2DO14686 5537 aa6.93□□□□□ -1.3
SEMA3B-210ENST00000611067 KRTAP9-2Q9BYQ4 174 aa6.93□□□□□ -1.3
SEMA3B-210ENST00000611067 KRTAP4-8A0A0G2JLE6 195 aa6.92□□□□□ -1.3
SEMA3B-210ENST00000611067 KRTAP4-8Q9BYQ9 185 aa6.92□□□□□ -1.3
SEMA3B-210ENST00000611067 FCGBPQ9Y6R7 5405 aaPredicted RBP6.84□□□□□ -1.31
SEMA3B-210ENST00000611067 KRTAP9-6A8MVA2 160 aa6.77□□□□□ -1.33
SEMA3B-210ENST00000611067 CRCT1Q9UGL9 99 aa6.71□□□□□ -1.34
SEMA3B-210ENST00000611067 KRTAP19-7Q3SYF9 63 aa6.7□□□□□ -1.34
SEMA3B-210ENST00000611067 KRTAP2-3P0C7H8 128 aa6.7□□□□□ -1.34
SEMA3B-210ENST00000611067 KRTAP2-4Q9BYR9 128 aa6.7□□□□□ -1.34
SEMA3B-210ENST00000611067 KRTAP2-1Q9BYU5 128 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms