RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 SPATA8Q6RVD6 105 aa12.54□□□□□ -0.4
HOXA4-204ENST00000610970 MT1HL1P0DM35 61 aa12.51□□□□□ -0.41
HOXA4-204ENST00000610970 XP32Q5T750 250 aa12.49□□□□□ -0.41
HOXA4-204ENST00000610970 A6NN06 94 aa12.46□□□□□ -0.41
HOXA4-204ENST00000610970 MIR22HGQ0VDD5 57 aa12.45□□□□□ -0.42
HOXA4-204ENST00000610970 DMBT1Q9UGM3 2413 aaPredicted RBP12.35□□□□□ -0.43
HOXA4-204ENST00000610970 HERC1Q15751 4861 aa12.34□□□□□ -0.43
HOXA4-204ENST00000610970 KTN1-AS1Q86SY8 53 aa12.34□□□□□ -0.43
HOXA4-204ENST00000610970 TPRXLQ17RH7 258 aa12.27□□□□□ -0.45
HOXA4-204ENST00000610970 J3QL48 77 aa12.25□□□□□ -0.45
HOXA4-204ENST00000610970 A0A1B0GU33 70 aa12.2□□□□□ -0.46
HOXA4-204ENST00000610970 H1FX-AS1Q4G0G2 97 aa12.17□□□□□ -0.46
HOXA4-204ENST00000610970 S4R3F8 94 aa12.11□□□□□ -0.47
HOXA4-204ENST00000610970 KRTAP3-3Q9BYR6 98 aa12.1□□□□□ -0.47
HOXA4-204ENST00000610970 H0YAA0 97 aa12.08□□□□□ -0.48
HOXA4-204ENST00000610970 RBM12B-AS1Q9P1G2 102 aa11.97□□□□□ -0.49
HOXA4-204ENST00000610970 HMCN2Q8NDA2 5059 aa11.93□□□□□ -0.5
HOXA4-204ENST00000610970 KRTAP10-6P60371 365 aaPredicted RBP11.91□□□□□ -0.5
HOXA4-204ENST00000610970 KRTAP3-2Q9BYR7 98 aa11.86□□□□□ -0.51
HOXA4-204ENST00000610970 SEC61BP60468 96 aaKnown RBP11.85□□□□□ -0.51
HOXA4-204ENST00000610970 K7ERS5 55 aa11.81□□□□□ -0.52
HOXA4-204ENST00000610970 CSAG1Q6PB30 78 aa11.77□□□□□ -0.52
HOXA4-204ENST00000610970 LPAP08519 4548 aa11.76□□□□□ -0.53
HOXA4-204ENST00000610970 ADM2Q7Z4H4 148 aa11.7□□□□□ -0.54
HOXA4-204ENST00000610970 PRAC1Q96KF2 57 aa11.69□□□□□ -0.54
HOXA4-204ENST00000610970 LRP2P98164 4655 aa11.67□□□□□ -0.54
HOXA4-204ENST00000610970 UBR4Q5T4S7 5183 aa11.67□□□□□ -0.54
HOXA4-204ENST00000610970 P0C880 135 aa11.66□□□□□ -0.54
HOXA4-204ENST00000610970 KRTAP13-4Q3LI77 160 aa11.64□□□□□ -0.55
HOXA4-204ENST00000610970 M0QZ58 72 aa11.52□□□□□ -0.57
HOXA4-204ENST00000610970 A0A0D9SG42 100 aa11.49□□□□□ -0.57
HOXA4-204ENST00000610970 KRTAP4-1Q9BYQ7 146 aa11.44□□□□□ -0.58
HOXA4-204ENST00000610970 ROMO1P60602 79 aa11.4□□□□□ -0.58
HOXA4-204ENST00000610970 RNF213Q63HN8 5207 aa11.39□□□□□ -0.59
HOXA4-204ENST00000610970 LINC01554Q52M75 96 aa11.35□□□□□ -0.59
HOXA4-204ENST00000610970 MUC17Q685J3 4493 aa11.34□□□□□ -0.59
HOXA4-204ENST00000610970 KRTAP25-1Q3LHN0 102 aa11.32□□□□□ -0.6
HOXA4-204ENST00000610970 KRTAP19-2Q3LHN2 52 aa11.29□□□□□ -0.6
HOXA4-204ENST00000610970 KRTAP12-1P59990 96 aa11.28□□□□□ -0.6
HOXA4-204ENST00000610970 KRTAP12-2P59991 146 aa11.26□□□□□ -0.61
HOXA4-204ENST00000610970 SPINT4Q6UDR6 99 aa11.2□□□□□ -0.62
HOXA4-204ENST00000610970 R4GN34 69 aa11.19□□□□□ -0.62
HOXA4-204ENST00000610970 MUC2Q02817 5179 aa11.13□□□□□ -0.63
HOXA4-204ENST00000610970 CRIPTQ9P021 101 aa11.01□□□□□ -0.65
HOXA4-204ENST00000610970 LORP23490 312 aaPredicted RBP10.97□□□□□ -0.65
HOXA4-204ENST00000610970 FLGP20930 4061 aaPredicted RBP10.8□□□□□ -0.68
HOXA4-204ENST00000610970 FAT4Q6V0I7 4981 aa10.76□□□□□ -0.69
HOXA4-204ENST00000610970 C10orf95Q9H7T3 257 aa10.75□□□□□ -0.69
HOXA4-204ENST00000610970 LCE2CQ5TA81 110 aa10.73□□□□□ -0.69
HOXA4-204ENST00000610970 LCE2AQ5TA79 106 aaPredicted RBP10.6□□□□□ -0.71
HOXA4-204ENST00000610970 CAMK2N1Q7Z7J9 78 aa10.58□□□□□ -0.72
HOXA4-204ENST00000610970 MT1HP80294 61 aa10.47□□□□□ -0.73
HOXA4-204ENST00000610970 M0R2T5 61 aa10.46□□□□□ -0.74
HOXA4-204ENST00000610970 SPRR2GQ9BYE4 73 aa10.43□□□□□ -0.74
HOXA4-204ENST00000610970 PP632Q6XCG6 107 aa10.36□□□□□ -0.75
HOXA4-204ENST00000610970 KRTAP19-1Q8IUB9 90 aa10.29□□□□□ -0.76
HOXA4-204ENST00000610970 PLAC4Q8WY50 150 aa10.27□□□□□ -0.77
HOXA4-204ENST00000610970 MT2AP02795 61 aa10.23□□□□□ -0.77
HOXA4-204ENST00000610970 KRTAP15-1Q3LI76 137 aa10.21□□□□□ -0.77
HOXA4-204ENST00000610970 TNP1P09430 55 aa10.21□□□□□ -0.78
HOXA4-204ENST00000610970 KRTAP10-10P60014 251 aa10.2□□□□□ -0.78
HOXA4-204ENST00000610970 KRTAP9-8Q9BYQ0 159 aa10.2□□□□□ -0.78
HOXA4-204ENST00000610970 KRTAP23-1A1A580 65 aa10.19□□□□□ -0.78
HOXA4-204ENST00000610970 MT1FP04733 61 aa10.18□□□□□ -0.78
HOXA4-204ENST00000610970 KRTAP9-2Q9BYQ4 174 aa10.17□□□□□ -0.78
HOXA4-204ENST00000610970 KRTAP19-8Q3LI54 63 aa10.04□□□□□ -0.8
HOXA4-204ENST00000610970 LCE2DQ5TA82 110 aaPredicted RBP9.95□□□□□ -0.82
HOXA4-204ENST00000610970 MT1BP07438 61 aa9.82□□□□□ -0.84
HOXA4-204ENST00000610970 KRTAP9-3Q9BYQ3 159 aa9.81□□□□□ -0.84
HOXA4-204ENST00000610970 FSIP2Q5CZC0 6907 aa9.79□□□□□ -0.84
HOXA4-204ENST00000610970 KRTAP9-6A0A140TA67 174 aa9.75□□□□□ -0.85
HOXA4-204ENST00000610970 NDUFAF8A1L188 74 aa9.71□□□□□ -0.85
HOXA4-204ENST00000610970 H3BS24 57 aa9.7□□□□□ -0.86
HOXA4-204ENST00000610970 KRTAP10-5P60370 271 aa9.66□□□□□ -0.86
HOXA4-204ENST00000610970 MT1XP80297 61 aa9.65□□□□□ -0.86
HOXA4-204ENST00000610970 CRCT1Q9UGL9 99 aa9.63□□□□□ -0.87
HOXA4-204ENST00000610970 LCE3AQ5TA76 89 aa9.59□□□□□ -0.87
HOXA4-204ENST00000610970 PRO2289Q9P1D8 64 aa9.53□□□□□ -0.88
HOXA4-204ENST00000610970 LUZP6Q538Z0 58 aa9.49□□□□□ -0.89
HOXA4-204ENST00000610970 KRTAP8-1Q8IUC2 63 aa9.48□□□□□ -0.89
HOXA4-204ENST00000610970 USH2AO75445 5202 aa9.47□□□□□ -0.89
HOXA4-204ENST00000610970 LCE2BO14633 110 aa9.46□□□□□ -0.89
HOXA4-204ENST00000610970 SPRR5A0A1B0GTR4 108 aa9.44□□□□□ -0.9
HOXA4-204ENST00000610970 KRTAP10-12P60413 245 aa9.4□□□□□ -0.9
HOXA4-204ENST00000610970 SSPOA2VEC9 5147 aa9.35□□□□□ -0.91
HOXA4-204ENST00000610970 KRTAP10-7P60409 375 aaPredicted RBP9.28□□□□□ -0.92
HOXA4-204ENST00000610970 KRTAP12-3P60328 96 aa9.22□□□□□ -0.93
HOXA4-204ENST00000610970 FCGBPQ9Y6R7 5405 aaPredicted RBP9.1□□□□□ -0.95
HOXA4-204ENST00000610970 KRTAP19-6Q3LI70 58 aa8.98□□□□□ -0.97
HOXA4-204ENST00000610970 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.97□□□□□ -0.97
HOXA4-204ENST00000610970 KRTAP19-5Q3LI72 72 aa8.88□□□□□ -0.99
HOXA4-204ENST00000610970 KRTAP9-7A8MTY7 169 aa8.8□□□□□ -1
HOXA4-204ENST00000610970 A0A0A0MQY5 61 aa8.77□□□□□ -1.01
HOXA4-204ENST00000610970 MACF1Q9UPN3 7388 aaKnown RBP8.75□□□□□ -1.01
HOXA4-204ENST00000610970 KRTAP4-8A0A0G2JLE6 195 aa8.71□□□□□ -1.01
HOXA4-204ENST00000610970 KRTAP4-8Q9BYQ9 185 aa8.71□□□□□ -1.01
HOXA4-204ENST00000610970 SYNE2Q8WXH0 6885 aaKnown RBP8.68□□□□□ -1.02
HOXA4-204ENST00000610970 LCE3CQ5T5A8 94 aa8.67□□□□□ -1.02
HOXA4-204ENST00000610970 KRTAP19-4Q3LI73 84 aa8.66□□□□□ -1.02
HOXA4-204ENST00000610970 KRTAP19-7Q3SYF9 63 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms