RNA–Protein interactions for RNA: ENST00000604036.1

FOCAD-211, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-211ENST00000604036 FAM236BA0A1B0GV22 79 aa11.15□□□□□ -0.62
FOCAD-211ENST00000604036 LCE2BO14633 110 aa11.15□□□□□ -0.62
FOCAD-211ENST00000604036 KRTAP3-3Q9BYR6 98 aa11.12□□□□□ -0.63
FOCAD-211ENST00000604036 USH2AO75445 5202 aa11.11□□□□□ -0.63
FOCAD-211ENST00000604036 A8MUN3 132 aa11.09□□□□□ -0.63
FOCAD-211ENST00000604036 SMIM20Q8N5G0 67 aa11.08□□□□□ -0.64
FOCAD-211ENST00000604036 TRAV7A0A075B6U4 112 aa11.06□□□□□ -0.64
FOCAD-211ENST00000604036 SSPOA2VEC9 5147 aa11.03□□□□□ -0.64
FOCAD-211ENST00000604036 NDUFC1O43677 76 aa11□□□□□ -0.65
FOCAD-211ENST00000604036 KRTAP19-1Q8IUB9 90 aa10.92□□□□□ -0.66
FOCAD-211ENST00000604036 DMAC1Q96GE9 116 aa10.9□□□□□ -0.66
FOCAD-211ENST00000604036 FCGBPQ9Y6R7 5405 aaPredicted RBP10.89□□□□□ -0.67
FOCAD-211ENST00000604036 SNURFQ9Y675 71 aa10.82□□□□□ -0.68
FOCAD-211ENST00000604036 SERP2Q8N6R1 65 aa10.8□□□□□ -0.68
FOCAD-211ENST00000604036 H0YAA0 97 aa10.78□□□□□ -0.68
FOCAD-211ENST00000604036 C20orf197Q8N268 126 aa10.75□□□□□ -0.69
FOCAD-211ENST00000604036 SPRR2GQ9BYE4 73 aa10.74□□□□□ -0.69
FOCAD-211ENST00000604036 ACYP2P14621 99 aa10.73□□□□□ -0.69
FOCAD-211ENST00000604036 ADM2Q7Z4H4 148 aa10.71□□□□□ -0.69
FOCAD-211ENST00000604036 KRTAP19-6Q3LI70 58 aa10.7□□□□□ -0.7
FOCAD-211ENST00000604036 CRIPTQ9P021 101 aa10.7□□□□□ -0.7
FOCAD-211ENST00000604036 MACF1Q9UPN3 7388 aaKnown RBP10.64□□□□□ -0.71
FOCAD-211ENST00000604036 SYNE2Q8WXH0 6885 aaKnown RBP10.63□□□□□ -0.71
FOCAD-211ENST00000604036 KRTAP19-8Q3LI54 63 aa10.62□□□□□ -0.71
FOCAD-211ENST00000604036 Q5VV11 94 aa10.62□□□□□ -0.71
FOCAD-211ENST00000604036 SPANXA2-OT1Q8N9U9 137 aa10.6□□□□□ -0.71
FOCAD-211ENST00000604036 MT1BP07438 61 aa10.59□□□□□ -0.71
FOCAD-211ENST00000604036 COX7CP15954 63 aa10.56□□□□□ -0.72
FOCAD-211ENST00000604036 CHKB-CPT1BH3BT56 60 aa10.55□□□□□ -0.72
FOCAD-211ENST00000604036 SPTSSBQ8NFR3 76 aa10.53□□□□□ -0.72
FOCAD-211ENST00000604036 P0C880 135 aa10.51□□□□□ -0.73
FOCAD-211ENST00000604036 KRTAP3-2Q9BYR7 98 aa10.45□□□□□ -0.74
FOCAD-211ENST00000604036 R4GN34 69 aa10.42□□□□□ -0.74
FOCAD-211ENST00000604036 KRTAP6-3Q3LI67 103 aa10.4□□□□□ -0.74
FOCAD-211ENST00000604036 ANAPC13Q9BS18 74 aa10.38□□□□□ -0.75
FOCAD-211ENST00000604036 A6NN06 94 aa10.36□□□□□ -0.75
FOCAD-211ENST00000604036 M0QZ58 72 aa10.35□□□□□ -0.75
FOCAD-211ENST00000604036 CYSTM1Q9H1C7 97 aa10.34□□□□□ -0.75
FOCAD-211ENST00000604036 H7BZZ5 65 aa10.32□□□□□ -0.76
FOCAD-211ENST00000604036 COA5Q86WW8 74 aa10.31□□□□□ -0.76
FOCAD-211ENST00000604036 KRTAP10-5P60370 271 aa10.28□□□□□ -0.76
FOCAD-211ENST00000604036 PLAC4Q8WY50 150 aa10.21□□□□□ -0.77
FOCAD-211ENST00000604036 LINC01554Q52M75 96 aa10.2□□□□□ -0.78
FOCAD-211ENST00000604036 CCDC179H3BU77 68 aa10.16□□□□□ -0.78
FOCAD-211ENST00000604036 PRO2289Q9P1D8 64 aa10.04□□□□□ -0.8
FOCAD-211ENST00000604036 SEC61GP60059 68 aa10.01□□□□□ -0.81
FOCAD-211ENST00000604036 MT1XP80297 61 aa10.01□□□□□ -0.81
FOCAD-211ENST00000604036 NEBP20929 6669 aa9.99□□□□□ -0.81
FOCAD-211ENST00000604036 SERP1Q9Y6X1 66 aa9.99□□□□□ -0.81
FOCAD-211ENST00000604036 KRTAP13-4Q3LI77 160 aa9.95□□□□□ -0.82
FOCAD-211ENST00000604036 ATP5EP56381 51 aaPredicted RBP9.92□□□□□ -0.82
FOCAD-211ENST00000604036 KRTAP20-1Q3LI63 56 aa9.9□□□□□ -0.82
FOCAD-211ENST00000604036 MUC12Q9UKN1 5478 aa9.86□□□□□ -0.83
FOCAD-211ENST00000604036 A0A1B0GU33 70 aa9.8□□□□□ -0.84
FOCAD-211ENST00000604036 A0A1B0GU69 56 aa9.78□□□□□ -0.84
FOCAD-211ENST00000604036 TMEM258P61165 79 aa9.78□□□□□ -0.84
FOCAD-211ENST00000604036 SPATA8Q6RVD6 105 aa9.75□□□□□ -0.85
FOCAD-211ENST00000604036 A0A0D9SG42 100 aa9.72□□□□□ -0.85
FOCAD-211ENST00000604036 KRTAP12-2P59991 146 aa9.69□□□□□ -0.86
FOCAD-211ENST00000604036 KRTAP5-9P26371 169 aa9.67□□□□□ -0.86
FOCAD-211ENST00000604036 CAMK2N1Q7Z7J9 78 aa9.64□□□□□ -0.87
FOCAD-211ENST00000604036 KMT2DO14686 5537 aa9.61□□□□□ -0.87
FOCAD-211ENST00000604036 PRR15LQ9BU68 103 aa9.58□□□□□ -0.88
FOCAD-211ENST00000604036 KRTAP10-7P60409 375 aaPredicted RBP9.57□□□□□ -0.88
FOCAD-211ENST00000604036 SPINT4Q6UDR6 99 aa9.56□□□□□ -0.88
FOCAD-211ENST00000604036 LINC01558Q9Y6Z2 57 aa9.55□□□□□ -0.88
FOCAD-211ENST00000604036 SMIM26A0A096LP01 95 aa9.53□□□□□ -0.88
FOCAD-211ENST00000604036 KRTAP8-1Q8IUC2 63 aa9.53□□□□□ -0.88
FOCAD-211ENST00000604036 KRTAP2-3P0C7H8 128 aa9.52□□□□□ -0.89
FOCAD-211ENST00000604036 KRTAP2-4Q9BYR9 128 aa9.52□□□□□ -0.89
FOCAD-211ENST00000604036 MDN1Q9NU22 5596 aa9.52□□□□□ -0.89
FOCAD-211ENST00000604036 KRTAP10-12P60413 245 aa9.51□□□□□ -0.89
FOCAD-211ENST00000604036 KRTAP12-1P59990 96 aa9.5□□□□□ -0.89
FOCAD-211ENST00000604036 KRTAP4-8A0A0G2JLE6 195 aa9.49□□□□□ -0.89
FOCAD-211ENST00000604036 KRTAP4-8Q9BYQ9 185 aa9.49□□□□□ -0.89
FOCAD-211ENST00000604036 A8MU10 97 aa9.45□□□□□ -0.9
FOCAD-211ENST00000604036 SPRR2FQ96RM1 72 aa9.45□□□□□ -0.9
FOCAD-211ENST00000604036 SPRR2EP22531 72 aa9.35□□□□□ -0.91
FOCAD-211ENST00000604036 SPRR2BP35325 72 aa9.35□□□□□ -0.91
FOCAD-211ENST00000604036 SPRR2AP35326 72 aa9.35□□□□□ -0.91
FOCAD-211ENST00000604036 UQCR11O14957 56 aa9.27□□□□□ -0.93
FOCAD-211ENST00000604036 PCP4P48539 62 aa9.2□□□□□ -0.94
FOCAD-211ENST00000604036 V9GYY9 64 aa9.2□□□□□ -0.94
FOCAD-211ENST00000604036 KRTAP2-2Q9BYT5 123 aa9.18□□□□□ -0.94
FOCAD-211ENST00000604036 KRTAP2-1Q9BYU5 128 aa9.18□□□□□ -0.94
FOCAD-211ENST00000604036 Q1T7F1 81 aa9.14□□□□□ -0.95
FOCAD-211ENST00000604036 PSPHP1O15172 72 aa9.13□□□□□ -0.95
FOCAD-211ENST00000604036 LCE1AQ5T7P2 110 aa9.13□□□□□ -0.95
FOCAD-211ENST00000604036 MIR22HGQ0VDD5 57 aa9.09□□□□□ -0.95
FOCAD-211ENST00000604036 SPRR2DP22532 72 aa9.05□□□□□ -0.96
FOCAD-211ENST00000604036 C10orf95Q9H7T3 257 aa9.05□□□□□ -0.96
FOCAD-211ENST00000604036 TNP1P09430 55 aa8.97□□□□□ -0.97
FOCAD-211ENST00000604036 RPS28P62857 69 aaKnown RBP8.96□□□□□ -0.98
FOCAD-211ENST00000604036 KRTAP19-7Q3SYF9 63 aa8.94□□□□□ -0.98
FOCAD-211ENST00000604036 K7ERS5 55 aa8.87□□□□□ -0.99
FOCAD-211ENST00000604036 A6NED7 52 aa8.84□□□□□ -0.99
FOCAD-211ENST00000604036 MT1EP04732 61 aa8.84□□□□□ -0.99
FOCAD-211ENST00000604036 LCE3BQ5TA77 95 aa8.83□□□□□ -1
FOCAD-211ENST00000604036 KRTAP19-5Q3LI72 72 aa8.82□□□□□ -1
FOCAD-211ENST00000604036 LCE3AQ5TA76 89 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms