RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 FAM236AA0A1B0GUQ0 79 aa9.29□□□□□ -0.92
SSBP4-210ENST00000601444 FAM236BA0A1B0GV22 79 aa9.29□□□□□ -0.92
SSBP4-210ENST00000601444 SSPOA2VEC9 5147 aa9.24□□□□□ -0.93
SSBP4-210ENST00000601444 TRAV7A0A075B6U4 112 aa9.22□□□□□ -0.93
SSBP4-210ENST00000601444 A8MUN3 132 aa9.22□□□□□ -0.93
SSBP4-210ENST00000601444 SMIM20Q8N5G0 67 aa9.22□□□□□ -0.93
SSBP4-210ENST00000601444 NDUFC1O43677 76 aa9.16□□□□□ -0.94
SSBP4-210ENST00000601444 KRTAP19-1Q8IUB9 90 aa9.14□□□□□ -0.95
SSBP4-210ENST00000601444 DMAC1Q96GE9 116 aa9.1□□□□□ -0.95
SSBP4-210ENST00000601444 SNURFQ9Y675 71 aa9.04□□□□□ -0.96
SSBP4-210ENST00000601444 SPRR2GQ9BYE4 73 aa9.02□□□□□ -0.97
SSBP4-210ENST00000601444 SERP2Q8N6R1 65 aa9.01□□□□□ -0.97
SSBP4-210ENST00000601444 H0YAA0 97 aa9□□□□□ -0.97
SSBP4-210ENST00000601444 KRTAP19-6Q3LI70 58 aa9□□□□□ -0.97
SSBP4-210ENST00000601444 FCGBPQ9Y6R7 5405 aaPredicted RBP8.98□□□□□ -0.97
SSBP4-210ENST00000601444 ADM2Q7Z4H4 148 aa8.97□□□□□ -0.97
SSBP4-210ENST00000601444 C20orf197Q8N268 126 aa8.96□□□□□ -0.98
SSBP4-210ENST00000601444 MT1BP07438 61 aa8.93□□□□□ -0.98
SSBP4-210ENST00000601444 ACYP2P14621 99 aa8.92□□□□□ -0.98
SSBP4-210ENST00000601444 KRTAP19-8Q3LI54 63 aa8.92□□□□□ -0.98
SSBP4-210ENST00000601444 CRIPTQ9P021 101 aa8.91□□□□□ -0.98
SSBP4-210ENST00000601444 Q5VV11 94 aa8.89□□□□□ -0.99
SSBP4-210ENST00000601444 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.88□□□□□ -0.99
SSBP4-210ENST00000601444 SPANXA2-OT1Q8N9U9 137 aa8.83□□□□□ -1
SSBP4-210ENST00000601444 P0C880 135 aa8.82□□□□□ -1
SSBP4-210ENST00000601444 COX7CP15954 63 aa8.82□□□□□ -1
SSBP4-210ENST00000601444 KRTAP3-2Q9BYR7 98 aa8.8□□□□□ -1
SSBP4-210ENST00000601444 CHKB-CPT1BH3BT56 60 aa8.76□□□□□ -1.01
SSBP4-210ENST00000601444 SPTSSBQ8NFR3 76 aa8.74□□□□□ -1.01
SSBP4-210ENST00000601444 CYSTM1Q9H1C7 97 aa8.7□□□□□ -1.02
SSBP4-210ENST00000601444 A6NN06 94 aa8.68□□□□□ -1.02
SSBP4-210ENST00000601444 KRTAP9-7A8MTY7 169 aa8.68□□□□□ -1.02
SSBP4-210ENST00000601444 R4GN34 69 aa8.68□□□□□ -1.02
SSBP4-210ENST00000601444 ANAPC13Q9BS18 74 aa8.66□□□□□ -1.02
SSBP4-210ENST00000601444 M0QZ58 72 aa8.64□□□□□ -1.03
SSBP4-210ENST00000601444 KRTAP10-5P60370 271 aa8.64□□□□□ -1.03
SSBP4-210ENST00000601444 MACF1Q9UPN3 7388 aaKnown RBP8.63□□□□□ -1.03
SSBP4-210ENST00000601444 H7BZZ5 65 aa8.63□□□□□ -1.03
SSBP4-210ENST00000601444 COA5Q86WW8 74 aa8.59□□□□□ -1.03
SSBP4-210ENST00000601444 LINC01554Q52M75 96 aa8.53□□□□□ -1.04
SSBP4-210ENST00000601444 CCDC179H3BU77 68 aa8.51□□□□□ -1.05
SSBP4-210ENST00000601444 SYNE2Q8WXH0 6885 aaKnown RBP8.51□□□□□ -1.05
SSBP4-210ENST00000601444 PLAC4Q8WY50 150 aa8.5□□□□□ -1.05
SSBP4-210ENST00000601444 MT1XP80297 61 aa8.44□□□□□ -1.06
SSBP4-210ENST00000601444 KRTAP13-4Q3LI77 160 aa8.37□□□□□ -1.07
SSBP4-210ENST00000601444 KRTAP6-3Q3LI67 103 aa8.36□□□□□ -1.07
SSBP4-210ENST00000601444 PRO2289Q9P1D8 64 aa8.35□□□□□ -1.07
SSBP4-210ENST00000601444 SEC61GP60059 68 aa8.3□□□□□ -1.08
SSBP4-210ENST00000601444 SERP1Q9Y6X1 66 aa8.29□□□□□ -1.08
SSBP4-210ENST00000601444 ATP5EP56381 51 aaPredicted RBP8.24□□□□□ -1.09
SSBP4-210ENST00000601444 SPATA8Q6RVD6 105 aa8.17□□□□□ -1.1
SSBP4-210ENST00000601444 A0A1B0GU33 70 aa8.16□□□□□ -1.1
SSBP4-210ENST00000601444 TMEM258P61165 79 aa8.15□□□□□ -1.1
SSBP4-210ENST00000601444 A0A1B0GU69 56 aa8.13□□□□□ -1.11
SSBP4-210ENST00000601444 KMT2DO14686 5537 aa8.13□□□□□ -1.11
SSBP4-210ENST00000601444 A0A0D9SG42 100 aa8.12□□□□□ -1.11
SSBP4-210ENST00000601444 KRTAP12-2P59991 146 aa8.12□□□□□ -1.11
SSBP4-210ENST00000601444 KRTAP5-9P26371 169 aa8.1□□□□□ -1.11
SSBP4-210ENST00000601444 KRTAP10-7P60409 375 aaPredicted RBP8.08□□□□□ -1.12
SSBP4-210ENST00000601444 KRTAP4-8A0A0G2JLE6 195 aa8.03□□□□□ -1.12
SSBP4-210ENST00000601444 KRTAP4-8Q9BYQ9 185 aa8.03□□□□□ -1.12
SSBP4-210ENST00000601444 MUC12Q9UKN1 5478 aa8.02□□□□□ -1.12
SSBP4-210ENST00000601444 CAMK2N1Q7Z7J9 78 aa8.02□□□□□ -1.13
SSBP4-210ENST00000601444 KRTAP10-12P60413 245 aa8□□□□□ -1.13
SSBP4-210ENST00000601444 KRTAP8-1Q8IUC2 63 aa7.99□□□□□ -1.13
SSBP4-210ENST00000601444 SPINT4Q6UDR6 99 aa7.97□□□□□ -1.13
SSBP4-210ENST00000601444 LINC01558Q9Y6Z2 57 aa7.97□□□□□ -1.13
SSBP4-210ENST00000601444 KRTAP12-1P59990 96 aa7.96□□□□□ -1.14
SSBP4-210ENST00000601444 PRR15LQ9BU68 103 aa7.95□□□□□ -1.14
SSBP4-210ENST00000601444 SPRR2FQ96RM1 72 aa7.94□□□□□ -1.14
SSBP4-210ENST00000601444 A8MU10 97 aa7.93□□□□□ -1.14
SSBP4-210ENST00000601444 NEBP20929 6669 aa7.93□□□□□ -1.14
SSBP4-210ENST00000601444 SMIM26A0A096LP01 95 aa7.91□□□□□ -1.14
SSBP4-210ENST00000601444 MDN1Q9NU22 5596 aa7.85□□□□□ -1.15
SSBP4-210ENST00000601444 SPRR2EP22531 72 aa7.76□□□□□ -1.17
SSBP4-210ENST00000601444 SPRR2BP35325 72 aa7.76□□□□□ -1.17
SSBP4-210ENST00000601444 SPRR2AP35326 72 aa7.76□□□□□ -1.17
SSBP4-210ENST00000601444 UQCR11O14957 56 aa7.71□□□□□ -1.18
SSBP4-210ENST00000601444 LCE1AQ5T7P2 110 aa7.71□□□□□ -1.18
SSBP4-210ENST00000601444 PCP4P48539 62 aa7.7□□□□□ -1.18
SSBP4-210ENST00000601444 V9GYY9 64 aa7.65□□□□□ -1.18
SSBP4-210ENST00000601444 Q1T7F1 81 aa7.64□□□□□ -1.19
SSBP4-210ENST00000601444 PSPHP1O15172 72 aa7.62□□□□□ -1.19
SSBP4-210ENST00000601444 KRTAP20-1Q3LI63 56 aa7.62□□□□□ -1.19
SSBP4-210ENST00000601444 C10orf95Q9H7T3 257 aa7.6□□□□□ -1.19
SSBP4-210ENST00000601444 MIR22HGQ0VDD5 57 aa7.57□□□□□ -1.2
SSBP4-210ENST00000601444 KRTAP19-7Q3SYF9 63 aa7.54□□□□□ -1.2
SSBP4-210ENST00000601444 RPS28P62857 69 aaKnown RBP7.5□□□□□ -1.21
SSBP4-210ENST00000601444 KRTAP2-3P0C7H8 128 aa7.49□□□□□ -1.21
SSBP4-210ENST00000601444 SPRR2DP22532 72 aa7.49□□□□□ -1.21
SSBP4-210ENST00000601444 KRTAP2-4Q9BYR9 128 aa7.49□□□□□ -1.21
SSBP4-210ENST00000601444 TNP1P09430 55 aa7.46□□□□□ -1.22
SSBP4-210ENST00000601444 MT1EP04732 61 aa7.45□□□□□ -1.22
SSBP4-210ENST00000601444 KRTAP19-5Q3LI72 72 aa7.43□□□□□ -1.22
SSBP4-210ENST00000601444 LCE3AQ5TA76 89 aa7.39□□□□□ -1.23
SSBP4-210ENST00000601444 A6NED7 52 aa7.35□□□□□ -1.23
SSBP4-210ENST00000601444 K7ERS5 55 aa7.34□□□□□ -1.23
SSBP4-210ENST00000601444 KRTAP19-3Q7Z4W3 81 aa7.31□□□□□ -1.24
SSBP4-210ENST00000601444 LCE5AQ5TCM9 118 aa7.3□□□□□ -1.24
SSBP4-210ENST00000601444 LCE3BQ5TA77 95 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms